| Name | capping protein regulator and myosin 1 linker 3 |
| Description | Predicted to be involved in cell migration and regulation of Arp2/3 complex-mediated actin nucleation. Located in cytoplasm and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n CARMIL3 is emerging as a multifunctional regulator of actin dynamics with diverse roles in cell migration, signaling, and development. In tumor cells, elevated expression of CARMIL3 promotes migration, invasion, and metastatic colonization, indicating its importance in driving aggressive cancer behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In macrophages, CARMIL3 plays a crucial cell‐intrinsic role by modulating the transcription of key proinflammatory cytokines; its deficiency leads to diminished expression of cytokines such as IL‑6, TNF‑α, IL‑1β, and IL‑23 while enhancing anti‐inflammatory IL‑10 levels, a process that is associated with impaired NF‑κB signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In the developing brain, CARMIL3 is localized at nascent excitatory synapses, where it interacts with synaptic cytoskeletal regulators including actin capping protein to facilitate spine structural maturation and AMPA receptor recruitment, which are critical for synapse unsilencing."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Moreover, in vivo studies using zebrafish demonstrate that loss of carmil3 impairs endodermal and dorsal forerunner cell migration, disrupts Kupffer’s vesicle formation, and leads to defects in left/right asymmetry, underscoring its essential role in embryonic morphogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Huan Wang, Chao Wang, Guang Peng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Capping Protein Regulator and Myosin 1 Linker 3 Is Required for Tumor Metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1541-7786.MCR-19-0722"}], "href": "https://doi.org/10.1158/1541-7786.MCR-19-0722"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31694931"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31694931"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Na Zhao, Wenjuan Dong, Hajeong Kim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Capping protein regulator and myosin 1 linker 3 regulates transcription of key cytokines in activated phagocytic cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Signal (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cellsig.2020.109848"}], "href": "https://doi.org/10.1016/j.cellsig.2020.109848"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33246003"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33246003"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Erin F Spence, Shataakshi Dube, Akiyoshi Uezu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "In vivo proximity proteomics of nascent synapses reveals a novel regulator of cytoskeleton-mediated synaptic maturation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-019-08288-w"}], "href": "https://doi.org/10.1038/s41467-019-08288-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30674877"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30674877"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Benjamin C Stark, Yuanyuan Gao, Diane S Sepich, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CARMIL3 is important for cell migration and morphogenesis during early development in zebrafish."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2021.09.008"}], "href": "https://doi.org/10.1016/j.ydbio.2021.09.008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34599906"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34599906"}]}]}]}
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| NCBI Gene ID | 90668 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CARMIL3 has 1,092 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.
Click the + buttons to view associations for CARMIL3 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CARMIL3 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of CARMIL3 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing CARMIL3 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with CARMIL3 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with CARMIL3 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving CARMIL3 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of CARMIL3 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of CARMIL3 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by CARMIL3 gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of CARMIL3 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of CARMIL3 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of CARMIL3 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of CARMIL3 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of CARMIL3 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| SynGO Synaptic Gene Annotations | synaptic terms associated with CARMIL3 gene from the SynGO Synaptic Gene Annotations dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of CARMIL3 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with CARMIL3 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |