| Name | MSANTD3-TMEFF1 readthrough |
| Description | This locus represents naturally occurring read-through transcription from the neighboring MSANTD3 (Myb/SANT-like DNA-binding domain containing 3) and TMEFF1 (transmembrane protein with EGF-like and two follistatin-like domains 1) genes. The read-through transcript encodes a fusion protein that shares sequence identity with the products of each individual gene. [provided by RefSeq, Aug 2013] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nTMEM106B is an integral lysosomal membrane protein that plays a pivotal role in maintaining neuronal homeostasis. It regulates lysosomal enzyme levels, acidification, and proteolytic activity, thereby ensuring proper axonal transport and synaptic integrity. In various neurodegenerative disease models—including frontotemporal lobar degeneration (FTLD) associated with progranulin deficiency, tauopathies, and TDP‐43 proteinopathies—altered TMEM106B dosage (through loss or gain of function) results in impaired lysosomal protein turnover, axonal swellings, and increased pathological protein accumulation that accelerate neuronal loss and behavioral deficits."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in cellular trafficking and degradation, TMEM106B itself undergoes a regulated intramembrane proteolysis process. Lysosomal proteases first generate an N‐terminal fragment that contains the transmembrane and intracellular domains; subsequent cleavage by the GxGD aspartyl proteases SPPL2a and SPPL2b produces a rapidly degraded intracellular domain. This processing may serve to fine tune lysosomal function and downstream signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nTMEM106B also has essential roles in non‐neuronal cells of the central nervous system. In oligodendrocytes, it interacts with lysosomal proteases (for example, cathepsin D) to maintain levels of myelin proteins and sustain proper myelin lipid metabolism. In microglia, deficiency of TMEM106B leads to impaired lysosomal acidification and enzyme activity, which in turn reduces the levels of survival receptors and dampens the inflammatory as well as remyelination responses. These cell type–specific roles underscore TMEM106B’s broader importance in sustaining neural network integrity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "14", "end_ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to neurodegenerative processes, TMEM106B is implicated in non‐neuronal pathologies and adaptive responses. In metastatic lung cancer, ectopic TMEM106B expression drives the synthesis of enlarged, active lysosomal vesicles and promotes calcium‐dependent exocytosis of cathepsins in a TFEB‐dependent manner—processes that facilitate cancer cell invasion and metastasis. Furthermore, elevated TMEM106B levels in the human brain have been observed in Alzheimer’s disease and may be part of a compensatory response to tissue damage, potentially influencing APOE regulation and synaptic remodeling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zoe A Klein, Hideyuki Takahashi, Mengxiao Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of TMEM106B Ameliorates Lysosomal and Frontotemporal Dementia-Related Phenotypes in Progranulin-Deficient Mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neuron (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neuron.2017.06.026"}], "href": "https://doi.org/10.1016/j.neuron.2017.06.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28728022"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28728022"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Alexandra M Nicholson, Xiaolai Zhou, Ralph B Perkerson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of Tmem106b is unable to ameliorate frontotemporal dementia-like phenotypes in an AAV mouse model of C9ORF72-repeat induced toxicity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Neuropathol Commun (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40478-018-0545-x"}], "href": "https://doi.org/10.1186/s40478-018-0545-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29855382"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29855382"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Patrick Lüningschrör, Georg Werner, Stijn Stroobants, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The FTLD Risk Factor TMEM106B Regulates the Transport of Lysosomes at the Axon Initial Segment of Motoneurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2020.02.060"}], "href": "https://doi.org/10.1016/j.celrep.2020.02.060"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32160553"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32160553"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaolai Zhou, Mieu Brooks, Peizhou Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of Tmem106b exacerbates FTLD pathologies and causes motor deficits in progranulin-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.202050197"}], "href": "https://doi.org/10.15252/embr.202050197"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32761777"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32761777"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Tuancheng Feng, Shuyi Mai, Jenn Marie Roscoe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of TMEM106B and PGRN leads to severe lysosomal abnormalities and neurodegeneration in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.202050219"}], "href": "https://doi.org/10.15252/embr.202050219"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32852886"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32852886"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Georg Werner, Markus Damme, Martin Schludi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of TMEM106B potentiates lysosomal and FTLD-like pathology in progranulin-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.202050241"}], "href": "https://doi.org/10.15252/embr.202050241"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32929860"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32929860"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Emma L Clayton, Adrian M Isaacs "}, {"type": "b", "children": [{"type": "t", "text": "Progranulin and TMEM106B: when two become wan."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.202051668"}], "href": "https://doi.org/10.15252/embr.202051668"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32985120"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32985120"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Tuancheng Feng, Lin Luan, Isabel Iscol Katz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TMEM106B deficiency impairs cerebellar myelination and synaptic integrity with Purkinje cell loss."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Neuropathol Commun (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40478-022-01334-7"}], "href": "https://doi.org/10.1186/s40478-022-01334-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35287730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35287730"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Anne-Sophie Cabron, Uwe Borgmeyer, Julia Richter, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lack of a protective effect of the Tmem106b \"protective SNP\" in the Grn knockout mouse model for frontotemporal lobar degeneration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Neuropathol Commun (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40478-023-01510-3"}], "href": "https://doi.org/10.1186/s40478-023-01510-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36707901"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36707901"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "George A Edwards, Caleb A Wood, Yang He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TMEM106B coding variant is protective and deletion detrimental in a mouse model of tauopathy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Neuropathol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00401-024-02701-5"}], "href": "https://doi.org/10.1007/s00401-024-02701-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38526616"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38526616"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Tuancheng Feng, Huan Du, Cha Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of TMEM106B exacerbates Tau pathology and neurodegeneration in PS19 mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Neuropathol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00401-024-02702-4"}], "href": "https://doi.org/10.1007/s00401-024-02702-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38526799"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38526799"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Owen A Brady, Xiaolai Zhou, Fenghua Hu "}, {"type": "b", "children": [{"type": "t", "text": "Regulated intramembrane proteolysis of the frontotemporal lobar degeneration risk factor, TMEM106B, by signal peptide peptidase-like 2a (SPPL2a)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.515700"}], "href": "https://doi.org/10.1074/jbc.M113.515700"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24872421"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24872421"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Emma L Clayton, Carmelo Milioto, Bhavana Muralidharan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Frontotemporal dementia causative CHMP2B impairs neuronal endolysosomal traffic-rescue by TMEM106B knockdown."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/brain/awy284"}], "href": "https://doi.org/10.1093/brain/awy284"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30496365"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30496365"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Tuancheng Feng, Rory R Sheng, Santiago Solé-Domènech, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A role of the frontotemporal lobar degeneration risk factor TMEM106B in myelination."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/brain/awaa154"}], "href": "https://doi.org/10.1093/brain/awaa154"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32572497"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32572497"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Stijn Stroobants, Rudi D'Hooge, Markus Damme "}, {"type": "b", "children": [{"type": "t", "text": "Aged Tmem106b knockout mice display gait deficits in coincidence with Purkinje cell loss and only limited signs of non-motor dysfunction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Pathol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/bpa.12903"}], "href": "https://doi.org/10.1111/bpa.12903"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33016371"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33016371"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Tingting Zhang, Weilun Pang, Tuancheng Feng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TMEM106B regulates microglial proliferation and survival in response to demyelination."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Adv (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/sciadv.add2676"}], "href": "https://doi.org/10.1126/sciadv.add2676"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37146150"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37146150"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Hideyuki Takahashi, Azucena Perez-Canamas, Chris W Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lysosomal TMEM106B interacts with galactosylceramidase to regulate myelin lipid metabolism."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Commun Biol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s42003-024-06810-5"}], "href": "https://doi.org/10.1038/s42003-024-06810-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "39237682"}], "href": "https://pubmed.ncbi.nlm.nih.gov/39237682"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Samrat T Kundu, Caitlin L Grzeskowiak, Jared J Fradette, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TMEM106B drives lung cancer metastasis by inducing TFEB-dependent lysosome synthesis and secretion of cathepsins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-018-05013-x"}], "href": "https://doi.org/10.1038/s41467-018-05013-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30013069"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30013069"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Cynthia Picard, Justin Miron, Judes Poirier "}, {"type": "b", "children": [{"type": "t", "text": "Association of TMEM106B with Cortical "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "APOE"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " Gene Expression in Neurodegenerative Conditions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes (Basel) (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/genes15040416"}], "href": "https://doi.org/10.3390/genes15040416"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38674351"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38674351"}]}]}]}
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| Synonyms | TMEFF1, C9ORF30-TMEFF1, C9ORF3-TMEFF1 |
| NCBI Gene ID | 100526694 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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MSANTD3-TMEFF1 has 1,339 functional associations with biological entities spanning 8 categories (molecular profile, chemical, functional term, phrase or reference, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 42 datasets.
Click the + buttons to view associations for MSANTD3-TMEFF1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of MSANTD3-TMEFF1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of MSANTD3-TMEFF1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of MSANTD3-TMEFF1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MSANTD3-TMEFF1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of MSANTD3-TMEFF1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing MSANTD3-TMEFF1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with MSANTD3-TMEFF1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of MSANTD3-TMEFF1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with MSANTD3-TMEFF1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with MSANTD3-TMEFF1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MSANTD3-TMEFF1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of MSANTD3-TMEFF1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of MSANTD3-TMEFF1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving MSANTD3-TMEFF1 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of MSANTD3-TMEFF1 gene from the GTEx eQTL 2025 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with MSANTD3-TMEFF1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with MSANTD3-TMEFF1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of MSANTD3-TMEFF1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for MSANTD3-TMEFF1 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of MSANTD3-TMEFF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of MSANTD3-TMEFF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of MSANTD3-TMEFF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of MSANTD3-TMEFF1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of MSANTD3-TMEFF1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with MSANTD3-TMEFF1 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain MSANTD3-TMEFF1 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of MSANTD3-TMEFF1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of MSANTD3-TMEFF1 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of MSANTD3-TMEFF1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of MSANTD3-TMEFF1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of MSANTD3-TMEFF1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of MSANTD3-TMEFF1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at MSANTD3-TMEFF1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of MSANTD3-TMEFF1 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of MSANTD3-TMEFF1 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of MSANTD3-TMEFF1 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of MSANTD3-TMEFF1 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of MSANTD3-TMEFF1 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of MSANTD3-TMEFF1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of MSANTD3-TMEFF1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of MSANTD3-TMEFF1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with MSANTD3-TMEFF1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |