| Name | long intergenic non-protein coding RNA 672 |
| Description | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00672 is a long intergenic noncoding RNA that has emerged as a context‐dependent regulator in several disease settings. In endometrial cancer, LINC00672 is classified as a tumor‐suppressive lncRNA that may modulate key oncogenic signaling pathways—including the PTEN/PI3K/AKT/mTOR cascade—and thereby influence tumor progression and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In lung adenocarcinoma, LINC00672 is one component of a metastasis‐associated lncRNA signature; its regulatory role appears linked to cell mobility and thus to relapse‐free survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In the context of metastasized colorectal cancer, mutations in LINC00672 have been associated with treatment response, suggesting that genomic alterations affecting this lncRNA can have clinical relevance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Furthermore, in Alzheimer’s disease, reduced expression of LINC00672 is negatively correlated with disease severity as measured by Braak stage, implying a potential protective role in neurodegeneration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings position LINC00672 as a multifaceted regulator whose dysregulation may impact cellular proliferation, migration, and responsiveness to therapeutic interventions across diverse pathological conditions."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Peixin Dong, Ying Xiong, Junming Yue, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exploring lncRNA-Mediated Regulatory Networks in Endometrial Cancer Cells and the Tumor Microenvironment: Advances and Challenges."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancers (Basel) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cancers11020234"}], "href": "https://doi.org/10.3390/cancers11020234"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30781521"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30781521"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaoshi Zhang, Jingyi Han, Lutao Du, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unique metastasis-associated lncRNA signature optimizes prediction of tumor relapse in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Thorac Cancer (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/1759-7714.13325"}], "href": "https://doi.org/10.1111/1759-7714.13325"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31994347"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31994347"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Pauline A J Mendelaar, Marcel Smid, Job van Riet, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Whole genome sequencing of metastatic colorectal cancer reveals prior treatment effects and specific metastasis features."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-020-20887-6"}], "href": "https://doi.org/10.1038/s41467-020-20887-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33495476"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33495476"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Mei Cao, Huaqing Li, Jian Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of age- and gender-associated long noncoding RNAs in the human brain with Alzheimer's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2019.05.023"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2019.05.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31280115"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31280115"}]}]}]}
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| NCBI Gene ID | 100505576 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00672 has 795 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for LINC00672 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of LINC00672 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00672 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00672 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00672 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00672 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of LINC00672 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of LINC00672 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |