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GEN3VA Reports for these tags

PATHOGENS_BD2K_LINCS_DCIC_COURSERA

SOFT file
Title / Description Microarray studies on effect of Pneumocystis carinii infection on global gene expression in alveolar macrophages
Accession GSE20149
Summary With a filter of false-discovery rate less than 0.1 and fold change greater than 1.5, 115 genes were found to be up- and 137 were down-regulated in alveolar macrophages during Pneumocystis carinii infection.
Organism Rattus norvegicus
Platform GPL85
Normalized False
Parsed SOFT file
Metadata
Differential expression method Characteristic Direction
Cutoff 500
Microbe_id Taxonomy ID: 4754
Microbe_name Pneumocystis carinii
Cell_type alveolar macrophages
Organism other
Visualizations
Principal Component Analysis
Hierarchical clustering
External Links and Downloads
Gene lists Enrichr L1000CDS2 PAEA Crowdsourcing
Up
Down
Combined