!direction 0 !num_genes 500 !diffexp_method chdir !cutoff 500 !correction_method None !threshold None !organism Mus musculus !ligand_name retinoic acid !ligand_id CHEBI:26536 !cell_type CD4+ T cells pooled from spleen and mesenteric/peripheral lymph nodes !organism mouse !end_metadata H2AFX 0.157859 UBE2C 0.156761 BIRC5 0.136484 KPNA2 0.132144 PCNA 0.117707 TUBB 0.106862 CKS2 0.105883 CKS1B 0.102532 CDK1 0.102241 STMN1 0.097081 CDCA8 0.096060 CCNB2 0.092545 C11orf31 0.088881 LGALS1 0.088769 ARL6IP1 0.085653 EEF1A1 -0.085479 ECM1 -0.084942 GBP6 -0.084865 CCNA2 0.084051 TUBA1B 0.079499 RRM2 0.078035 SELL -0.076407 MKI67 0.075959 CHCHD10 0.074707 HINT1 0.069984 CTSS -0.069495 RPL3 -0.068792 CCR7 -0.068771 TUBA1A 0.068375 CDC20 0.067720 STAT1 -0.067097 HMHA1 -0.066822 IMPDH2 0.066693 RPL18A -0.066558 FBXO5 0.066098 BTG1 -0.066082 MAD2L1 0.065967 H2AFV 0.065882 RPL13 -0.064380 RPS23 -0.063788 RPS28 -0.063327 ASF1B 0.063075 RPL7A -0.062413 RPS12 -0.062248 RPLP2 -0.061811 RPS29 -0.059469 EIF5A -0.058225 RPL6 -0.056368 COX7A2 0.055578 EMP3 0.055515 PTPRC -0.054408 BANF1 0.053865 BTLA -0.053025 NCAPH 0.052874 LSM3 0.052785 UQCRFS1 0.052712 EIF4A2 -0.052680 RPLP0 -0.052059 CTSD -0.051579 CRIP1 0.051178 RPL38 -0.050998 MSN -0.050613 SAT1 -0.050378 EGR1 -0.050257 NPC2 -0.050048 NLRC5 -0.049722 RNF213 -0.049284 RPS24 -0.049186 CCND2 -0.049173 TOP2A 0.048391 CLK1 -0.047701 USP18 -0.047061 MCM7 0.046863 CKAP2 0.046688 RPL10A -0.046661 PBK 0.046537 PLK1 0.046116 LSM4 0.046096 IRF1 -0.046025 PSME1 -0.045854 LGALS3 -0.045803 SAMHD1 -0.045758 DEK 0.045612 SLA -0.045608 DNAJC9 0.045528 DDIT4 0.045431 SEPW1 -0.045166 CCNB1 0.044564 RPL19 -0.044150 MYB -0.043982 NUF2 0.043978 CDCA5 0.043682 ITM2A -0.043573 UBE2S 0.043285 GIMAP4 -0.043085 AHCY 0.042987 ZFP36 -0.042824 LGALS3BP -0.042772 SHCBP1 0.042439 FEN1 0.042431 SELPLG -0.041925 SAMD9L -0.041865 IFIT3 -0.041648 PARP9 -0.041452 ATP6V0C -0.041292 SH2D2A -0.041099 RPS7 -0.041066 CD2 -0.041065 TAPBP -0.041043 IER2 -0.041018 RPS26 -0.040948 RPL27 -0.040898 RPL26 -0.040897 H2AFZ 0.040794 NCAPD2 0.040781 NUSAP1 0.040559 TCP11L2 -0.040146 FAM64A 0.040027 KIAA0101 0.039938 RDM1 0.039908 GBP2 -0.039830 MCL1 -0.039399 IRGM -0.039348 FTH1 -0.039196 IFI35 -0.038880 GMNN 0.038756 PIK3IP1 -0.038741 ARID5A -0.038588 EEF1B2 -0.038487 ATP5J 0.038362 IRF9 -0.038332 TK1 0.038328 LYZ -0.038325 ANAPC5 0.038204 ARHGAP11A 0.038187 HN1 0.037840 GPR18 -0.037661 KLHL6 -0.037385 ICOS -0.037147 INCENP 0.037138 DTX3L -0.037021 DAXX -0.037005 JAK1 -0.036910 RPS20 -0.036345 LGALS9B -0.036246 SSH2 -0.035972 TMBIM6 -0.035953 CTLA4 -0.035797 CCNL1 -0.035795 PIM2 -0.035778 SPC24 0.035617 RTP4 -0.035459 FAU -0.035272 RPS27A -0.035089 ITGB2 -0.034942 GPSM3 -0.034819 CNBP -0.034725 NCAPG2 0.034466 RPL23 -0.034121 TPT1 -0.033877 C4orf27 0.033703 VPS37B -0.033664 TRIM25 -0.033578 RPS5 -0.033343 AURKB 0.033316 PTPN22 -0.033231 LSP1 -0.033138 GABARAP -0.033101 LSM5 0.033085 LAT -0.033003 SARS 0.032867 ITGAL -0.032748 NRN1 0.032733 RPL13A -0.032644 ZBP1 -0.032498 ADRBK1 -0.032451 PLAC8 -0.032445 SNX17 -0.032420 KIF20A 0.032354 GRAMD1A -0.032265 SASH3 -0.032110 RPL7 -0.031994 RASAL3 -0.031991 CDKN3 0.031986 S1PR1 -0.031927 PRKCQ -0.031913 PSMB7 0.031809 TPRG1L -0.031776 S100A13 0.031685 CYTIP -0.031311 HMGB2 0.031150 KIAA1551 -0.031134 NR4A1 -0.031103 PSAT1 0.031091 RPL21 -0.031073 TIPIN 0.031069 KMT2A -0.031043 LRP10 -0.030979 NDC80 0.030975 TPR -0.030960 RPL4 -0.030946 GRAMD3 -0.030878 ZFP36L1 -0.030840 EZH2 0.030699 FAM173A 0.030669 CDKN2C 0.030636 ARHGDIA -0.030564 TBC1D10C -0.030444 SHISA5 -0.030430 PRC1 0.030423 RPL28 -0.030390 RPS10 -0.030351 IFIT1B -0.030313 EIF4A1 -0.030278 ITGA6 -0.030156 HELZ2 -0.029954 YPEL3 -0.029866 STK4 -0.029863 LAPTM5 -0.029837 CCL4 -0.029804 GPX4 0.029795 BCL11B -0.029650 TNFAIP8L1 0.029572 ETS1 -0.029553 HECA -0.029537 KLF2 -0.029473 LAG3 -0.029455 IRF7 -0.029427 CPA3 -0.029309 PLD3 -0.029187 CBFB 0.029165 RRM1 0.029162 EIF3A -0.029148 NACA -0.029137 RASSF5 -0.029093 RPL9 -0.029081 NFKBIA -0.029047 GIMAP1-GIMAP5 -0.028892 IFI16 -0.028685 CYFIP2 -0.028621 FTL -0.028553 CDCA3 0.028536 NAP1L1 0.028506 CENPA 0.028501 RFC5 0.028446 FDPS 0.028410 CSDE1 -0.028355 PRKCH -0.028343 IFIT1 -0.028330 ITGB7 -0.028318 RNF145 -0.028293 HDAC7 -0.028277 PSME2 -0.028117 GPR171 -0.028048 EIF3C -0.027606 RBM38 -0.027517 PFN1 0.027500 VASP -0.027482 MCM5 0.027460 SLPI -0.027445 RPS4Y1 -0.027291 QRICH1 -0.027140 TRIB2 -0.027130 CCL3L3 -0.027092 SRM -0.027073 ACTB -0.026943 SEPT9 -0.026823 RPL18 -0.026723 STK17B -0.026714 RPS27L 0.026645 HPRT1 0.026526 SESN3 -0.026521 CDT1 0.026520 RNF26 0.026431 JUNB -0.026418 SLC3A2 -0.026414 BRD2 -0.026301 RAD51 0.026177 HECTD1 -0.026167 NDUFA4 0.026035 IDH3G 0.025819 RPS8 -0.025742 RGS1 -0.025705 UBR4 -0.025685 TYROBP -0.025661 VCP -0.025527 B2M -0.025482 COX6A1 0.025467 LY6E -0.025410 SIDT2 -0.025342 CYB5A -0.025327 PRIM1 0.025247 EIF3F 0.025105 RPS2 -0.025089 SPC25 0.025028 CLPTM1L -0.024960 WBP5 0.024949 PSAP -0.024911 TPI1 0.024773 HNRNPK -0.024704 LTA -0.024692 AURKA 0.024625 TIMM23 -0.024624 ABLIM1 -0.024573 PPIB 0.024532 UBALD2 0.024466 XAF1 -0.024427 NDUFC2 0.024379 DHX15 -0.024309 C14orf2 0.024287 IL7R -0.024286 CENPM 0.024188 TXN 0.024106 HAUS3 0.024026 NOTCH1 -0.023988 CEP55 0.023973 TRIM6-TRIM34 -0.023966 LDB1 -0.023746 UBE2T 0.023742 PLP2 0.023724 TAB2 -0.023724 CCR9 0.023700 WNK1 -0.023662 HMGCS1 0.023620 RASA3 -0.023605 KIF18B 0.023586 TACC3 0.023532 RELA -0.023527 CORO1A -0.023495 EVL -0.023435 IRF4 -0.023383 DUSP2 -0.023329 SQSTM1 -0.023321 JUND -0.023311 NUP37 0.023302 CD27 -0.023293 IL17RA -0.023245 TP53INP1 -0.023222 SLBP 0.023175 DDX5 -0.023041 LMNB1 0.023009 ACIN1 -0.022926 NDUFV2 0.022911 RPS19 0.022881 CRLF3 -0.022877 ARHGEF1 -0.022798 GNB2L1 -0.022752 TBXA2R -0.022739 AGO2 -0.022649 C1QBP -0.022595 LEF1 -0.022577 CISH -0.022532 HIF1A -0.022512 FAM102A -0.022456 CDC123 0.022440 ESPL1 0.022400 WIPF1 -0.022376 RPS21 -0.022301 EIF3E -0.022293 CD3E -0.022286 LCP1 -0.022282 DEPDC1B 0.022278 JTB -0.022252 TUBB4B 0.022182 BUB1B 0.022167 DENND2D -0.022126 IVNS1ABP -0.022095 IL6R -0.022083 IKZF1 -0.022083 SNRPB 0.022052 BAX 0.022031 SMC1A 0.022031 DUSP5 -0.021998 JAK2 -0.021961 SATB1 -0.021949 CENPE 0.021940 ATP5B -0.021902 NDUFB11 0.021818 NME2 0.021816 KCNN4 -0.021798 ACTN1 -0.021687 PISD -0.021650 RP9 0.021645 FKBP2 0.021640 C15orf48 -0.021634 WAS -0.021595 CKAP2L 0.021577 ZNF281 -0.021559 HSPA5 -0.021508 CORO1B -0.021482 KIF11 0.021423 UBC -0.021403 RHOG -0.021391 RPL10 -0.021362 PRPF8 -0.021302 NCAPG 0.021296 RAB10 -0.021192 SNRNP25 0.021172 S100A10 0.021146 ARHGAP30 -0.021122 NME1 -0.021112 IFIH1 -0.021089 NSMCE1 0.021053 UTP3 0.021049 DOCK2 -0.021033 KRTCAP2 0.020984 TES -0.020984 EIF5 -0.020915 RPA1 0.020883 WDR26 -0.020878 GSTP1 -0.020852 SOD1 0.020827 MELK 0.020806 STAT3 -0.020742 HSPA8 -0.020742 CTSW -0.020730 ZC3H11A -0.020696 RAP1B -0.020628 RNF123 -0.020565 MIS18A 0.020527 DDX3X -0.020480 LIG1 0.020433 THRAP3 -0.020416 CBLB -0.020353 NSUN2 -0.020348 DGKA -0.020309 SMC2 0.020287 HAUS4 0.020283 RNASEH2B 0.020245 TMC6 -0.020243 GBP7 -0.020192 RPL37A -0.020174 KMT2C -0.020168 REEP4 0.020118 MAN1A1 -0.020097 GPBP1 -0.020083 CHD3 -0.020078 ITM2C -0.020054 MAX -0.020007 RNF44 -0.020000 MGST2 0.019977 AKAP8 -0.019976 GRAMD4 -0.019969 ACTR3 -0.019968 RPS9 -0.019940 SEPP1 -0.019940 CSF2RB -0.019905 HAUS1 0.019842 DNAJC7 -0.019837 GNB2 0.019829 TRIM21 -0.019801 RAB5A -0.019785 KIF2C 0.019734 PDLIM4 0.019731 DAD1 -0.019677 PTPN1 -0.019667 RPL24 -0.019655 MXD3 0.019638 VBP1 0.019625 SF3B1 -0.019486 GIMAP8 -0.019470 TECPR1 -0.019410 DNMT1 0.019355 TMEM64 -0.019355 OGFR -0.019328 PARP14 -0.019281 TCF19 0.019281 UHRF1 0.019267 KIF22 0.019260 RABAC1 -0.019225 NFKB1 -0.019221 SNRPD1 0.019182 ELOF1 0.019179 ALOX5AP -0.019169 EIF4G2 -0.019151 TMPO 0.019115 RSAD2 -0.019111 NCAPH2 0.019091 RPS6KA1 -0.019085 BACH2 -0.019078 CNPPD1 -0.019074 SLC39A7 -0.019037 CAB39 -0.018991 MAN2B1 -0.018980 SOCS3 -0.018973 RACGAP1 0.018972 OAT 0.018884 GRINA -0.018856 KMT2B -0.018846 EIF2S3 -0.018840 RAD51AP1 0.018731 EP300 -0.018728 ERO1L -0.018702 CLIC1 0.018680 MYC -0.018673 EIF3K 0.018663 NFATC3 -0.018636 OGT -0.018628 CMIP -0.018452 OAS1 -0.018382