!direction	1
!num_genes	203
!diffexp_method	chdir
!cutoff	500
!correction_method	None
!threshold	None
!organism	Mus musculus
!microbe_id	Taxonomy ID: 623
!microbe_name	Shigella flexneri
!cell_type	intestinal tissues
!organism	mouse
!end_metadata
REG3A	0.319787
REG3G	0.257197
TM4SF20	0.225690
CCL20	0.206214
KRT18	0.148540
CLDN4	0.127586
KRT20	0.117265
S100A10	0.116178
FOS	0.115574
NFKBIA	0.113568
SOCS3	0.109892
RAB30	0.109444
LDHA	0.091588
SPINK1	0.090916
PLSCR1	0.081406
SQSTM1	0.077232
APOA2	0.075380
IFRD1	0.064116
CTSV	0.061848
RASD1	0.061594
ZFP36	0.061335
TIFA	0.061026
KRT8	0.059706
LGMN	0.058936
CREB3L3	0.058803
AREG	0.058598
APOA1	0.056241
DUSP6	0.054557
LGALS3	0.053571
CASP4	0.053247
RSAD2	0.052610
IFIT1B	0.051752
ID1	0.051464
RNF186	0.050235
SERPINB1	0.049731
EFHD2	0.049537
CLDN7	0.049399
BTG1	0.048927
MORF4L2	0.048839
CDH1	0.048731
TRIM15	0.048373
XBP1	0.047253
LCN2	0.046734
PLIN2	0.046719
ANXA2	0.046104
CLIC1	0.045808
IFIT2	0.045215
CASP8	0.044838
CSTB	0.044563
EMP1	0.043008
IFITM3	0.040958
NTS	0.040930
PGK1	0.040379
PHLDA1	0.040353
ACTG1	0.039926
ELF3	0.039824
GPX2	0.039783
CTSH	0.039214
DMBT1	0.038976
USP18	0.038618
CDH17	0.038286
KLF6	0.037426
UBALD2	0.037160
LITAF	0.035786
CCNL1	0.034124
RHOB	0.033659
SAT1	0.033626
GADD45G	0.033509
NDRG1	0.032559
BCAR3	0.032109
HK2	0.031909
BCL3	0.031466
CLIC4	0.031453
LMO7	0.030698
MMP13	0.030648
CXCL2	0.030321
PTP4A1	0.030205
CTSZ	0.030126
DUSP14	0.028877
SLC25A25	0.028308
STK17B	0.028192
CEACAM1	0.028086
PFKFB3	0.028080
AZIN1	0.027670
RPL28	0.027599
PARP14	0.027539
PLEC	0.027525
S100A1	0.026713
LYPD8	0.026335
ERRFI1	0.026240
ACE2	0.026197
CYCS	0.025885
FAM84A	0.025412
SSFA2	0.025337
RNASE4	0.025158
C11orf86	0.024441
OAS1	0.024433
EGR1	0.024174
EPS8L3	0.024070
FOLR1	0.024056
GLB1	0.024033
STOM	0.024021
CARD14	0.023978
SPTLC2	0.023978
KRT19	0.023882
SPATS2L	0.023851
EPCAM	0.023245
CEBPB	0.023153
CCL13	0.023077
IER3	0.023010
IFIH1	0.022849
RCAN1	0.022698
TNFRSF12A	0.022588
GBP3	0.022503
SLC35B3	0.022285
RPL7	0.022073
PNRC1	0.021789
RELA	0.021608
TMBIM1	0.021531
PARP9	0.021371
WBP5	0.021370
PNP	0.021366
SLPI	0.021318
RAP1B	0.021193
TNFRSF1A	0.020668
C3	0.020238
NFKBIZ	0.020181
EIF5A	0.019907
RIPK3	0.019884
CCRN4L	0.019876
CISH	0.019622
ATF3	0.019449
SGPP1	0.019396
OASL	0.019346
SERPINB6	0.019273
CXCL16	0.019120
PPP1R15A	0.019065
ICAM1	0.019044
EIF6	0.019041
TES	0.018975
RNF128	0.018958
AMN	0.018700
SMAGP	0.018603
GOLM1	0.017718
SLC25A28	0.017510
KLF5	0.017089
RBP2	0.017034
EIF4G2	0.016967
SPRR1A	0.016889
ST3GAL1	0.016722
HIF1A	0.016719
TINAGL1	0.016717
IFITM2	0.016696
LAMTOR3	0.016674
SLC7A9	0.016644
TFF1	0.016462
CALR	0.016307
IL1B	0.016258
TMEM140	0.016213
C18orf32	0.016171
SOWAHC	0.016095
IER2	0.016078
BIRC3	0.015880
CXCL10	0.015517
SOCS2	0.015404
CDKN1A	0.015373
DDX3X	0.015278
RCHY1	0.015276
CCL11	0.015249
PIK3C2A	0.015213
PTPN12	0.015176
PDLIM2	0.015152
UBC	0.015115
LRP10	0.014954
CHCHD2	0.014764
YWHAH	0.014724
TF	0.014708
PTP4A2	0.014593
PIM3	0.014589
RPL10	0.014555
SLFN12L	0.014524
EREG	0.014485
SLC38A2	0.014476
RPS27L	0.014430
WSB1	0.014321
DUSP1	0.014177
GOLGA7	0.014114
HS3ST1	0.014077
TSPAN8	0.013822
CD14	0.013699
RPL26	0.013624
NT5C3A	0.013607
B4GALT6	0.013515
CD55	0.013462
PICALM	0.013378
GCH1	0.013328
CD47	0.013290
LGALS9B	0.013234
DUSP16	0.013202
IRF1	0.013201
HEPH	0.013190
FAM162A	0.013164
ACSL5	0.013155