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GEN3VA Reports for these tags

PATHOGENS_BD2K_LINCS_DCIC_COURSERA

SOFT file
Title / Description Clock mutant cecum response to Salmonella enterica serovar Typhimurium infection at different circadian times
Accession GDS4622
Summary Analysis of cecum from master circadian regulator Clock mutants infected with S. Typhimurium at two circadian times (10am and 10pm). Clock mutants infected at night exhibited higher inflammation. Results provide insight into the role of the circadian clock in the host immune response to infection.
Organism Mus musculus
Platform GPL6246
Normalized False
Parsed SOFT file
Metadata
Differential expression method Characteristic Direction
Cutoff 500
Microbe_id Taxonomy ID: 90371
Microbe_name Salmonella enterica serovar Typhimurium
Cell_type cecum
Organism mouse
Visualizations
Principal Component Analysis
Hierarchical clustering
External Links and Downloads
Gene lists Enrichr L1000CDS2 PAEA Crowdsourcing
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