FXYD6-FXYD2 Gene

Name FXYD6-FXYD2 readthrough
Description This locus represents naturally occurring read-through transcription between the neighboring FXYD domain-containing ion transport regulator 6 (GeneID 53826) and sodium/potassium-transporting ATPase subunit gamma (GeneID 486) genes on chromosome 11. One read-through transcript produces a fusion protein that shares sequence identity with each individual gene product, while another read-through transcript encodes a protein that has a distinct C-terminus and only shares sequence identity with the upstream locus (GeneID 53826). [provided by RefSeq, Aug 2011]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Members of the FXYD family, in particular FXYD6 and FXYD2, are important tissue‐specific regulators of the Na<sup>+</sup>,K<sup>+</sup>‐ATPase that adjust its ion‐transport kinetics and trafficking to meet local physiological needs. FXYD6 is highly expressed in the central nervous system and sensory epithelia, where it associates with the Na<sup>+</sup>,K<sup>+</sup> pump to modify its apparent affinity for Na<sup>+</sup> and K<sup>+</sup> and to accelerate pump turnover rates, thereby contributing to the generation and maintenance of critical ion gradients in neurons and in the inner ear (see."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": " In the inner ear, FXYD6 is localized to epithelia that border the endolymphatic space, suggesting a role in regulating endolymph composition and thereby contributing to proper auditory function. Furthermore, proper dendritic mRNA localization of FXYD6 is important for synaptic development and neuronal network maintenance. Altered expression of FXYD6 has also been implicated in disease; for instance, its up‐regulation is observed in hepatocellular carcinoma and its deregulation in osteosarcoma (through interactions with microRNAs such as miR‑137 and miR‑372‑3p) appears to affect tumor cell proliferation and migration."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": " Additionally, genetic studies have explored the potential link between FXYD6 and neuropsychiatric disorders such as schizophrenia"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ", although the findings have not been entirely consistent. In contrast, FXYD2 is predominantly expressed in renal epithelial cells, where it modulates Na<sup>+</sup>,K<sup>+</sup>-ATPase activity by altering the local membrane electrostatics near the ion binding sites, thereby ensuring proper ion homeostasis in the kidney."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Collectively, these findings underscore the diverse yet critical roles of FXYD6 and FXYD2 in adjusting Na<sup>+</sup>,K<sup>+</sup>-ATPase functions to the specific demands of different tissues, with implications in sensory physiology, neuronal function, cancer progression, and renal ion transport.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Benjamin Delprat, Danièle Schaer, Sophie Roy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FXYD6 is a novel regulator of Na,K-ATPase expressed in the inner ear."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M609872200"}], "href": "https://doi.org/10.1074/jbc.M609872200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17209044"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17209044"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Benjamin Delprat, Jean-Luc Puel, Käthi Geering "}, {"type": "b", "children": [{"type": "t", "text": "Dynamic expression of FXYD6 in the inner ear suggests a role of the protein in endolymph homeostasis and neuronal activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Dyn (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/dvdy.21269"}], "href": "https://doi.org/10.1002/dvdy.21269"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17676640"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17676640"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Nobuyuki Shiina, Kazuhiko Yamaguchi, Makio Tokunaga "}, {"type": "b", "children": [{"type": "t", "text": "RNG105 deficiency impairs the dendritic localization of mRNAs for Na+/K+ ATPase subunit isoforms and leads to the degeneration of neuronal networks."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.6386-09.2010"}], "href": "https://doi.org/10.1523/JNEUROSCI.6386-09.2010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20861386"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20861386"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Dylan J Meyer, Sharan Bijlani, Marilina de Sautu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FXYD protein isoforms differentially modulate human Na/K pump function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gen Physiol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1085/jgp.202012660"}], "href": "https://doi.org/10.1085/jgp.202012660"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33231612"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33231612"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Qian Gao, Xiongfei Chen, Hongxia Duan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FXYD6: a novel therapeutic target toward hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Protein Cell (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13238-014-0045-0"}], "href": "https://doi.org/10.1007/s13238-014-0045-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24715268"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24715268"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zheng-Min Li, Hong-Yan Zhang, Yu-Xue Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-137 is downregulated in human osteosarcoma and regulates cell proliferation and migration through targeting FXYD6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Drug Target (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3109/1061186X.2015.1057149"}], "href": "https://doi.org/10.3109/1061186X.2015.1057149"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26302771"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26302771"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "S-Y Xu, P-F Xu, T-T Gao "}, {"type": "b", "children": [{"type": "t", "text": "MiR-372-3p inhibits the growth and metastasis of osteosarcoma cells by targeting FXYD6."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201801_14101"}], "href": "https://doi.org/10.26355/eurrev_201801_14101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29364472"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29364472"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Khalid Choudhury, Andrew McQuillin, Vinay Puri, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A genetic association study of chromosome 11q22-24 in two different samples implicates the FXYD6 gene, encoding phosphohippolin, in susceptibility to schizophrenia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1086/513475"}], "href": "https://doi.org/10.1086/513475"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17357072"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17357072"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Xiao-Min Gong, Yi Ding, Jinghua Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structure of the Na,K-ATPase regulatory protein FXYD2b in micelles: implications for membrane-water interfacial arginines."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbamem.2014.04.021"}], "href": "https://doi.org/10.1016/j.bbamem.2014.04.021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24794573"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24794573"}]}]}]}
Synonyms FXYD6
NCBI Gene ID 100533181
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Download Associations
Predicted Functions View FXYD6-FXYD2's ARCHS4 Predicted Functions.
Co-expressed Genes View FXYD6-FXYD2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View FXYD6-FXYD2's ARCHS4 Predicted Functions.

Functional Associations

FXYD6-FXYD2 has 2,073 functional associations with biological entities spanning 8 categories (molecular profile, organism, chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 37 datasets.

Click the + buttons to view associations for FXYD6-FXYD2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of FXYD6-FXYD2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of FXYD6-FXYD2 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of FXYD6-FXYD2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with FXYD6-FXYD2 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of FXYD6-FXYD2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with FXYD6-FXYD2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of FXYD6-FXYD2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with FXYD6-FXYD2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with FXYD6-FXYD2 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at FXYD6-FXYD2 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of FXYD6-FXYD2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of FXYD6-FXYD2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GO Biological Process Annotations 2025 biological processes involving FXYD6-FXYD2 gene from the curated GO Biological Process Annotations2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by FXYD6-FXYD2 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of FXYD6-FXYD2 gene from the GTEx eQTL 2025 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with FXYD6-FXYD2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of FXYD6-FXYD2 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of FXYD6-FXYD2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of FXYD6-FXYD2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of FXYD6-FXYD2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of FXYD6-FXYD2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Curated Protein Localization Annotations cellular components containing FXYD6-FXYD2 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain FXYD6-FXYD2 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of FXYD6-FXYD2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of FXYD6-FXYD2 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of FXYD6-FXYD2 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at FXYD6-FXYD2 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of FXYD6-FXYD2 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of FXYD6-FXYD2 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of FXYD6-FXYD2 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of FXYD6-FXYD2 gene from the Sci-Plex Drug Perturbation Signatures dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of FXYD6-FXYD2 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of FXYD6-FXYD2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with FXYD6-FXYD2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.
Virus MINT Protein-Viral Protein Interactions interacting viral proteins for FXYD6-FXYD2 from the Virus MINT Protein-Viral Protein Interactions dataset.
Virus MINT Protein-Virus Interactions viruses interacting with FXYD6-FXYD2 from the Virus MINT Protein-Virus Interactions dataset.
WikiPathways Pathways 2014 pathways involving FXYD6-FXYD2 protein from the Wikipathways Pathways 2014 dataset.