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GEN3VA Reports for these tags

GEO_Monthly_Analysis Sclerosis

SOFT file
Title / Description Limited systemic sclerosis patients with PAH show biomarkers of inflammation and vascular injury
Accession GSE19617
Summary Limited systemic sclerosis patients with pulmonary arterial hypertension show biomarkers of inflammation and vascular injury Forty-nine PBMC samples were obtained from 21 lSSc subjects without PAH (lSSc-noPAH), 15 lSSc subjects with PAH (lSSc-PAH), and 10 healthy controls; three subjects provided PBMCs one year later. Genome-wide gene expression was measured for each sample. Gene expression clearly distinguished lSSc samples from healthy controls, and separated lSSc-PAH from lSSc-NoPAH patients. The gene expression and cytokine profiles of lSSc-PAH patients suggest the presence of activated monocytes, and show markers of vascular injury and inflammation.
Organism Homo sapiens
Platform GPL6480
Normalized False
Parsed SOFT file
Metadata
Differential expression method Characteristic Direction
Cutoff 500
Cell Peripheral Blood Mononuclear Cells
Disease Relevant info: Gene expression analysis of Control PMBC RNA (no PAH) and that of LSSC RNA (PAH)
Visualizations
Principal Component Analysis
Hierarchical clustering
External Links and Downloads
Gene lists Enrichr L1000CDS2 PAEA
Up
Down
Combined