| Name | BORCS8-MEF2B readthrough |
| Description | This gene represents numerous read-through transcripts that span GeneID:729991 and 100271849. Many read-through transcripts are predicted to be nonsense-mediated decay (NMD) candidates, and are thought to be non-coding. Some transcripts are predicted to be capable of translation reinitiation at a downstream AUG, resulting in expression of at least one isoform of myocyte enhancer factor 2B (MEF2B) from this read-through locus. At least one additional MEF2B variant and isoform can be expressed from a downstream promoter, and is annotated on GeneID:100271849. [provided by RefSeq, Oct 2010] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n BORCS8‐MEF2B represents an aberrant form of the MEF2B transcription factor that, under normal conditions, helps govern gene expression programs critical for B‐cell function and differentiation. Studies in non‐Hodgkin lymphomas have shown that MEF2B is recurrently mutated in germinal center–derived cancers such as diffuse large B‐cell lymphoma and follicular lymphoma, where it normally functions as a calcium‐regulated activator that, among other roles, directly upregulates the prototypical oncogene BCL6."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " These mutations frequently enhance MEF2B’s transcriptional output by disrupting its interactions with key corepressors, such as CABIN1 and class II histone deacetylases, thereby deregulating chromatin architecture and promoting oncogenic gene expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition, global mapping of the MEF2B regulome in B-cell lymphomas has implicated MEF2B in the control of genes involved in cell migration, epithelial–mesenchymal transition, and other pathways that drive malignant transformation, with specific mutations reducing DNA-binding affinity and altering downstream transcriptional networks."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Although MEF2B belongs to a broader MEF2 family with diverse roles in muscle, cardiac, and neuronal function, evidence in lymphoid contexts indicates that aberrant MEF2B activity—exemplified by fusion with BORCS8—can disrupt the balance normally maintained by corepressors and coactivators. This disruption likely facilitates sustained deregulated expression of targets such as BCL6 and other oncogenic drivers, thereby contributing to lymphomagenesis. Notably, studies in cardiac development also suggest that proper splicing and isoform expression of MEF2B is required for correct chamber specification, underscoring the importance of precise MEF2B regulation in multiple tissues."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Altogether, the BORCS8‐MEF2B fusion (or aberration) is thought to promote malignant transformation through enhanced transcriptional activation and by disrupting normal chromatin modification networks. These findings provide a mechanistic rationale for targeting the deregulated transcriptional and epigenetic programs driven by altered MEF2B function in lymphoid malignancies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ryan D Morin, Maria Mendez-Lago, Andrew J Mungall, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature10351"}], "href": "https://doi.org/10.1038/nature10351"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21796119"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21796119"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Carol Y Ying, David Dominguez-Sola, Melissa Fabi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MEF2B mutations lead to deregulated expression of the oncogene BCL6 in diffuse large B cell lymphoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Immunol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ni.2688"}], "href": "https://doi.org/10.1038/ni.2688"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23974956"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23974956"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Aidong Han, Ju He, Yongqing Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Biol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jmb.2004.10.033"}], "href": "https://doi.org/10.1016/j.jmb.2004.10.033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15567413"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15567413"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Aidong Han, Fan Pan, James C Stroud, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sequence-specific recruitment of transcriptional co-repressor Cabin1 by myocyte enhancer factor-2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature01555"}], "href": "https://doi.org/10.1038/nature01555"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12700764"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12700764"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Julia R Pon, Jackson Wong, Saeed Saberi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MEF2B mutations in non-Hodgkin lymphoma dysregulate cell migration by decreasing MEF2B target gene activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms8953"}], "href": "https://doi.org/10.1038/ncomms8953"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26245647"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26245647"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Linh Vong, Weizhen Bi, Katharine E O'Connor-Halligan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MEF2C is required for the normal allocation of cells between the ventricular and sinoatrial precursors of the primary heart field."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Dyn (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/dvdy.20828"}], "href": "https://doi.org/10.1002/dvdy.20828"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16680724"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16680724"}]}]}]}
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| NCBI Gene ID | 4207 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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BORCS8-MEF2B has 203 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for BORCS8-MEF2B from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of BORCS8-MEF2B gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with BORCS8-MEF2B gene from the CellMarker Gene-Cell Type Associations dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of BORCS8-MEF2B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of BORCS8-MEF2B gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with BORCS8-MEF2B gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| HuBMAP Azimuth Cell Type Annotations | cell types associated with BORCS8-MEF2B gene from the HuBMAP Azimuth Cell Type Annotations dataset. | |
| IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by BORCS8-MEF2B gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of BORCS8-MEF2B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| KEGG Pathways 2026 | pathways involving BORCS8-MEF2B protein from the KEGG Pathways 2026 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of BORCS8-MEF2B gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of BORCS8-MEF2B gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of BORCS8-MEF2B gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| WikiPathways Pathways 2024 | pathways involving BORCS8-MEF2B protein from the WikiPathways Pathways 2024 dataset. | |