| Name | heterogeneous nuclear ribonucleoprotein C-like 4 |
| Description | Predicted to enable RNA binding activity. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n HNRNPCL proteins have emerged as multifunctional RNA‐binding regulators that appear to contribute to tumor progression through diverse mechanisms. In colorectal cancer, for example, a family member known as RALY (hnRNPCL2) functions as a key component of the Drosha complex to facilitate the processing of specific microRNAs that ultimately reprogramme mitochondrial metabolism and promote tumor aggressiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, high‐frequency mutations affecting another family member, HNRNPCL1, have been identified in endometrial cancer, suggesting that genetic alterations within the hnRNPCL family may be relevant to tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In an independent study exploring biomarkers in medulloblastoma, a set of heterogeneous nuclear ribonucleoproteins—including HNRNPCL4—was uniquely detected in the extracellular microvesicles shed by aggressive, stem‐like tumor cells that exhibit activation of oncogenic signaling cascades such as ERK, PI3K/AKT/mTOR, EGF/EGFR, and stem cell self‐renewal."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Although a separate abstract focused on caerin peptides does not directly address the functional roles of HNRNPCL proteins"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", the collective evidence indicates that HNRNPCL4—in the context of medulloblastoma—may be involved in facilitating intercellular communication and modulating oncogenic pathways. Its specific enrichment within tumor‐derived microvesicles underscores its potential utility as a biomarker for aggressive disease and early detection of relapse, while also highlighting that mechanistic insights gleaned from other hnRNPCL family members may inform future studies on HNRNPCL4.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lei Sun, Arabella Wan, Zhuolong Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RNA-binding protein RALY reprogrammes mitochondrial metabolism via mediating miRNA processing in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gut (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/gutjnl-2020-320652"}], "href": "https://doi.org/10.1136/gutjnl-2020-320652"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33219048"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33219048"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yuan Gao, Xiuping Zhang, Tian Wang, et al. "}, {"type": "b", "children": [{"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "HNRNPCL1, PRAMEF1, CFAP74"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": ", and "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "DFFB"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": ": Common Potential Biomarkers for Sporadic and Suspected Lynch Syndrome Endometrial Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Manag Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/CMAR.S262421"}], "href": "https://doi.org/10.2147/CMAR.S262421"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33177874"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33177874"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Carolini Kaid, Amanda Assoni, Marina Marçola, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Proteome and miRNome profiling of microvesicles derived from medulloblastoma cell lines with stem-like properties reveals biomarkers of poor prognosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2020.146646"}], "href": "https://doi.org/10.1016/j.brainres.2020.146646"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31917138"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31917138"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Guoying Ni, Di Liang, Scott F Cummins, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comparative Proteomic Study of the Antiproliferative Activity of Frog Host-Defence Peptide Caerin 1.9 and Its Additive Effect with Caerin 1.1 on TC-1 Cells Transformed with HPV16 E6 and E7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Res Int (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2018/7382351"}], "href": "https://doi.org/10.1155/2018/7382351"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29862288"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29862288"}]}]}]}
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| Proteins | HNRC4_HUMAN |
| NCBI Gene ID | 101060301 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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HNRNPCL4 has 312 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for HNRNPCL4 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of HNRNPCL4 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of HNRNPCL4 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with HNRNPCL4 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with HNRNPCL4 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing HNRNPCL4 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of HNRNPCL4 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| KEGG Pathways 2026 | pathways involving HNRNPCL4 protein from the KEGG Pathways 2026 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of HNRNPCL4 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of HNRNPCL4 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of HNRNPCL4 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with HNRNPCL4 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |