C6ORF226 Gene

Name chromosome 6 open reading frame 226
Summary
{"type": "root", "children": [{"type": "t", "text": "<head>\n <meta charset=\"UTF-8\">\n <title>Summary of C6orf226 Function</title>\n </head>\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Although none of the four studies was designed to specifically characterize C6orf226, information gleaned from their large‐scale and diverse datasets provides preliminary insight into its potential relevance in biomedical research. In the extensive extracellular RNA profiling study"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", transcripts corresponding to mRNAs—including those from lesser‐characterized open reading frame genes such as C6orf226—were detected in circulating extracellular vesicles. This finding suggests that C6orf226 expression could contribute to the pool of circulating biomarkers and might be explored in the context of cancer or other systemic diseases. In a separate investigation focused on enhancing CRISPR/Cas9 delivery via integrase‐deficient lentiviral vectors"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", the underlying advances in transient gene editing may facilitate subsequent functional interrogation of genes like C6orf226, especially when assessing off‐target effects or transient transcript dynamics. Meanwhile, a study employing Bayesian variable selection methods"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "highlights the importance of robust statistical modeling when interpreting genetic data; such approaches can be instrumental in distinguishing genuine functional signals for uncharacterized genes amid broad genomic datasets. Finally, genomic screening for rare functional variants in Crohn’s disease patients undergoing anti–TNF therapy"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "underscores the potential clinical significance of identifying loss-of-function mutations in genes that might contribute to immune modulation and therapeutic response. Although the direct role of C6orf226 in these processes remains to be defined, its detection within these varied contexts points to its emerging interest as a candidate for future functional studies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Tiezheng Yuan, Xiaoyi Huang, Mark Woodcock, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Plasma extracellular RNA profiles in healthy and cancer patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep19413"}], "href": "https://doi.org/10.1038/srep19413"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26786760"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26786760"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Pavel I Ortinski, Bernadette O'Donovan, Xiaoyu Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrase-Deficient Lentiviral Vector as an All-in-One Platform for Highly Efficient CRISPR/Cas9-Mediated Gene Editing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Ther Methods Clin Dev (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.omtm.2017.04.002"}], "href": "https://doi.org/10.1016/j.omtm.2017.04.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28497073"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28497073"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "David Rossell, Francisco J Rubio "}, {"type": "b", "children": [{"type": "t", "text": "Tractable Bayesian variable selection: beyond normality."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Am Stat Assoc (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/01621459.2017.1371025"}], "href": "https://doi.org/10.1080/01621459.2017.1371025"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30906086"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30906086"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "María Chaparro, Adrià Aterido, Iván Guerra, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional rare variants influence the clinical response to anti-TNF therapy in Crohn's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Therap Adv Gastroenterol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1756284819867848"}], "href": "https://doi.org/10.1177/1756284819867848"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31598133"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31598133"}]}]}]}
Synonyms C6orf226
Proteins CF226_HUMAN
NCBI Gene ID 441150
API
Download Associations
Predicted Functions View C6ORF226's ARCHS4 Predicted Functions.
Co-expressed Genes View C6ORF226's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View C6ORF226's ARCHS4 Predicted Functions.

Functional Associations

C6ORF226 has 2,448 functional associations with biological entities spanning 6 categories (molecular profile, organism, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 41 datasets.

Click the + buttons to view associations for C6ORF226 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of C6ORF226 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of C6ORF226 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of C6ORF226 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of C6ORF226 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of C6ORF226 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with C6ORF226 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of C6ORF226 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of C6ORF226 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores cellular components containing C6ORF226 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of C6ORF226 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by C6ORF226 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at C6ORF226 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of C6ORF226 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of C6ORF226 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing C6ORF226 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of C6ORF226 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of C6ORF226 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of C6ORF226 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GO Molecular Function Annotations 2015 molecular functions performed by C6ORF226 gene from the curated GO Molecular Function Annotations 2015 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of C6ORF226 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of C6ORF226 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of C6ORF226 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of C6ORF226 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of C6ORF226 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of C6ORF226 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of C6ORF226 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Kinase Library Serine Threonine Kinome Atlas kinases that phosphorylate C6ORF226 protein from the Kinase Library Serine Threonine Atlas dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of C6ORF226 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of C6ORF226 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles cell lines with C6ORF226 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of C6ORF226 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain C6ORF226 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of C6ORF226 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of C6ORF226 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
NURSA Protein Complexes protein complexs containing C6ORF226 protein recovered by IP-MS from the NURSA Protein Complexes dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of C6ORF226 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations gene perturbations changing expression of C6ORF226 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles cell types and tissues with high or low expression of C6ORF226 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at C6ORF226 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of C6ORF226 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of C6ORF226 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.