| HGNC Family | Pseudoautosomal regions |
| Name | CD99 molecule pseudogene 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe provided abstracts offer insights into two distinct biological pathways rather than detailing any role for a gene/protein named CD99P1. In one study, IRF2‐deficient mice treated with poly(I:C) develop acute pancreatitis that is linked to a dramatic, constitutive up‐regulation of trypsinogen5. Although the pancreatic inflammation requires type I interferon signaling and activation of dsRNA-sensing receptors such as MDA5, RIG-I, and TLR3, the sustained high expression of trypsinogen5 is independent of this pathway. This suggests that, once released from dying acinar cells, trypsinogen5 (which is resistant to the endogenous inhibitor Spink3) may trigger a self‐amplifying cascade of pancreatic injury."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the other studies, attention is focused on CDC23 (also known as cell division cycle 23), a core subunit of the anaphase promoting complex or cyclosome (APC/C). CDC23 localizes to the meiotic spindle in oocytes and is crucial for timely metaphase‐to‐anaphase transition. Knockdown or the presence of pathogenic missense variants in CDC23 disrupts spindle assembly checkpoint activity and inhibits the degradation of cyclin B1 and securin. This interference results in spindle abnormalities, misaligned chromosomes, errors in homologous chromosome segregation, and ultimately the production of aneuploid or maturation‐defective oocytes, which are linked to female infertility."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIt is important to note that none of these abstracts provide any insight into the function of CD99P1. Instead, they highlight the roles of trypsinogen5 in inflammatory pancreatic injury and CDC23 in ensuring proper chromosome segregation during oocyte meiosis.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hideki Hayashi, Tomoko Kohno, Kiyoshi Yasui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of dsRNA-induced pancreatitis model reveals the regulatory role of IFN regulatory factor 2 (Irf2) in trypsinogen5 gene transcription."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1116273108"}], "href": "https://doi.org/10.1073/pnas.1116273108"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22042864"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22042864"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Qian Zhou, Jian Li, Wei Yue, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cell division cycle 23 is required for mouse oocyte meiotic maturation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.202000131R"}], "href": "https://doi.org/10.1096/fj.202000131R"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32449168"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32449168"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Huizhen Fan, Zhou Zhou, Wei Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Homozygous variants in CDC23 cause female infertility characterized by oocyte maturation defects."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Genet (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00439-023-02606-5"}], "href": "https://doi.org/10.1007/s00439-023-02606-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37768355"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37768355"}]}]}]}
|
| Synonyms | CD99L1, CXYORF12, MIC2R, NCRNA00103 |
| NCBI Gene ID | 401577 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CD99P1 has 1,527 functional associations with biological entities spanning 6 categories (molecular profile, organism, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 22 datasets.
Click the + buttons to view associations for CD99P1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of CD99P1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of CD99P1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of CD99P1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of CD99P1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CD99P1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of CD99P1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of CD99P1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at CD99P1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of CD99P1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of CD99P1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing CD99P1 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of CD99P1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of CD99P1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of CD99P1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of CD99P1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of CD99P1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CD99P1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of CD99P1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of CD99P1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of CD99P1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain CD99P1 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at CD99P1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |