| Name | long intergenic non-protein coding RNA 888 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n LINC00888 is an oncogenic long non‐coding RNA that is aberrantly upregulated in several cancer types, including laryngeal, esophageal, and melanoma, and its high expression is associated with poor prognosis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": " In esophageal cancer, functional studies have shown that LINC00888 accelerates tumor progression by enhancing cell proliferation and migration, an effect mediated at least in part through binding to miR‐34a, which negatively regulates its downstream targets."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In melanoma, elevated levels of LINC00888 correlate with a shorter overall survival, and mechanistic investigations reveal that this lncRNA promotes cell proliferation, invasion, and epithelial–mesenchymal transition via modulation of the miR‐126/CRK signaling axis, thereby fostering tumor development both in vitro and in vivo."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Expression profiling studies in melanoma further support the notion that dysregulated lncRNAs, including potential candidates like LINC00888, contribute significantly to tumorigenesis and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Finally, broader investigations into the relationship between non‐coding RNAs and their host genes in cancer development underscore the importance of delineating the independent roles of molecules such as LINC00888 in oncogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Panpan Cui, Xiuli Dai, Ruiyue Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA LINC00888 upregulation predicts a worse survival of laryngeal cancer patients and accelerates the growth and mobility of laryngeal cancer cells through regulation of miR-378g/TFRC."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biochem Mol Toxicol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jbt.22878"}], "href": "https://doi.org/10.1002/jbt.22878"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34472153"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34472153"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "H-L Zang, Y-H Li, G-M Huang "}, {"type": "b", "children": [{"type": "t", "text": "Long-chain non-coding RNA Linc00888 promotes the proliferation and migration of esophageal cancer cells by downregulating miR-34a expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202011_23594"}], "href": "https://doi.org/10.26355/eurrev_202011_23594"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33215424"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33215424"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Wei Lu, Xiaohua Tao, Yibin Fan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC00888 promoted tumorigenicity of melanoma via miR-126/CRK signaling axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Onco Targets Ther (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2147/OTT.S164711"}], "href": "https://doi.org/10.2147/OTT.S164711"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30104884"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30104884"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Siqi Wang, Wenliang Fan, Bing Wan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of long noncoding RNA and messenger RNA signatures in melanoma tumorigenesis and metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0172498"}], "href": "https://doi.org/10.1371/journal.pone.0172498"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28225791"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28225791"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Marianna Penzo, Rosanna Clima, Davide Trerè, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Separated Siamese Twins: Intronic Small Nucleolar RNAs and Matched Host Genes May be Altered in Conjunction or Separately in Multiple Cancer Types."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cells (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cells9020387"}], "href": "https://doi.org/10.3390/cells9020387"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32046192"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32046192"}]}]}]}
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| NCBI Gene ID | 100505687 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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LINC00888 has 820 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 7 datasets.
Click the + buttons to view associations for LINC00888 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of LINC00888 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00888 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00888 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of LINC00888 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of LINC00888 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of LINC00888 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of LINC00888 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |