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GEN3VA Reports for these tags

PATHOGENS_BD2K_LINCS_DCIC_COURSERA

SOFT file
Title / Description Host bladder urothelial response to intracellular bacterial communities
Accession GSE6419
Summary Analysis of urothelial cells distal to or proximal to sites of intracellular bacterial communities (IBCs) of uropathogenic Escherichia coli (UPEC) in infected bladders. UPEC is the primary cause of urinary tract infection in women. Results provide insight into localized urothelial responses to IBCs.
Organism Mus musculus
Platform GPL8321
Normalized False
Parsed SOFT file
Metadata
Differential expression method Characteristic Direction
Cutoff 500
Microbe_id 562
Microbe_name Uropathogenic Escherichia coli
Cell_type urothelium, proximal
Organism mouse
Visualizations
Principal Component Analysis
Hierarchical clustering
External Links and Downloads
Gene lists Enrichr L1000CDS2 PAEA Crowdsourcing
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