LINC00672 Gene

Name long intergenic non-protein coding RNA 672
Description Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00672 is a long intergenic noncoding RNA that has emerged as a context‐dependent regulator in several disease settings. In endometrial cancer, LINC00672 is classified as a tumor‐suppressive lncRNA that may modulate key oncogenic signaling pathways—including the PTEN/PI3K/AKT/mTOR cascade—and thereby influence tumor progression and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In lung adenocarcinoma, LINC00672 is one component of a metastasis‐associated lncRNA signature; its regulatory role appears linked to cell mobility and thus to relapse‐free survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In the context of metastasized colorectal cancer, mutations in LINC00672 have been associated with treatment response, suggesting that genomic alterations affecting this lncRNA can have clinical relevance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Furthermore, in Alzheimer’s disease, reduced expression of LINC00672 is negatively correlated with disease severity as measured by Braak stage, implying a potential protective role in neurodegeneration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings position LINC00672 as a multifaceted regulator whose dysregulation may impact cellular proliferation, migration, and responsiveness to therapeutic interventions across diverse pathological conditions."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Peixin Dong, Ying Xiong, Junming Yue, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exploring lncRNA-Mediated Regulatory Networks in Endometrial Cancer Cells and the Tumor Microenvironment: Advances and Challenges."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancers (Basel) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cancers11020234"}], "href": "https://doi.org/10.3390/cancers11020234"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30781521"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30781521"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaoshi Zhang, Jingyi Han, Lutao Du, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unique metastasis-associated lncRNA signature optimizes prediction of tumor relapse in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Thorac Cancer (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/1759-7714.13325"}], "href": "https://doi.org/10.1111/1759-7714.13325"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31994347"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31994347"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Pauline A J Mendelaar, Marcel Smid, Job van Riet, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Whole genome sequencing of metastatic colorectal cancer reveals prior treatment effects and specific metastasis features."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-020-20887-6"}], "href": "https://doi.org/10.1038/s41467-020-20887-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33495476"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33495476"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Mei Cao, Huaqing Li, Jian Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of age- and gender-associated long noncoding RNAs in the human brain with Alzheimer's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2019.05.023"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2019.05.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31280115"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31280115"}]}]}]}
NCBI Gene ID 100505576
API
Download Associations
Predicted Functions View LINC00672's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00672's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00672's ARCHS4 Predicted Functions.

Functional Associations

LINC00672 has 795 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for LINC00672 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00672 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00672 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of LINC00672 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00672 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of LINC00672 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.