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GEN3VA Reports for these tags

LIGANDS_BD2K_LINCS_DCIC_COURSERA

SOFT file
Title / Description TLR4 senses oxidative stress mediated by partially oxidized microvesicles.
Accession GSE45234
Summary Oxidative stress is a hallmark of inflammation in infection or sterile tissue injury. We show that partially oxidized phospholipids of microvesicles (MVs) from plasma of patients with rheumatoid arthritis or cells exposed to oxidative stress induce activation of TLR4. MVs from healthy donors or reconstituted synthetic MVs can be converted to TLR4 agonists by limited oxidation, while prolonged oxidation abrogates the activity. Activation by MVs mimics the mechanism of TLR4 activation by LPS. However, LPS and MVs induce significantly different transcriptional response profile in mouse BMDMs with a strong inflammation-resolving component induced by the endogenous signals. MVs thus represent a ubiquitous endogenous danger signal released under the oxidative stress, which underlies the pervasive role of TLR4 signaling in inflammation.
Organism Mus musculus
Platform GPL1261
Normalized False
Parsed SOFT file
Metadata
Differential expression method Characteristic Direction
Cutoff 500
Ligand_name Lipopolysaccharide (LPS) (100ng/mL - 4hr)
Ligand_id LPB (Lipopolysaccharide binding protein)
Cell_type Bone Marrow (Macrophage - C57BL/6J)
Organism Mouse
Visualizations
Principal Component Analysis
Hierarchical clustering
External Links and Downloads
Gene lists Enrichr L1000CDS2 PAEA Crowdsourcing
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