LINC00675 Gene

Name long intergenic non-protein coding RNA 675
Description Involved in intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress. Located in endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00675 is a long non‐coding RNA whose dysregulation has been implicated in the pathogenesis of multiple cancer types, although its role appears to be highly context‐dependent. In certain cancers such as gastric cancer, colorectal cancer, bladder cancer, esophageal squamous cell carcinoma, and hepatocellular carcinoma, LINC00675 is frequently downregulated and acts as a tumor suppressor. In these settings, reduced expression of LINC00675 is associated with increased cell proliferation, migration, invasion, epithelial–mesenchymal transition, and metastasis through modulation of key signaling pathways including the Wnt/β‐catenin pathway and alterations in cytoskeletal components (e.g., via interaction with vimentin)."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": " In contrast, in malignancies such as pancreatic ductal adenocarcinoma, glioma, and castration‐resistant prostate cancer, LINC00675 is overexpressed and appears to promote oncogenic processes by enhancing tumor cell proliferation, invasion, metastasis, and therapeutic resistance, potentially through modulation of androgen receptor signaling and stabilization of oncogenic mRNAs."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "8"}]}, {"type": "t", "text": " Moreover, in oral squamous cell carcinoma and breast cancer, LINC00675 functions as a competing endogenous RNA—sponging oncogenic microRNAs—to bolster the expression of tumor suppressor genes such as RCAN1 and PTEN, thereby inhibiting malignant progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Finally, meta‐analyses and integrative genomic studies further support the prognostic value of LINC00675, with its aberrant expression levels correlating with advanced tumor stage, metastasis, and overall survival in several tumor types."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings indicate that LINC00675 may function either as a tumor suppressor or an oncogene depending on the cellular context, and its expression status could serve as a valuable diagnostic and prognostic biomarker as well as a potential therapeutic target in cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shuo Zeng, Xia Xie, Yu-Feng Xiao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA LINC00675 enhances phosphorylation of vimentin on Ser83 to suppress gastric cancer progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.canlet.2017.10.026"}], "href": "https://doi.org/10.1016/j.canlet.2017.10.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29107103"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29107103"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Zhiming Shan, Na An, Jielin Qin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA Linc00675 suppresses cell proliferation and metastasis in colorectal cancer via acting on miR-942 and Wnt/β-catenin signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2018.02.123"}], "href": "https://doi.org/10.1016/j.biopha.2018.02.123"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29524886"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29524886"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xing Liu, Jingwei Ke, Li Gu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00675 is associated with bladder cancer metastasis and patient survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gene Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jgm.3210"}], "href": "https://doi.org/10.1002/jgm.3210"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32367602"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32367602"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Y-B Zhong, A-J Shan, W Lv, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC00675 inhibits tumorigenesis and EMT via repressing Wnt/β-catenin signaling in esophageal squamous cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201812_16526"}], "href": "https://doi.org/10.26355/eurrev_201812_16526"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30556869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30556869"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Libai Lu, Shubo Li, Ying Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "GFI1-Mediated Upregulation of LINC00675 as a ceRNA Restrains Hepatocellular Carcinoma Metastasis by Sponging miR-942-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fonc.2020.607593"}], "href": "https://doi.org/10.3389/fonc.2020.607593"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33489916"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33489916"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Dou-Dou Li, Zhi-Qiang Fu, Qing Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Linc00675 is a novel marker of short survival and recurrence in patients with pancreatic ductal adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "World J Gastroenterol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3748/wjg.v21.i31.9348"}], "href": "https://doi.org/10.3748/wjg.v21.i31.9348"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26309360"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26309360"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Zhibing Li, Yijian Li, Qibai Wang "}, {"type": "b", "children": [{"type": "t", "text": "LINC00675 is a prognostic factor and regulates cell proliferation, migration and invasion in glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biosci Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BSR20181039"}], "href": "https://doi.org/10.1042/BSR20181039"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30061182"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30061182"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Mengfei Yao, Xiaolei Shi, Yue Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00675 activates androgen receptor axis signaling pathway to promote castration-resistant prostate cancer progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-020-02856-5"}], "href": "https://doi.org/10.1038/s41419-020-02856-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32801300"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32801300"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "G Zhang, Z Chen, Y Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inhibition of miR-103a-3p suppresses the proliferation in oral squamous cell carcinoma cells via targeting RCAN1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neoplasma (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4149/neo_2020_190430N382"}], "href": "https://doi.org/10.4149/neo_2020_190430N382"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32122140"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32122140"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Shenglan Fan, Liping Wang "}, {"type": "b", "children": [{"type": "t", "text": "N"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "6"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "-Methyladenosine-regulated LINC00675 suppress the proliferation, migration and invasion of breast cancer cells via inhibiting miR-513b-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.2001905"}], "href": "https://doi.org/10.1080/21655979.2021.2001905"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34738869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34738869"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Hao Hua, Jie Wang, Pingyong Zhong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The clinical prognostic value of lncRNA LINC00675 in cancer patients: A meta-analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Medicine (Baltimore) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/MD.0000000000025244"}], "href": "https://doi.org/10.1097/MD.0000000000025244"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33879657"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33879657"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Huimin Liu, Xiaoyu Gu, Guihua Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Copy number variations primed lncRNAs deregulation contribute to poor prognosis in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.102168"}], "href": "https://doi.org/10.18632/aging.102168"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31442207"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31442207"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Shuyun Ma, Xiaohong Deng, Yang Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The lncRNA LINC00675 regulates cell proliferation, migration, and invasion by affecting Wnt/β-catenin signaling in cervical cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2018.10.011"}], "href": "https://doi.org/10.1016/j.biopha.2018.10.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30372871"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30372871"}]}]}]}
Synonyms TMEM238L
NCBI Gene ID 100289255
API
Download Associations
Predicted Functions View LINC00675's ARCHS4 Predicted Functions.
Co-expressed Genes View LINC00675's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View LINC00675's ARCHS4 Predicted Functions.

Functional Associations

LINC00675 has 397 functional associations with biological entities spanning 6 categories (organism, disease, phenotype or trait, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for LINC00675 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00675 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of LINC00675 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00675 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
DisGeNET Gene-Disease Associations diseases associated with LINC00675 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with LINC00675 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of LINC00675 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of LINC00675 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GO Biological Process Annotations 2023 biological processes involving LINC00675 gene from the curated GO Biological Process Annotations 2023 dataset.
GO Cellular Component Annotations 2023 cellular components containing LINC00675 protein from the curated GO Cellular Component Annotations 2023 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of LINC00675 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of LINC00675 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of LINC00675 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of LINC00675 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations gene perturbations changing expression of LINC00675 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.