ANKRD20A5P Gene

Name ankyrin repeat domain 20 family, member A5, pseudogene
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent proteomics analyses of protocadherin‐γ complexes in the vertebrate central nervous system revealed a broad repertoire of associated proteins—over 120 candidates besides the core clustered protocadherins—that are thought to contribute to the integrity and function of the postsynaptic density. Although the specific biological role of ANKRD20A5P is not explicitly defined in these studies, its identification among the non‐redundant proteins associated with protocadherin complexes suggests that it may be involved in maintaining the structural stability or modulating the activity of protein assemblies critical for synaptic development and neuronal survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn a related investigation examining the regulatory mechanisms of CaMKP activity, the processed C-terminal fragment of a protocadherin‑γ member was shown to function as a scaffold to promote dephosphorylation of CaMKI, implicating a role for protocadherin‐dependent modulation of intracellular calcium signaling pathways. By analogy, although direct functional data for ANKRD20A5P are not provided, its presence within these protein complexes raises the possibility that it could participate in, or modulate, such signaling networks—thereby contributing to the fine regulation of kinase/phosphatase activity that is essential for proper neural function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Meng-Hsuan Han, Chengyi Lin, Shuxia Meng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Proteomics analysis reveals overlapping functions of clustered protocadherins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Proteomics (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/mcp.M900343-MCP200"}], "href": "https://doi.org/10.1074/mcp.M900343-MCP200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19843561"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19843561"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Takashi Onouchi, Yoshimi Kishino-Kaneko, Isamu Kameshita, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of Ca(2+)/calmodulin-dependent protein kinase phosphatase (CaMKP/PPM1F) by protocadherin-γC5 (Pcdh-γC5)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arch Biochem Biophys (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.abb.2015.09.014"}], "href": "https://doi.org/10.1016/j.abb.2015.09.014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26386307"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26386307"}]}]}]}
Synonyms ANKRD20A5
Proteins A20A5_HUMAN
NCBI Gene ID 440482
API
Download Associations
Predicted Functions View ANKRD20A5P's ARCHS4 Predicted Functions.
Co-expressed Genes View ANKRD20A5P's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ANKRD20A5P's ARCHS4 Predicted Functions.

Functional Associations

ANKRD20A5P has 1,443 functional associations with biological entities spanning 5 categories (molecular profile, organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.

Click the + buttons to view associations for ANKRD20A5P from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of ANKRD20A5P gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of ANKRD20A5P gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of ANKRD20A5P gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of ANKRD20A5P gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of ANKRD20A5P gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at ANKRD20A5P gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of ANKRD20A5P gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of ANKRD20A5P gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of ANKRD20A5P gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of ANKRD20A5P gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of ANKRD20A5P gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of ANKRD20A5P gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of ANKRD20A5P gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ANKRD20A5P gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of ANKRD20A5P gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of ANKRD20A5P gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of ANKRD20A5P gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at ANKRD20A5P gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.