| Name | ferredoxin 2 |
| Description | This gene encodes a member of the ferredoxin family. The encoded protein contains a 2Fe-2S ferredoxin-type domain and is essential for heme A and Fe/S protein biosynthesis. Mutation in FDX1L gene is associated with mitochondrial muscle myopathy. [provided by RefSeq, Sep 2014] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Mitochondrial ferredoxin 2 (FDX2) has emerged as a specialized electron‐carrier that is essential for the biogenesis of iron–sulfur (Fe/S) clusters and heme A, thereby supporting the maturation of critical mitochondrial proteins. Unlike its paralog FDX1—which primarily facilitates electron transfer to cytochrome P450 enzymes in steroidogenesis—FDX2 specifically interacts with the cysteine desulfurase complex and scaffold proteins to drive the reductive assembly and fusion of [2Fe–2S] clusters into functional Fe/S centers."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In vitro studies demonstrate that FDX2 binds more tightly to the cluster‐assembly machinery and supports a faster rate of cluster formation than FDX1, a property that is linked to its distinct conformational dynamics and substrate specificity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Genetic and clinical investigations further highlight the non‐redundant role of FDX2: mutations in the FDX1L gene (encoding FDX2) are associated with mitochondrial myopathy, episodic rhabdomyolysis, and complex neurological syndromes, underscoring its critical in vivo function in Fe/S protein maturation and cellular iron homeostasis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": " Moreover, electron transfer from FDX2 has been shown to be indispensable in mediating the reductive fusion step required for the generation of [4Fe–4S] clusters, a role that cannot be compensated by other reducing systems or by FDX1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Beyond its physiological significance, FDX2 can also serve as an effective redox partner in specific cytochrome P450 systems, highlighting its potential utility in biotechnological applications."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Collectively, these studies establish FDX2 as a distinct, non‐redundant mitochondrial ferredoxin that is vital for Fe/S cluster assembly, mitochondrial energy metabolism, and maintenance of cellular iron balance.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Alex D Sheftel, Oliver Stehling, Antonio J Pierik, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Humans possess two mitochondrial ferredoxins, Fdx1 and Fdx2, with distinct roles in steroidogenesis, heme, and Fe/S cluster biosynthesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1004250107"}], "href": "https://doi.org/10.1073/pnas.1004250107"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20547883"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20547883"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yanbo Shi, Manik Ghosh, Gennadiy Kovtunovych, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Both human ferredoxins 1 and 2 and ferredoxin reductase are important for iron-sulfur cluster biogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbamcr.2011.11.002"}], "href": "https://doi.org/10.1016/j.bbamcr.2011.11.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22101253"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22101253"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Kai Cai, Marco Tonelli, Ronnie O Frederick, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Human Mitochondrial Ferredoxin 1 (FDX1) and Ferredoxin 2 (FDX2) Both Bind Cysteine Desulfurase and Donate Electrons for Iron-Sulfur Cluster Biosynthesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochemistry (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/acs.biochem.6b00447"}], "href": "https://doi.org/10.1021/acs.biochem.6b00447"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28001042"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28001042"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wenbin Qi, Jingwei Li, J A Cowan "}, {"type": "b", "children": [{"type": "t", "text": "Human ferredoxin-2 displays a unique conformational change."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dalton Trans (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1039/c2dt32018e"}], "href": "https://doi.org/10.1039/c2dt32018e"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23208207"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23208207"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Ronen Spiegel, Ann Saada, Jonatan Halvardson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deleterious mutation in FDX1L gene is associated with a novel mitochondrial muscle myopathy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Hum Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ejhg.2013.269"}], "href": "https://doi.org/10.1038/ejhg.2013.269"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24281368"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24281368"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Juliana Gurgel-Giannetti, David S Lynch, Anderson Rodrigues Brandão de Paiva, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel complex neurological phenotype due to a homozygous mutation in FDX2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/brain/awy172"}], "href": "https://doi.org/10.1093/brain/awy172"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30010796"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30010796"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Anjali Aggarwal, Nishitha R Pillai, Charles J Billington, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Rare presentation of FDX2-related disorder and untargeted global metabolomics findings."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Med Genet A (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/ajmg.a.62608"}], "href": "https://doi.org/10.1002/ajmg.a.62608"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34905296"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34905296"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Benjamin Dennis Weiler, Marie-Christin Brück, Isabell Kothe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mitochondrial [4Fe-4S] protein assembly involves reductive [2Fe-2S] cluster fusion on ISCA1-ISCA2 by electron flow from ferredoxin FDX2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.2003982117"}], "href": "https://doi.org/10.1073/pnas.2003982117"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32817474"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32817474"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Holger Webert, Sven-Andreas Freibert, Angelo Gallo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional reconstitution of mitochondrial Fe/S cluster synthesis on Isu1 reveals the involvement of ferredoxin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms6013"}], "href": "https://doi.org/10.1038/ncomms6013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25358379"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25358379"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Mohammed Milhim, Natalia Putkaradze, Ammar Abdulmughni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of a new plasmid-encoded cytochrome P450 CYP107DY1 from Bacillus megaterium with a catalytic activity towards mevastatin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biotechnol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jbiotec.2016.11.002"}], "href": "https://doi.org/10.1016/j.jbiotec.2016.11.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27816653"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27816653"}]}]}]}
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| NCBI Gene ID | 112812 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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FDX2 has 1,181 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 33 datasets.
Click the + buttons to view associations for FDX2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of FDX2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with FDX2 protein from the CCLE Cell Line Proteomics dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of FDX2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| ClinVar Gene-Phenotype Associations 2025 | phenotypes associated with FDX2 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing FDX2 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with FDX2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with FDX2 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with FDX2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with FDX2 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with FDX2 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving FDX2 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving FDX2 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing FDX2 protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing FDX2 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of FDX2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of FDX2 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with FDX2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by FDX2 gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of FDX2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of FDX2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by FDX2 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of FDX2 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of FDX2 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving FDX2 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving FDX2 protein from the Wikipathways PFOCR 2024 dataset. | |
| Reactome Pathways 2024 | pathways involving FDX2 protein from the Reactome Pathways 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of FDX2 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of FDX2 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of FDX2 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of FDX2 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of FDX2 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of FDX2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with FDX2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |