ARHGAP45 Gene

Name Rho GTPase activating protein 45
Description Predicted to enable GTPase activator activity. Predicted to be involved in negative regulation of small GTPase mediated signal transduction. Located in cytosol and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ARHGAP45, also known as HMHA1, is a multifunctional Rho GTPase–activating protein that plays key roles in cytoskeletal regulation in both vascular and hematopoietic cells. In endothelial cells, ARHGAP45 acts as a Rac‐GAP to negatively regulate barrier function. Its activity limits basal endothelial integrity, as silencing ARHGAP45 enhances cell spreading, increases cellular surface area, promotes sprout formation, and improves migration and adaptation to shear stress—findings that underscore its role in modulating vascular permeability and remodeling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In the hematopoietic compartment, ARHGAP45 is predominantly expressed and is critical for immune cell dynamics. It regulates naïve T‐cell deformability and motility, thereby controlling the entry of naïve T and B cells into lymph nodes, as well as influencing hematopoietic progenitor cell engraftment and thymus seeding. These functions illustrate how ARHGAP45 helps orchestrate lymphocyte trafficking and immune surveillance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Beyond its role in the regulation of actin dynamics, ARHGAP45 is the source of the minor histocompatibility antigen HA‐1. This antigen is recognized by donor T cells after allogeneic stem cell transplantation and is implicated in graft‐versus‐host as well as graft‐versus‐leukemia responses. In addition, aberrant expression of HMHA1/ARHGAP45 has been associated with enhanced proliferation, migration, invasion, and survival in melanoma cells, highlighting its potential contribution to tumor progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, ARHGAP45/HMHA1 emerges as a versatile regulator that, through its Rac-GAP–mediated modulation of the actin cytoskeleton, fine-tunes endothelial barrier properties and immune cell trafficking, while also participating in antigen presentation mechanisms that influence transplant outcomes and potentially tumor behavior.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "J Amado-Azevedo, N R Reinhard, J van Bezu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The minor histocompatibility antigen 1 (HMHA1)/ArhGAP45 is a RacGAP and a novel regulator of endothelial integrity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Vascul Pharmacol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.vph.2017.11.007"}], "href": "https://doi.org/10.1016/j.vph.2017.11.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29174013"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29174013"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Joana Amado-Azevedo, Renee X de Menezes, Geerten P van Nieuw Amerongen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A functional siRNA screen identifies RhoGTPase-associated genes involved in thrombin-induced endothelial permeability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0201231"}], "href": "https://doi.org/10.1371/journal.pone.0201231"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30048510"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30048510"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Le He, Marie-Pierre Valignat, Lichen Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ARHGAP45 controls naïve T- and B-cell entry into lymph nodes and T-cell progenitor thymus seeding."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.202052196"}], "href": "https://doi.org/10.15252/embr.202052196"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33719206"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33719206"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Aitzkoa Lopez de Lapuente Portilla, Ludvig Ekdahl, Caterina Cafaro, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study on 13 167 individuals identifies regulators of blood CD34+cell levels."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood.2021013220"}], "href": "https://doi.org/10.1182/blood.2021013220"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35007327"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35007327"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Bart-Jan de Kreuk, Antje Schaefer, Eloise C Anthony, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The human minor histocompatibility antigen 1 is a RhoGAP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0073962"}], "href": "https://doi.org/10.1371/journal.pone.0073962"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24086303"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24086303"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Hiroki Torikai, Yoshiki Akatsuka, Yasushi Yatabe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Aberrant expression of BCL2A1-restricted minor histocompatibility antigens in melanoma cells: application for allogeneic transplantation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Hematol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12185-008-0076-5"}], "href": "https://doi.org/10.1007/s12185-008-0076-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18414982"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18414982"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Mikinori Miyazaki, Yoshiki Akatsuka, Tetsuya Nishida, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Potential limitations in using minor histocompatibility antigen-specific cytotoxic T cells for targeting solid tumor cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Immunol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1521-6616(03)00065-2"}], "href": "https://doi.org/10.1016/s1521-6616(03"}, {"type": "t", "text": "00065-2) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12804533"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12804533"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Peng Xu, Jinyuan Ma, Jingjing Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Multiple pro-tumorigenic functions of the human minor Histocompatibility Antigen-1 (HA-1) in melanoma progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Dermatol Sci (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jdermsci.2017.07.004"}], "href": "https://doi.org/10.1016/j.jdermsci.2017.07.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28939173"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28939173"}]}]}]}
NCBI Gene ID 23526
API
Download Associations
Predicted Functions View ARHGAP45's ARCHS4 Predicted Functions.
Co-expressed Genes View ARHGAP45's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ARHGAP45's ARCHS4 Predicted Functions.

Functional Associations

ARHGAP45 has 2,147 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 41 datasets.

Click the + buttons to view associations for ARHGAP45 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ARHGAP45 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of ARHGAP45 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Proteomics Cell lines associated with ARHGAP45 protein from the CCLE Cell Line Proteomics dataset.
CellMarker Gene-Cell Type Associations cell types associated with ARHGAP45 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of ARHGAP45 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of ARHGAP45 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing ARHGAP45 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with ARHGAP45 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DeepCoverMOA Drug Mechanisms of Action small molecule perturbations with high or low expression of ARHGAP45 protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by ARHGAP45 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with ARHGAP45 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with ARHGAP45 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with ARHGAP45 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with ARHGAP45 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
GlyGen Glycosylated Proteins ligands (chemical) binding ARHGAP45 protein from the GlyGen Glycosylated Proteins dataset.
GO Biological Process Annotations 2023 biological processes involving ARHGAP45 gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving ARHGAP45 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2023 cellular components containing ARHGAP45 protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing ARHGAP45 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by ARHGAP45 gene from the curated GO Molecular Function Annotations 2023 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by ARHGAP45 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of ARHGAP45 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of ARHGAP45 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of ARHGAP45 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with ARHGAP45 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of ARHGAP45 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of ARHGAP45 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of ARHGAP45 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of ARHGAP45 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by ARHGAP45 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of ARHGAP45 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of ARHGAP45 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Reactome Pathways 2024 pathways involving ARHGAP45 protein from the Reactome Pathways 2024 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of ARHGAP45 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of ARHGAP45 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of ARHGAP45 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of ARHGAP45 gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of ARHGAP45 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ARHGAP45 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ARHGAP45 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with ARHGAP45 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.