| Name | EMSY transcriptional repressor, BRCA2 interacting |
| Description | Predicted to enable identical protein binding activity. Predicted to be involved in DNA repair; chromatin organization; and regulation of DNA-templated transcription. Located in nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n EMSY is a large nuclear protein that plays multiple roles in chromatin‐ and transcription‐related processes, with important consequences in DNA repair and oncogenesis. Functionally, EMSY interacts directly with the N‐terminal region of BRCA2, thereby modulating its transactivation potential and influencing homologous recombination repair; indeed, EMSY overexpression can mimic BRCA2 deficiency and promote genomic instability, features that have been implicated in sporadic breast and ovarian cancers (1,9,10). Furthermore, EMSY is frequently amplified in these cancers and its increased expression is associated with poor clinical outcome, suggesting that it acts as an oncogene by interfering with normal DNA repair mechanisms (2,3,6,11). In addition to its effects on DNA repair, EMSY participates in transcriptional repression by forming complexes with chromatin regulators such as HP1β, BS69, and components of the Sin3/HDAC machinery; through these interactions, EMSY is recruited (for example by ETS‐1) to specific promoters where it delivers histone demethylases and suppresses the expression of tumor‐suppressive genes such as the antimetastatic microRNA miR‑31 (4,6). Moreover, EMSY is a phosphorylation substrate of Akt1, and this post‐translational modification relieves its repressive effects on interferon‐stimulated genes—a mechanism that may underlie aspects of immune regulation and contribute to the cellular response during viral infection and oncogenesis (5,7). Structural studies further reveal that EMSY contains domains capable of binding chromatin modifiers and mediating protein–protein interactions that are critical for its function in assembling repressive chromatin complexes (8). Collectively, the available data support a model in which EMSY, via its regulation of BRCA2 activity, chromatin signaling, and transcriptional repression, contributes to tumor development, influences patient prognosis, and may even affect responses to chemotherapy, particularly in cancers with homologous recombination defects (1,2,3,9,10,11).\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", (2)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", (3)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", (4)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", (5)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": ", (6)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", (7)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ", (8)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", (9)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", (10)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": ", (11)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Luke Hughes-Davies, David Huntsman, Margarida Ruas, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Amplification of 11q13 in ovarian carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Chromosomes Cancer (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/gcc.20549"}], "href": "https://doi.org/10.1002/gcc.20549"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18314909"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18314909"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Lindsay A Brown, Julie Irving, Robin Parker, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Amplification of EMSY, a novel oncogene on 11q13, in high grade ovarian surface epithelial carcinomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gynecol Oncol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ygyno.2005.08.026"}], "href": "https://doi.org/10.1016/j.ygyno.2005.08.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16236351"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16236351"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Shivani Garapaty, Chong-Feng Xu, Patrick Trojer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification and characterization of a novel nuclear protein complex involved in nuclear hormone receptor-mediated gene regulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M805872200"}], "href": "https://doi.org/10.1074/jbc.M805872200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19131338"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19131338"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Scott A Ezell, Christos Polytarchou, Maria Hatziapostolou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The protein kinase Akt1 regulates the interferon response through phosphorylation of the transcriptional repressor EMSY."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1115029109"}], "href": "https://doi.org/10.1073/pnas.1115029109"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22315412"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22315412"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Emmanuelle Viré, Christina Curtis, Veronica Davalos, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The breast cancer oncogene EMSY represses transcription of antimetastatic microRNA miR-31."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2014.01.029"}], "href": "https://doi.org/10.1016/j.molcel.2014.01.029"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24582497"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24582497"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Antonio Marzio, Emma Kurz, Jennifer M Sahni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "EMSY inhibits homologous recombination repair and the interferon response, promoting lung cancer immune evasion."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cell.2021.12.005"}], "href": "https://doi.org/10.1016/j.cell.2021.12.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34963055"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34963055"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Ying Huang, Michael P Myers, Rui-Ming Xu "}, {"type": "b", "children": [{"type": "t", "text": "Crystal structure of the HP1-EMSY complex reveals an unusual mode of HP1 binding."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Structure (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.str.2006.01.007"}], "href": "https://doi.org/10.1016/j.str.2006.01.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16615912"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16615912"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Caroline M S Ekblad, Gayatri B Chavali, Balaka P Basu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Binding of EMSY to HP1beta: implications for recruitment of HP1beta and BS69."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.embor.7400415"}], "href": "https://doi.org/10.1038/sj.embor.7400415"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15947784"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15947784"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Isabelle Cousineau, Abdellah Belmaaza "}, {"type": "b", "children": [{"type": "t", "text": "EMSY overexpression disrupts the BRCA2/RAD51 pathway in the DNA-damage response: implications for chromosomal instability/recombination syndromes as checkpoint diseases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Genet Genomics (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00438-011-0612-5"}], "href": "https://doi.org/10.1007/s00438-011-0612-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21409565"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21409565"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Robert L Hollis, Michael Churchman, Caroline O Michie, et al. "}, {"type": "b", "children": [{"type": "t", "text": "High EMSY expression defines a BRCA-like subgroup of high-grade serous ovarian carcinoma with prolonged survival and hypersensitivity to platinum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cncr.32079"}], "href": "https://doi.org/10.1002/cncr.32079"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31154673"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31154673"}]}]}]}
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| NCBI Gene ID | 56946 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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EMSY has 2,461 functional associations with biological entities spanning 5 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 39 datasets.
Click the + buttons to view associations for EMSY from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of EMSY gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of EMSY gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with EMSY protein from the CCLE Cell Line Proteomics dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with EMSY gene from the CellMarker Gene-Cell Type Associations dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of EMSY gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of EMSY gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| CM4AI U2OS Cell Map Protein Localization Assemblies | assemblies containing EMSY protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with EMSY protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by EMSY gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DGIdb Drug Targets 2026 | interacting drugs for EMSY protein from the DGIdb Drug Targets 2026 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with EMSY gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with EMSY gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with EMSY gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with EMSY gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| GlyGen Glycosylated Proteins | ligands (chemical) binding EMSY protein from the GlyGen Glycosylated Proteins dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of EMSY gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of EMSY gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with EMSY gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by EMSY gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of EMSY gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of EMSY gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of EMSY gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by EMSY gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of EMSY gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of EMSY gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving EMSY protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving EMSY protein from the Wikipathways PFOCR 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of EMSY gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of EMSY gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of EMSY gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of EMSY gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of EMSY gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of EMSY gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of EMSY gene from the Sci-Plex Drug Perturbation Signatures dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of EMSY gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of EMSY protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of EMSY protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with EMSY protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2024 | pathways involving EMSY protein from the WikiPathways Pathways 2024 dataset. | |