GOLGA2P2Y Gene

Name golgin A2 pseudogene 2, Y-linked
Description There are two copies of this pseudogene within the P1 palindrome on chromosome Y. This record represents the more centromeric copy. [provided by RefSeq, Jul 2008]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nWithin the AZFc region of the human Y chromosome, the gene GOLGA2LY exists in two copies—GOLGA2P2Y and GOLGA2P3Y—with research specifically interrogating their roles in spermatogenesis. Recent findings indicate that deletion of GOLGA2P2Y occurs at comparable frequencies in both oligozoospermic and normozoospermic men, suggesting that loss of this copy is not significantly associated with decreased sperm concentration or motility. In contrast, deletion of its paralogue, GOLGA2P3Y, is linked to reduced sperm parameters and an increased susceptibility to oligozoospermia, particularly in individuals with gr/gr rearrangements. Thus, while GOLGA2P2Y is a constituent of the multicopy gene set in the AZFc locus, its deletion does not appear to adversely influence male fertility as markedly as that of GOLGA2P3Y."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sanjukta Sen, Rupesh Agarwal, Prafulla Ambulkar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of GOLGA2P3Y but not GOLGA2P2Y is a risk factor for oligozoospermia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Reprod Biomed Online (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.rbmo.2015.11.001"}], "href": "https://doi.org/10.1016/j.rbmo.2015.11.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26655651"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26655651"}]}]}]}
Synonyms GOLGA2LY, GOLGA2LY1, GOLGA2P2
NCBI Gene ID 84559
API
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Predicted Functions View GOLGA2P2Y's ARCHS4 Predicted Functions.
Co-expressed Genes View GOLGA2P2Y's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View GOLGA2P2Y's ARCHS4 Predicted Functions.

Functional Associations

GOLGA2P2Y has 126 functional associations with biological entities spanning 5 categories (molecular profile, organism, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.

Click the + buttons to view associations for GOLGA2P2Y from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
BioGPS Human Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of GOLGA2P2Y gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of GOLGA2P2Y gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of GOLGA2P2Y gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of GOLGA2P2Y gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of GOLGA2P2Y gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of GOLGA2P2Y gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain GOLGA2P2Y protein from the LOCATE Predicted Protein Localization Annotations dataset.