!direction	0
!num_genes	500
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Homo sapiens
!organism	Homo sapiens
!cell	MCF10A
!perturbation 1	X-ray irradiation 
!perturbation 2	TGFbeta treatment
!concentration 1	2 Gy
!concentration 2	0.4 ng/ml
!disease	Breast cancer
!end_metadata
KRT15	-0.138235
POSTN	0.121773
FN1	0.101180
IGFBP3	0.099981
PTX3	0.099977
CA2	-0.097874
CXCL1	0.096114
SAMSN1	0.094238
FXYD3	-0.090614
FAP	0.086888
PLAT	-0.082012
HSD17B2	0.076996
WNT5A	0.071759
MTMR11	0.068999
SERPINE2	0.068977
EPCAM	-0.066449
MME	0.065515
DKK1	0.064971
ST6GALNAC2	-0.063865
CXCL2	0.061995
BAMBI	0.060407
VAV3	-0.060289
SULT1E1	-0.058997
BBOX1	-0.056892
VCAN	0.056816
SRPX	0.056173
COL4A2	0.054458
ITGA10	0.054154
IRF9	0.053230
SULF1	0.053025
AGR2	-0.051975
PRR16	0.051553
PCSK1	-0.051419
FPR1	0.051146
FSTL1	0.051061
FGFBP1	-0.050138
FGFR3	-0.050010
CXCL3	0.048317
TNFAIP6	0.047907
CXADR	-0.047278
ALDH3A1	-0.047190
DCN	0.047149
IL6	0.045594
IRX5	-0.045347
SEPP1	-0.045330
MAOA	-0.045204
MMP28	-0.044704
NCF2	0.044141
CAMP	-0.044070
EPHX1	-0.043950
SPRR1B	-0.043841
CDH1	-0.042890
ALDH3A2	-0.042843
FAT2	-0.042767
ZNF652	-0.041668
GLS2	-0.041519
INHBE	0.041247
GNG11	0.041190
IGFBP7	0.040603
GOLGA8A	0.040412
F3	0.040406
ZBED8	0.040404
AMIGO2	0.040079
IMPA2	-0.039888
PALMD	-0.039539
CRIP2	-0.039256
PPL	-0.039180
GSR	-0.039007
LEPREL1	-0.038974
SLC27A3	-0.038693
PERP	-0.038521
IL1B	0.038409
PPID	-0.038204
IL32	0.038130
NT5E	0.037968
KDELR3	0.037853
FZD2	0.037663
FAM129A	0.037273
IRS1	-0.037197
MCC	-0.036935
EMP3	0.036562
CDH4	0.036469
PIR	-0.036421
NUPL1	0.036353
EIF2S3	-0.036134
GSTA4	-0.036106
PTGS2	0.036053
CD9	-0.035948
SPRR2B	0.035651
VNN1	0.035631
STEAP1	0.035546
PAK6	-0.035463
IGFBP2	-0.035235
GINS2	0.035056
GM2A	-0.034996
CELSR2	-0.034794
C1S	0.034789
UGCG	0.034723
S100A14	-0.034673
TRIM29	-0.034593
PLEK2	0.034513
MCTP1	0.034477
GADD45B	0.034410
TNFRSF21	-0.034345
CLK1	0.034008
GLUL	-0.033883
PMAIP1	0.033754
BLNK	-0.033666
CADM3	0.033528
FGF2	0.033467
MLLT11	0.033255
POLG2	0.033117
GLDC	-0.033076
DTX4	-0.033068
CAPRIN2	0.032948
COL4A1	0.032933
RRM2	0.032734
SLC22A4	0.032623
IRF6	-0.032521
ATP6V1A	-0.032508
TSPAN5	0.032483
KRT5	-0.031976
SDPR	-0.031909
AKR1C1	-0.031846
DSC2	-0.031781
GMPPB	0.031594
CCND2	0.031477
SCNN1B	-0.031422
ASL	0.031151
CYR61	0.030926
NET1	-0.030879
DDR1	-0.030876
ACKR1	0.030833
OLAH	0.030765
ABLIM1	-0.030748
PLS1	-0.030712
HJURP	0.030696
ARHGAP29	0.030639
G6PD	-0.030620
IER3	0.030570
FBN1	0.030517
AOX1	0.030484
PC	-0.030450
TSTA3	0.030437
CDH3	-0.030374
GPRC5A	-0.029942
ID3	-0.029894
FYN	0.029885
IFNGR1	-0.029871
COBL	-0.029729
DSG3	-0.029618
HOXA1	0.029605
DSP	-0.029586
METTL3	0.029513
JUP	-0.029439
ETS2	-0.029347
ZMIZ1	-0.029284
METTL7A	-0.029214
FBLN5	0.029170
EXO1	0.029156
SPDL1	0.029025
MOCS3	-0.028898
CCNA2	0.028897
PLAC8	0.028887
CHGB	0.028794
SLC46A3	0.028695
SELENBP1	-0.028694
KLF10	-0.028637
CBS	0.028626
TAF1A	0.028446
HILPDA	0.028385
BIRC3	0.028329
FAIM3	0.028265
RPGR	0.028261
MGLL	0.028116
DLC1	0.028082
CENPU	0.027856
TRIP13	0.027854
PLAU	0.027841
TSPAN31	-0.027789
ZNF264	-0.027782
RSRP1	0.027716
TLR3	-0.027686
THBS1	0.027578
SLC39A8	0.027440
BTN2A1	0.027416
RAPGEFL1	-0.027302
CLIC2	0.027292
ORC6	0.027288
LCN2	0.027278
FTL	0.027242
EVI2B	0.027076
SLC26A2	0.027048
CAT	-0.026957
RWDD2A	0.026848
PRIM1	0.026754
RAB20	-0.026665
JAG2	-0.026498
PSMB10	0.026477
TFCP2L1	-0.026374
STK38L	0.026345
NDRG3	-0.026322
SERPINA1	0.026269
FHL2	-0.026211
DYRK4	0.026156
TMEM126B	0.026154
AKR1C2	-0.026145
PIK3C2B	-0.026075
ANPEP	0.026038
OSGEP	0.026022
MAPK12	0.026018
KCTD7	0.025961
PDGFRL	0.025915
TUBB2A	-0.025906
CSF3	0.025898
DDX10	0.025880
SFRP1	-0.025875
TROAP	0.025848
TGFBI	0.025836
QSOX1	0.025782
ITGB2	0.025760
PITPNC1	0.025674
HIST1H4C	0.025662
TMEM132A	0.025633
DNASE1L1	0.025517
RIT1	0.025487
CCNG2	0.025388
PID1	0.025348
PDCD4	-0.025337
ADORA2B	-0.025183
ZEB1	0.025139
LRP8	0.025134
S100PBP	0.025107
IL1A	0.025105
TGFBR3	-0.025101
ZNF204P	-0.025100
GLRX	0.025081
LUC7L	0.025059
C9orf3	-0.025051
ISG15	0.025048
NXN	-0.025011
LOX	0.024963
ALAS1	0.024882
MAP7	-0.024879
NRP1	0.024801
ACD	0.024770
SLC1A3	-0.024751
KCNN4	-0.024674
KLF11	-0.024655
MLPH	0.024574
OAS1	-0.024569
SRD5A1	-0.024459
S100A4	0.024336
SH2D2A	0.024267
ABCA12	-0.024262
GOSR2	0.024248
CAMK2N1	0.024182
STC2	0.024180
ERCC4	-0.024119
IFI35	0.024098
ZC3H12A	0.024093
CRYAB	-0.024081
PKP2	-0.024079
DTL	0.024078
TINAGL1	-0.024064
TPST1	0.024021
CYB561D2	0.024019
BORA	0.024012
CLCA2	-0.023963
ZNF184	0.023941
TJP2	-0.023869
ADH1B	0.023836
HIST1H2BK	-0.023793
SKA1	0.023787
MAP1B	0.023762
HADHB	-0.023761
LRP5	-0.023741
LIMCH1	0.023740
SNAPC1	0.023650
PER2	-0.023621
MEAF6	-0.023617
BACE2	0.023520
SMAD7	0.023517
F11R	-0.023428
LAMC2	0.023398
ATP2B4	-0.023331
TSPAN1	-0.023251
KBTBD2	0.023233
C16orf45	0.023202
C1orf106	-0.023146
CLK4	0.023134
GPR87	-0.023075
GHR	-0.023072
MEGF9	-0.023062
COL4A5	-0.023050
KIAA0907	0.023024
PTGFR	0.022928
MARCKSL1	0.022883
SNHG3	0.022831
FTSJ1	0.022795
TP53I3	0.022790
FEN1	0.022710
MNT	-0.022677
LAMB1	0.022667
PLSCR1	0.022662
TREM1	0.022625
GCAT	0.022623
DXO	0.022602
TGM1	-0.022599
NMU	-0.022571
FKBP10	0.022563
CENPA	0.022556
ESRP1	-0.022547
NOTCH2NL	0.022508
EEF1A2	0.022484
CLU	-0.022446
SPINT1	-0.022417
CEP83	0.022380
SPARC	0.022369
ERCC8	0.022366
DOCK4	0.022358
CDH2	0.022335
TEX30	0.022295
ST14	-0.022280
RAB38	-0.022270
IL1RL1	0.022255
FAM134B	-0.022226
P4HA2	-0.022187
RIN1	-0.022153
PHLDA1	0.022123
ACSF2	-0.022097
STARD13	0.022093
CPT2	-0.022077
MAD2L1	0.021867
GOLGA8B	0.021867
SEL1L3	-0.021854
CHAC1	0.021831
RNF125	-0.021809
ANK3	-0.021747
SRGN	0.021735
LZTFL1	0.021702
PARP2	0.021644
EPB41L4A	-0.021632
SMPDL3A	-0.021618
PNKP	0.021602
NEDD4	0.021513
CRKL	-0.021501
ZFP36	0.021445
GRAMD3	0.021415
EPPK1	-0.021411
CEP70	0.021372
PDLIM2	0.021368
ANKRD28	0.021358
ZFC3H1	0.021348
ZCCHC2	-0.021343
SCARB2	-0.021302
ECH1	-0.021292
FASTKD3	0.021266
LGALS7	-0.021258
CORO2A	-0.021243
EXTL2	0.021157
LRRC49	0.021157
LOC647859	-0.021071
RNASEH2A	0.021039
FLRT2	0.021038
KLRC3	-0.021014
SERINC5	-0.021010
GEMIN2	0.020990
MED22	0.020983
NCAPG2	0.020869
CHCHD7	0.020832
SSBP2	-0.020829
TP63	-0.020810
ORC3	0.020761
DNAJB9	0.020725
CIDEB	-0.020662
CHEK2	0.020656
PILRB	0.020637
UNC5B	-0.020632
HOXC13	0.020630
MTF2	0.020622
RTN1	0.020617
THBD	-0.020604
FKBP14	0.020600
TMEM39A	0.020594
BICC1	0.020585
SGK1	-0.020540
CD82	-0.020531
ZNF322P1	0.020492
PRSS23	0.020478
SHCBP1	0.020474
MGST2	-0.020448
RSRC2	0.020423
AP1M2	-0.020416
TAGLN	0.020410
MLH3	0.020402
P4HTM	-0.020385
MCM7	0.020361
PRKRIP1	0.020359
SLC7A5	-0.020330
BCL10	-0.020326
CALU	0.020299
RNASEH1	0.020276
ETNK2	-0.020273
UGGT2	0.020258
DYRK3	0.020237
BHLHE40	-0.020236
OTUD3	0.020218
SLC25A36	0.020201
CACNA2D3	0.020180
RAB31	0.020173
SCG5	0.020161
PAM16	0.020158
METTL22	0.020148
IL6R	-0.020132
TMEM159	-0.020067
CD320	0.020055
QTRT1	0.020039
GGH	0.020038
AIM1	-0.020027
CAV1	-0.019995
ICAM3	0.019972
S100P	0.019970
ANKFY1	-0.019965
GPRC5C	-0.019945
CDCA3	0.019942
DST	-0.019940
AKR1C3	-0.019925
ZC3H4	-0.019858
DMTF1	0.019791
IFITM1	0.019788
LAMA3	0.019786
MCM2	0.019744
PPFIBP1	-0.019728
AKAP17A	0.019693
KIAA0922	-0.019691
CCDC88C	-0.019682
USPL1	0.019648
MYH9	-0.019628
SLC7A2	0.019610
HIST1H2BE	-0.019608
DNAJB14	0.019603
SNX16	0.019562
ATP1A1	-0.019541
PSPH	-0.019530
EMR2	0.019468
CDC45	0.019458
OGT	0.019422
KRT16	-0.019415
KIAA0020	0.019402
AP5M1	-0.019386
MPC1	0.019345
TRMT11	0.019324
KLHL21	-0.019310
TSKU	-0.019244
ZSCAN9	0.019210
RPS6KA2	0.019178
NME4	0.019174
P2RX4	0.019167
PDZK1IP1	0.019141
PEA15	0.019136
DHRS3	-0.019129
NAT9	0.019126
TOM1	0.019126
CORO1C	-0.019114
SNCA	-0.019060
SMAGP	0.019056
HSPA4L	-0.019026
CTGF	0.019017
DSN1	0.018996
RFC3	0.018987
BARD1	0.018978
CLK2	0.018970
TRIM23	0.018963
SOX15	-0.018935
SLCO4A1	-0.018922
RGL1	0.018919
THOC6	0.018919
LOC654342	0.018910
NOTCH1	-0.018904
TGDS	0.018898
SLITRK5	-0.018882
DCP2	0.018878
NFIC	-0.018868
FHL1	0.018865
CLDN1	-0.018843
TNFAIP8	-0.018813
ALG6	-0.018755
MSH5	0.018754
AKIP1	-0.018725
FLRT1	-0.018717
MAP3K7CL	-0.018710
RASSF1	0.018704
RHOQ	0.018620
IFITM3	0.018612
ZDHHC3	-0.018604
LAD1	-0.018589
SETD5	0.018576
FICD	0.018563
CDC7	0.018562