!direction 1 !num_genes 385 !diffexp_method chdir !cutoff 500 !correction_method None !threshold None !organism Mus musculus !gene HDAC1 !cell Mouse Embryonic Fibroblasts !perturbation Tamoxifen (nonscrambled micro-RNA) !disease MEF transcription levels lacking HDAC1 !end_metadata IGFBP2 0.209604 GREM1 0.150904 CTHRC1 0.143385 SERPINE2 0.140601 VIP 0.126712 NOV 0.116060 POSTN 0.105835 CCNG1 0.102388 WBP5 0.101064 SAT1 0.098039 B2M 0.094176 THBS1 0.089074 MMP2 0.086029 MOXD1 0.083555 MAN2A1 0.083055 H19 0.081377 MAP1LC3B 0.079458 LAMP1 0.077811 ATP6AP2 0.077700 IGF2 0.076257 ATP6V1F 0.073774 FSTL1 0.073358 TAGLN 0.069464 UQCRHL 0.068744 EPHX1 0.068605 RNASE4 0.068109 BASP1 0.066261 IFITM3 0.066038 CST3 0.065431 RPS12 0.064644 NREP 0.064557 SCPEP1 0.064418 COX4I1 0.064341 CTSD 0.064249 RPL26 0.064122 TSC22D1 0.064101 COX6B2 0.063628 ACKR3 0.063324 CPE 0.062477 SARAF 0.061728 RPS28 0.060201 ASAH1 0.059114 CDKN1A 0.058117 HSBP1 0.058068 CD81 0.057089 ATP6V0C 0.056974 ITM2A 0.056283 RPS29 0.055238 EIF4A2 0.055132 FKBP9 0.055046 LOX 0.054469 GSTO1 0.054289 ITM2B 0.054194 PFN2 0.054160 RPLP2 0.053740 RPL4 0.052959 NDUFA1 0.052718 NME2 0.052502 NDRG4 0.051466 FTL 0.051030 RHOQ 0.050858 GRN 0.050667 ITM2C 0.050132 MYL9 0.049874 ACTG1 0.049678 RPS27L 0.049523 LAMP2 0.048878 RPS27A 0.048649 EEF1A1 0.048308 CDH11 0.048292 NUAK1 0.048266 WDR6 0.048207 DSTN 0.047711 NGFRAP1 0.047657 GABARAP 0.047382 SLC25A4 0.047242 RPL38 0.047157 CTSV 0.046664 TP53INP1 0.046251 RPL35 0.046153 CEMIP 0.046020 ABHD4 0.045923 CCND2 0.045870 MFGE8 0.045855 OGN 0.045691 LY6E 0.045643 C1QTNF3 0.045637 RPS7 0.045592 EFEMP1 0.045537 GNS 0.045300 ZMAT3 0.045048 PTGR1 0.044838 LRRC17 0.044151 MANF 0.044019 IFI30 0.043975 FST 0.043566 LAPTM4A 0.043507 GNG10 0.043426 SQSTM1 0.043404 RPLP0 0.043171 CXCL12 0.043082 BSG 0.042763 TPT1 0.042651 RPL28 0.042173 PEBP1 0.041980 RPS11 0.041974 RPL19 0.041962 RPS10 0.041151 TIMP2 0.040974 ASS1 0.040970 HEXB 0.040948 COX6B1 0.040906 RPL23 0.040863 PEG3 0.040786 PRNP 0.040755 SDPR 0.040731 RPS24 0.040665 ITGB5 0.040529 UBC 0.040448 COL3A1 0.040013 HSPB1 0.039843 CSTB 0.039827 PSMB4 0.039762 AGA 0.039694 TUBB2B 0.039687 CYBA 0.039665 PERP 0.039490 CNN3 0.039478 GSTM3 0.039246 ATP6V0D1 0.038863 COX6A1 0.038801 RBP1 0.038792 COL5A2 0.038749 LTBP2 0.038672 F2R 0.038612 SERPINF1 0.038146 GRINA 0.037881 RPS23 0.037822 PGRMC1 0.037581 ATP6V0E1 0.037554 HMGN1 0.037455 RPL27A 0.037201 CNN1 0.037026 EEF1B2 0.036730 RPS21 0.036726 IL1RL1 0.036632 FBN1 0.036629 RPL37A 0.036206 DKK3 0.036181 CRYAB 0.036098 COL11A1 0.035893 LDHB 0.035882 RPS19 0.035875 RPL15 0.035779 NID1 0.035633 HEXA 0.035592 TPP1 0.035478 FAM8A1 0.035160 RPS5 0.035159 AEBP1 0.034937 ANXA5 0.034522 FAM198B 0.034238 FAT1 0.034155 ROMO1 0.034047 HSP90B1 0.033573 TSPAN3 0.033482 GADD45G 0.033133 FBLN5 0.032878 NDUFV3 0.032762 NPC2 0.032759 COL2A1 0.032705 FAM3C 0.032703 CTSZ 0.032641 RPL18A 0.032466 HADH 0.032395 TRAPPC2L 0.032370 SERPINB9 0.032037 NPR3 0.031773 TMEM50A 0.031746 MDH2 0.031370 DLK1 0.031257 TPRG1L 0.031115 RPL7A 0.030677 APP 0.030539 SNX2 0.030050 SEPW1 0.030031 GXYLT2 0.029936 ITPRIPL2 0.029795 GABARAPL2 0.029709 KIAA0196 0.029707 SDC2 0.029505 UGP2 0.029459 HPCAL1 0.029129 IDH1 0.029101 RPS15A 0.029074 AKAP2 0.029051 IGDCC4 0.028990 ATP5H 0.028638 CCDC80 0.028626 ACADM 0.028565 GAS6 0.028489 GAA 0.028342 RECK 0.028330 RPS20 0.028257 CALR 0.028056 C18orf32 0.028014 COX7A2 0.027988 HSPA8 0.027967 CADM4 0.027910 BMP4 0.027907 ATP5G3 0.027901 AAMDC 0.027813 CTNNB1 0.027784 AP3S1 0.027603 RPL13 0.027600 SRP14 0.027592 MYCN 0.027335 PSMD8 0.027305 PDIA3 0.027110 FUCA1 0.027102 BGN 0.027035 LAMTOR5 0.026758 PLA2G4A 0.026752 CSRP2 0.026637 TGFB3 0.026567 FBLN2 0.026458 COL8A1 0.026376 ATP6V0B 0.026302 NDUFB6 0.026169 ATP6V1D 0.025992 THBD 0.025775 LRP11 0.025768 PSME1 0.025741 WLS 0.025737 AKR1B1 0.025683 PRSS23 0.025582 GSN 0.025559 CCND1 0.025526 GCSH 0.025520 NDFIP1 0.025508 CMTM3 0.025439 C14orf2 0.025414 NDUFA3 0.025351 FN1 0.025328 ATP6AP1 0.025166 RPL10A 0.025112 SCP2 0.025042 PLAT 0.024846 CAT 0.024746 PMP22 0.024719 EIF3F 0.024638 ITGB1 0.024603 RND3 0.024404 RPS14 0.024378 CTSB 0.024365 TSPAN6 0.024308 NUCB1 0.024293 GABARAPL1 0.024038 COX7A2L 0.024032 SULF2 0.024022 GINM1 0.023795 PHLDA3 0.023722 QDPR 0.023640 COL4A1 0.023611 FBXO25 0.023462 DCTN3 0.023445 GOLGA7 0.023400 CNN2 0.023339 SERPINB1 0.023255 RPL24 0.023184 SCARB2 0.023172 RPS26 0.023100 NACA 0.022951 FNDC3B 0.022949 GPX3 0.022882 GPX4 0.022772 RPL3 0.022660 PSAP 0.022607 SPARC 0.022488 SH3BGRL 0.022473 HTRA1 0.022461 SDC1 0.022460 TAPBP 0.022445 MSRB1 0.022408 RPL11 0.022355 DCXR 0.022260 TMEM98 0.022249 EXOC4 0.022081 CCDC23 0.021996 PTPLAD1 0.021948 CHCHD2 0.021780 RPL5 0.021685 GLIPR1 0.021661 IGFBP4 0.021639 IFITM2 0.021618 CETN2 0.021552 TCN2 0.021536 COL5A1 0.021446 ACOT7 0.021290 MAOA 0.021285 RPL27 0.021280 ATP6V1C1 0.021191 VIM 0.021104 RPS17 0.021056 CCT2 0.021004 RPS15 0.021001 COL1A2 0.020876 LAPTM4B 0.020866 SH3BGRL3 0.020796 C14orf166 0.020763 HSPH1 0.020636 RCN2 0.020600 PGPEP1 0.020595 CYR61 0.020553 PDPN 0.020543 COL18A1 0.020511 UQCRB 0.020393 SCOC 0.020358 EI24 0.020346 RPL6 0.020325 COL7A1 0.020318 DYNLRB1 0.020261 PAIP2 0.020253 MYEOV2 0.020192 GBA 0.020140 MFSD1 0.020135 ATP6V1A 0.020123 MCAM 0.020078 STT3B 0.020057 RCN1 0.020053 IFI35 0.020048 ATP6V1G1 0.019905 CTSA 0.019877 RPL21 0.019826 CPXM1 0.019823 GGA2 0.019806 HIST1H2BI 0.019759 APOA1BP 0.019723 RPL22 0.019714 CHMP4B 0.019711 SERF2 0.019695 RPL13A 0.019562 POLR2G 0.019559 INHBB 0.019555 C14orf79 0.019525 LOXL1 0.019497 ATRAID 0.019492 RNF145 0.019440 FNTA 0.019437 RHOB 0.019391 ABCG2 0.019385 SELK 0.019352 SMIM14 0.019276 RPL10 0.019229 FAM101B 0.019189 NDUFA13 0.019120 PLIN2 0.019030 CLPTM1L 0.018994 C5orf51 0.018992 KLHL7 0.018991 OXCT1 0.018970 COMMD10 0.018966 F3 0.018911 FKBP3 0.018863 FKBP7 0.018828 LPP 0.018793 RASA3 0.018793 MYL12A 0.018793 GPC4 0.018706 TNC 0.018687 RRAGC 0.018681 OSMR 0.018674 TCEAL8 0.018631 CANX 0.018539 VTI1B 0.018360 ARL4C 0.018335 IVNS1ABP 0.018326 PLA2G16 0.018306 ACTG2 0.018285 MRPL24 0.018279 PCYOX1 0.018251 PDGFRB 0.018128 CTSH 0.018127 HSPA5 0.017972 COX5A 0.017941