!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A 
!perturbation	miR1 
!time	3 day culture
!gene	PTPN11 (SHP2)
!entrez gene	5781
!disease	Breast cancer
!end_metadata
LTF	0.107924
RHCG	-0.071196
CHRNA9	-0.063431
C1S	0.063103
NT5E	-0.058227
GABRA2	-0.055934
SFTPD	0.053684
PRDM1	-0.052169
ADH1B	0.051652
RPSAP52	-0.051208
KRT10	0.051060
KRT15	0.049247
CHI3L1	0.048946
RP1	-0.047524
C1R	0.047237
SPRY4	-0.045295
CYP1B1	0.044028
FBXO32	0.043443
SAA2	0.043145
CASP14	-0.042351
INSC	-0.042278
OSBP2	-0.042203
C10orf10	-0.041650
ITPKA	-0.041462
INHBA	-0.040610
AQP9	-0.040574
KRT16	0.039610
SPINK6	-0.039592
TEK	-0.039512
SLC2A3	-0.039217
ITGA5	-0.039138
PTPN11	-0.039102
EHF	0.038714
CNTN3	-0.038540
ETS2	0.038526
BBOX1	0.038115
SERPINE1	-0.037999
ANGPTL4	-0.037972
TGFBR3	0.037924
PRR15L	0.036088
EREG	-0.035902
CYFIP2	0.035347
NRIP1	-0.035321
TMEM156	-0.035258
PDK4	0.035134
DAW1	-0.035112
ABCC2	0.034634
SKIL	-0.034470
FAM83A	-0.033975
GCNT4	-0.033872
KLF7	-0.033847
IL1R1	0.033815
IL1B	-0.033710
CFB	0.033596
KDELR3	-0.033569
ACSL5	0.033496
SPX	-0.033486
SAA1	0.033247
SULT1B1	-0.032984
MAP4K4	-0.032932
BCAP29	-0.032783
TMEM194B	-0.032639
ETNK2	0.032511
AREG	-0.032509
CCDC69	0.032169
CCL20	-0.031983
STAT4	-0.031938
AHR	0.031770
OAS1	0.031550
PITPNC1	-0.031387
LAMC2	-0.031341
KRT17	0.031240
F3	-0.031236
CYP4B1	0.031093
VLDLR	-0.031034
P4HA3	-0.030971
B3GNT2	-0.030953
LAMB3	-0.030941
SNAI2	-0.030932
EFNB2	-0.030913
THBD	-0.030704
SAMSN1	-0.030570
TLR3	0.030559
DAB2	-0.030495
DCBLD2	-0.030368
METTL7A	0.030011
MBOAT2	-0.030000
ERBB3	-0.029992
HTR1D	-0.029941
ADH1C	0.029932
SELENBP1	0.029893
ADAMTS6	-0.029675
PCDHB8	0.029636
MIR4697HG	-0.029627
ANXA3	-0.029609
BCL6	0.029415
DUSP4	-0.029414
SAA4	0.029355
ALDH3A1	0.029267
ENKUR	-0.029226
CDCP1	-0.029186
DNAJB5	-0.029149
CXADR	0.029106
RAPH1	-0.029085
SNTB1	0.029010
ENO2	-0.028999
APMAP	0.028934
SERPINA3	0.028933
ZNF219	0.028894
ASAP2	-0.028787
PDZK1IP1	0.028660
TREM1	-0.028400
NGEF	-0.028117
PSMB9	0.027813
ITPR1	-0.027781
MIR29B2	0.027672
SMOC1	-0.027652
NAV1	-0.027652
FAM65B	0.027624
CCDC88A	-0.027488
CADM3	0.027384
ATG16L1	-0.027378
TNFSF10	0.027373
TSPAN1	0.027307
PLD5	-0.027265
UBA7	0.027212
C3AR1	-0.027191
LEPREL4	-0.027118
STK17A	-0.026977
TRPC1	-0.026934
GLDC	0.026800
KCNK5	0.026704
ACKR1	0.026689
GCNT1	-0.026671
MIR21	-0.026477
SUSD2	0.026448
CCBE1	-0.026430
FAM20C	-0.026371
MALL	-0.026219
FUT8	-0.026199
LOXL2	-0.026138
PLAU	-0.026121
MYO10	-0.026106
GLUL	0.026106
MYO1B	-0.026101
PGM3	-0.025985
ANTXR2	-0.025819
ELOVL4	-0.025730
TGM2	-0.025726
MCF2	-0.025693
KCNIP3	0.025625
SLC26A2	-0.025580
DEPTOR	0.025536
IFI44L	0.025487
ZFP36L1	-0.025468
BTN3A3	0.025465
MLLT11	-0.025406
FAAH2	0.025330
CLDN12	-0.025293
ATP2C2	-0.025268
IGFBP6	-0.025181
LPXN	-0.025178
FARP1	-0.025167
EFTUD1	-0.025132
SEPP1	0.025102
RAI14	-0.025081
TGFA	-0.025064
ORM1	0.024982
ETV4	-0.024967
CLMP	-0.024952
MCF2L2	-0.024935
HMGA2	-0.024905
SH3RF2	0.024828
CEP170	-0.024825
ADH1A	0.024593
CASP1	0.024406
GK3P	-0.024290
JARID2	-0.024236
SLAMF9	-0.024226
CXCR1	0.024085
LCE1C	0.024030
CYBRD1	0.023978
PGM2L1	-0.023977
ATP13A3	-0.023963
JMJD1C	-0.023939
SLC27A2	0.023900
ADM	-0.023891
GBP2	0.023855
PLEK2	-0.023793
AKR1B10	0.023790
SYN3	0.023776
MAL2	0.023713
COQ10B	-0.023684
FAM126A	-0.023682
TACC2	0.023596
PTPN12	-0.023518
EFEMP1	0.023454
FLJ45950	0.023454
NFIL3	0.023422
SH2D2A	-0.023415
RPGR	-0.023408
STXBP1	-0.023394
BMP2	-0.023374
CD14	0.023317
CCDC171	0.023246
GGT5	0.023231
TANC2	-0.023207
FGFR3	0.023203
GK	-0.023187
NAV2	-0.023117
LRRC8C	-0.023082
MT1M	0.023040
IKBIP	-0.023021
SULF1	0.022979
SLC7A5	0.022971
SRPX2	-0.022884
SLC2A6	0.022849
FGD6	-0.022820
ZC2HC1A	-0.022817
FAM114A1	-0.022770
CA12	-0.022699
EVI2B	-0.022673
HIPK2	-0.022628
FZD4	0.022627
CSF3	-0.022580
SERPINB5	-0.022579
TMEM40	0.022560
MSMO1	-0.022516
MYO5A	-0.022484
WNT5A	-0.022470
SMPDL3B	0.022465
TMC4	0.022443
ASS1	0.022397
STXBP5	-0.022382
PLXNA2	-0.022370
SGK1	0.022348
ERO1L	-0.022347
LEPREL1	-0.022337
MCM8	-0.022302
PNLIPRP3	-0.022216
VAV3	0.022190
TLR2	-0.022129
CLU	0.022113
PPL	0.022056
FXYD3	0.022048
GRAMD1B	-0.022032
HERC3	-0.021982
LRIG3	0.021887
FBN1	-0.021885
DHRS3	-0.021867
HIST3H2A	0.021776
CSF1R	-0.021769
ASAP1	-0.021732
DUSP6	-0.021670
SEC24D	-0.021670
EPHA2	-0.021658
PHLDA1	-0.021569
ADAM12	-0.021540
GAB3	-0.021432
RDH16	0.021431
ST3GAL6	0.021412
SLC25A53	0.021407
CALU	-0.021248
STC1	-0.021239
MPHOSPH6	-0.021205
TMPRSS3	0.021200
CTSV	-0.021191
KATNAL1	-0.021191
NEDD4	-0.021185
L3MBTL3	-0.021138
USP53	-0.021130
MLPH	-0.021033
HOOK3	-0.021031
VEGFA	-0.021003
PMEPA1	-0.020997
TMEFF1	-0.020971
IFITM1	0.020954
BTG2	0.020925
CNKSR3	0.020907
RALGPS2	-0.020890
GMEB1	-0.020824
FGR	0.020818
MCL1	-0.020772
ZSWIM6	-0.020770
IFIH1	0.020758
STAM2	-0.020697
FAM177A1	-0.020696
ZNF91	-0.020692
IL1A	-0.020665
PCDHB12	0.020651
SPRR1B	0.020638
TRIP11	-0.020603
ELK3	-0.020602
TSPAN5	-0.020546
IRF1	0.020537
KRT14	0.020489
TRMT6	-0.020482
C5AR2	-0.020477
TBC1D2B	0.020460
GPR180	-0.020454
PPFIBP2	0.020410
EHD4	-0.020410
ETS1	-0.020391
DUSP5	-0.020339
ME1	-0.020334
RASA1	-0.020333
KIAA2026	-0.020304
GPNMB	0.020293
NEK1	-0.020256
IRS2	-0.020190
PHF20	-0.020177
PRLHR	0.020155
EGR1	-0.020149
PALMD	0.020144
IRAK2	-0.020123
NCF2	-0.020083
SUCO	-0.020079
TIGD3	0.020065
CXCL3	-0.020050
ARNTL2	-0.020029
IGFBP3	-0.020004
DPY19L2	-0.019975
CHI3L2	0.019958
FBXO45	-0.019933
B3GNT5	-0.019923
TPBG	-0.019923
CAPRIN2	-0.019873
RNF150	0.019854
MPRIP	-0.019851
SNORD38B	-0.019837
CLMN	0.019812
PHKA1	-0.019807
RPL23AP53	-0.019787
DMBT1	-0.019783
VSNL1	0.019779
OLAH	-0.019749
SOAT1	-0.019725
ATP11A	-0.019687
HIST1H2AG	0.019684
ZAR1	0.019640
AMMECR1L	-0.019629
AKR1C3	0.019615
MICAL2	-0.019609
DSEL	0.019584
ANLN	-0.019575
EGLN3	-0.019541
PTPLB	0.019539
KIF2A	-0.019528
FN1	-0.019526
IWS1	-0.019511
SNORA22	0.019482
XCR1	0.019440
LIFR	0.019421
SLC44A3	0.019414
UST	-0.019405
FHOD3	-0.019405
EFNA1	0.019336
G2E3	-0.019294
NCS1	-0.019288
DSC3	0.019286
CYP39A1	0.019264
ACADSB	0.019246
RHOB	-0.019241
COPS8	-0.019229
TUBA1A	-0.019213
PINLYP	0.019213
SNORD78	-0.019213
MILR1	-0.019201
SNORD42B	-0.019197
RBMXL2	-0.019195
TMSB4X	-0.019190
IL31RA	-0.019189
SNORD14E	-0.019188
SLC43A2	0.019187
CA11	0.019183
STRA6	-0.019155
ETV5	-0.019146
CPEB4	-0.019137
PPP1R3B	-0.019082
STK10	-0.019071
ANPEP	-0.019048
ALDH3A2	0.019012
ARHGDIB	-0.019005
FRMD4B	-0.019000
GALNT6	-0.018994
KDELC1	-0.018977
C1RL	0.018971
SOX4	-0.018971
RBMY2EP	0.018931
SOWAHB	0.018926
OR13C4	0.018880
NAV3	-0.018862
CDCA7L	0.018857
SNORD50B	-0.018841
ARHGAP12	-0.018834
NOTCH1	0.018822
DIXDC1	-0.018814
DMTF1	-0.018805
LARP6	-0.018805
CPVL	0.018803
KRTAP27-1	-0.018783
CACNB2	0.018779
DOCK11	-0.018772
DYNLT3	-0.018751
AOC2	-0.018743
KIN	-0.018707
CD59	-0.018684
FERMT2	-0.018651
KLRC1	0.018606
INSIG2	-0.018604
TMEM99	0.018601
CDKL5	-0.018593
GJD3	0.018569
ZUFSP	-0.018561
HDGFRP3	-0.018554
ADCY7	-0.018545
MAP2K6	0.018531
BHLHE40	-0.018467
C1orf21	0.018453
UGT2B7	0.018441
VAMP4	-0.018439
SGTB	-0.018427
SESTD1	-0.018409
SACS	-0.018402
ERGIC2	-0.018399
SPARC	-0.018398
NR1H3	0.018379
CXCL8	-0.018374
CFH	0.018363
GRAMD2	0.018357
VSTM2L	-0.018356
NRIP3	-0.018348
PYGO2	-0.018316
KIF13B	-0.018314
EPHX1	0.018299
AMIGO2	-0.018295
ARHGAP32	-0.018290
CYP3A4	0.018251
ROCK1	-0.018235
IREB2	-0.018204
SMCO1	0.018200
MAPK14	-0.018183
DSG3	0.018159
LRP12	-0.018116
AOC1	-0.018109
BLNK	0.018097
KCNJ15	-0.018094
C2orf15	0.018087
TMEM164	-0.018063
DDB2	0.018059
MARCH9	0.018056
APOL2	0.018050
IFI30	0.018047
LPIN1	0.018043
PCDHB14	0.018020
STARD3NL	-0.018005
PCSK1	0.017983
CD70	0.017979
ZDHHC8P1	0.017976
PFKFB4	-0.017960
GPR64	-0.017957
RAB30	0.017924
HIST1H1B	0.017920
PFKP	-0.017919
TIMP3	-0.017913
UBQLN3	0.017905
RNF180	-0.017902
SLC9A7	-0.017890
GNB4	-0.017881
LYAR	-0.017879
MICAL1	-0.017864
MRGPRX3	-0.017849
FLNB	-0.017818
C15orf59	0.017760
MSRB1	0.017751
ANKIB1	-0.017737
DOCK5	-0.017724
FDX1	-0.017702
ID1	-0.017664
IER3	-0.017649
NSRP1	-0.017604
RASAL2	-0.017590
PLAC8	0.017580
LRRC40	-0.017575
RNF144B	0.017551
LTBP1	-0.017536
PPRC1	-0.017524
SYNE2	0.017522
CLDN1	0.017514
WDR47	-0.017513
YEATS2	-0.017503
JRK	-0.017493
MOSPD2	-0.017469
CDK14	-0.017468
SNORD79	-0.017460
EPB41L2	-0.017453
KLF12	-0.017441
ZNF135	0.017414
LOC100131581	0.017413
IL1R2	0.017410