EBLN1 Gene

Name endogenous Bornavirus-like nucleoprotein 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Endogenized bornavirus‐like nucleoprotein 1 (EBLN1) appears to have evolved beyond its viral origin to acquire novel cellular roles. In a genome‐wide association study of abdominal fat traits, a locus encompassing EBLN1 together with MLLT10 and DNAJC1 was associated with subcutaneous adipose tissue in women, suggesting a potential link with metabolic regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Functional studies in human oligodendroglial cells have demonstrated that silencing EBLN1 expression markedly reduces cell proliferation, induces a G2/M cell cycle arrest, and promotes apoptosis. These changes are accompanied by widespread alterations in gene expression, particularly affecting cell cycle, MAP kinase, p53, and apoptotic pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Complementary experiments further reveal that depletion of EBLN1 leads to the accumulation of DNA damage, cell cycle abnormalities, disorganized microtubule structure, and premature centrosome splitting – defects that appear to stem in part from mislocalization of key nuclear envelope proteins, thereby implicating EBLN1 as a novel regulator of genome stability."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n At the evolutionary level, however, investigations into primate EBLN elements indicate that clear signatures of natural selection have not been observed since the divergence of Old World and New World monkeys. This suggests that while EBLN1’s cellular roles in proliferation, apoptosis, and genomic maintenance are supported by experimental evidence, its evolutionary conservation as a functional protein remains a subject for further study."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Y J Sung, L Pérusse, M A Sarzynski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association studies suggest sex-specific loci associated with abdominal and visceral fat."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Obes (Lond) (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ijo.2015.217"}], "href": "https://doi.org/10.1038/ijo.2015.217"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26480920"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26480920"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Peng He, Lin Sun, Dan Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knock-Down of Endogenous Bornavirus-Like Nucleoprotein 1 Inhibits Cell Growth and Induces Apoptosis in Human Oligodendroglia Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms17040435"}], "href": "https://doi.org/10.3390/ijms17040435"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27023521"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27023521"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Katie N Myers, Giancarlo Barone, Anil Ganesh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The bornavirus-derived human protein EBLN1 promotes efficient cell cycle transit, microtubule organisation and genome stability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep35548"}], "href": "https://doi.org/10.1038/srep35548"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27739501"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27739501"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Yuki Kobayashi, Masayuki Horie, Keizo Tomonaga, et al. "}, {"type": "b", "children": [{"type": "t", "text": "No evidence for natural selection on endogenous borna-like nucleoprotein elements after the divergence of Old World and New World monkeys."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0024403"}], "href": "https://doi.org/10.1371/journal.pone.0024403"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21912690"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21912690"}]}]}]}
Synonyms EBLN-1
Proteins EBLN1_HUMAN
NCBI Gene ID 340900
API
Download Associations
Predicted Functions View EBLN1's ARCHS4 Predicted Functions.
Co-expressed Genes View EBLN1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View EBLN1's ARCHS4 Predicted Functions.

Functional Associations

EBLN1 has 926 functional associations with biological entities spanning 7 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 26 datasets.

Click the + buttons to view associations for EBLN1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of EBLN1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of EBLN1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of EBLN1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of EBLN1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with EBLN1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of EBLN1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by EBLN1 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with EBLN1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with EBLN1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of EBLN1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of EBLN1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of EBLN1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of EBLN1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with EBLN1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
InterPro Predicted Protein Domain Annotations protein domains predicted for EBLN1 protein from the InterPro Predicted Protein Domain Annotations dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of EBLN1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of EBLN1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain EBLN1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of EBLN1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of EBLN1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at EBLN1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of EBLN1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of EBLN1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of EBLN1 gene from the RummaGEO Gene Perturbation Signatures dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of EBLN1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with EBLN1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.