| Name | heat shock transcription factor, Y-linked 1 pseudogene 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided studies explicitly mention HSFY1P1, the collective evidence from these abstracts illustrates critical metabolic roles played by key enzymes—in particular, ornithine aminotransferase (OAT)—which may serve as a conceptual framework for studying related or nearby loci such as HSFY1P1. In the liver, for example, zonal gene expression is tightly regulated by factors such as HNF4α; OAT is co‐expressed with other metabolic enzymes in a pericentral pattern, and loss of HNF4α function leads to ectopic, albeit lower‐level, OAT expression in periportal hepatocytes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn pancreatic ductal adenocarcinoma, enhanced de novo ornithine synthesis mediated by OAT supports polyamine production essential for tumor growth. This metabolic rewiring is driven by mutant KRAS and occurs in an environment where arginine is limited, suggesting that enzymes in this pathway are potential therapeutic targets."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In a similar metabolic context, studies in murine kidney have shown that OAT expression is subject to hormonal regulation. Testosterone downregulates OAT while inversely upregulating enzymes that direct ornithine toward putrescine production; moreover, a striking sexual dimorphism exists wherein female kidneys express OAT at significantly higher levels compared with males."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional research in conditions of metabolic stress and disease further underscores OAT’s importance. In endotoxemia models, LPS treatment inhibits hepatic OAT expression and activity, highlighting its role in balancing arginine and glutamine metabolism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In idiopathic pulmonary fibrosis, elevated OAT levels in fibroblasts drive mitochondrial reactive oxygen species production and subsequent TGF-β1 pathway activation, thereby promoting fibrogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Finally, observations in fungal and mammalian systems indicate that altered OAT abundance may disrupt arginine and histidine homeostasis, with repercussions for urea cycle function and polyamine synthesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nTaken together, while HSFY1P1 is not directly discussed in these studies, the detailed elucidation of OAT’s roles in tissue-specific metabolism, hormonal responsiveness, and disease-related remodeling suggests that any functional exploration of HSFY1P1 may benefit from considering its potential impact on similar metabolic pathways—particularly those involving the interconversion of amino acids and regulation of polyamine synthesis. \n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Vesna S Stanulović, Irene Kyrmizi, Marianna Kruithof-de Julio, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hepatic HNF4alpha deficiency induces periportal expression of glutamine synthetase and other pericentral enzymes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hepatology (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/hep.21456"}], "href": "https://doi.org/10.1002/hep.21456"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17256722"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17256722"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Min-Sik Lee, Courtney Dennis, Insia Naqvi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ornithine aminotransferase supports polyamine synthesis in pancreatic cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41586-023-05891-2"}], "href": "https://doi.org/10.1038/s41586-023-05891-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36991126"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36991126"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Olivier Levillain, Jean-Jacques Diaz, Odile Blanchard, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Testosterone down-regulates ornithine aminotransferase gene and up-regulates arginase II and ornithine decarboxylase genes for polyamines synthesis in the murine kidney."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2004-1199"}], "href": "https://doi.org/10.1210/en.2004-1199"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15539552"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15539552"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Olivier Levillain, Gabrielle Ventura, Henri Déchaud, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sex-differential expression of ornithine aminotransferase in the mouse kidney."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.00408.2006"}], "href": "https://doi.org/10.1152/ajprenal.00408.2006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17341717"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17341717"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Gabrielle Ventura, C Moinard, F Segaud, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Adaptative response of nitrogen metabolism in early endotoxemia: role of ornithine aminotransferase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Amino Acids (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00726-010-0601-8"}], "href": "https://doi.org/10.1007/s00726-010-0601-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20549270"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20549270"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Jong-Uk Lee, Ki Sung Song, Jisu Hong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of lung ornithine aminotransferase in idiopathic pulmonary fibrosis: regulation of mitochondrial ROS generation and TGF-β1 activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Mol Med (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s12276-024-01170-w"}], "href": "https://doi.org/10.1038/s12276-024-01170-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38413821"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38413821"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jana Key, Suzana Gispert, Arvind Reddy Kandi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CLPP-Null Eukaryotes with Excess Heme Biosynthesis Show Reduced L-arginine Levels, Probably via CLPX-Mediated OAT Activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomolecules (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/biom14020241"}], "href": "https://doi.org/10.3390/biom14020241"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38397478"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38397478"}]}]}]}
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| Synonyms | NCRNA00016, CECR8, HSFYL1, HSFYP1 |
| NCBI Gene ID | 27437 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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HSFY1P1 has 302 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for HSFY1P1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of HSFY1P1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of HSFY1P1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of HSFY1P1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of HSFY1P1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at HSFY1P1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of HSFY1P1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of HSFY1P1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of HSFY1P1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of HSFY1P1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of HSFY1P1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at HSFY1P1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of HSFY1P1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |