EMC3-AS1 Gene

Name EMC3 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n EMC3‐AS1 is a long non‐coding RNA whose potential functions can be inferred through its co‐expression patterns with other transcripts. Recent advances in RNA‐seq–based co‐expression mapping—as implemented in the GeneFriends database—have enabled the inclusion of over 10,000 non‐coding RNAs alongside protein‐coding genes, thereby assisting in the assignment of putative roles to uncharacterized transcripts such as EMC3‐AS1. By applying a guilt‐by‐association approach, EMC3‐AS1 and its co‐expressed partners have been collectively linked to various biological processes and disease states, providing new insights into its possible regulatory involvement within complex gene networks."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sipko van Dam, Thomas Craig, João Pedro de Magalhães "}, {"type": "b", "children": [{"type": "t", "text": "GeneFriends: a human RNA-seq-based gene and transcript co-expression database."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gku1042"}], "href": "https://doi.org/10.1093/nar/gku1042"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25361971"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25361971"}]}]}]}
NCBI Gene ID 442075
API
Download Associations
Predicted Functions View EMC3-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View EMC3-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View EMC3-AS1's ARCHS4 Predicted Functions.

Functional Associations

EMC3-AS1 has 412 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for EMC3-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of EMC3-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of EMC3-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of EMC3-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with EMC3-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of EMC3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of EMC3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of EMC3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.