CHIAP2 Gene

HGNC Family Chitinases (CHI)
Name chitinase, acidic pseudogene 2
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have revealed that pseudogenes can play crucial regulatory roles in human cancers. In lung adenocarcinoma (LUAD), an analysis of transcriptional alterations identified four dysregulated pseudogenes with strong prognostic significance, among which CHIAP2 was found to be the most closely associated with patient outcomes. In LUAD tissues, CHIAP2 is abnormally downregulated compared with normal tissues, and its enforced expression significantly impairs tumor cell proliferation and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMechanistic investigations using RNA sequencing (RNA-seq) and small RNA-seq further elucidated that overexpression of CHIAP2 leads to the downregulation of six microRNAs. The predicted target genes of these miRNAs are involved in critical pathways, including the WNT signaling cascade. Notably, CHIAP2 appears to exert its tumor-suppressive effects by modulating genes such as NFATC2 and GSK3B through miR-3614-5p and miR-873-3p, thereby impeding LUAD cell proliferation and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jun Shang, Zhongyu Wang, Wenjie Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pseudogene CHIAP2 inhibits proliferation and invasion of lung adenocarcinoma cells by means of the WNT pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Physiol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcp.28053"}], "href": "https://doi.org/10.1002/jcp.28053"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30623445"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30623445"}]}]}]}
NCBI Gene ID 149620
API
Download Associations
Predicted Functions View CHIAP2's ARCHS4 Predicted Functions.
Co-expressed Genes View CHIAP2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CHIAP2's ARCHS4 Predicted Functions.

Functional Associations

CHIAP2 has 195 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for CHIAP2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of CHIAP2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of CHIAP2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of CHIAP2 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of CHIAP2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of CHIAP2 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of CHIAP2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CHIAP2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain CHIAP2 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of CHIAP2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.