PLPP2 Gene

Name phospholipid phosphatase 2
Description The protein encoded by this gene is a member of the phosphatidic acid phosphatase (PAP) family. PAPs convert phosphatidic acid to diacylglycerol, and function in de novo synthesis of glycerolipids as well as in receptor-activated signal transduction mediated by phospholipase D. This protein is similar to phosphatidic acid phosphatase type 2A (PPAP2A) and type 2B (PPAP2B). All three proteins contain 6 transmembrane regions, and a consensus N-glycosylation site. This protein has been shown to possess membrane associated PAP activity. Three alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]
Summary
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Specifically, knock-down of PLPP2 delays cyclin A accumulation and S-phase entry, while its overexpression accelerates these events, indicating that PLPP2 plays a regulatory role in G1/S transition. Additionally, studies have demonstrated that lipid phosphate phosphatases, including PLPP2, can form functional homo- and hetero-oligomers, potentially conferring spatial regulation of phosphatidic acid and sphingosine 1-phosphate signaling pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the context of cancer biology, PLPP2 has emerged as a pro-tumorigenic factor. Elevated PLPP2 expression is associated with increased cell proliferation and tumor growth in breast cancer, where it appears to influence the expression of key regulators such as cyclins, cell cycle inhibitors, and even c-Myc. Knockout studies in breast cancer cell lines have shown that loss of PLPP2 compromises G1/S progression and tumor formation, while overexpression correlates with poorer patient outcomes, particularly in estrogen receptor-positive breast cancers. These findings highlight PLPP2 as a potential therapeutic target in malignancies."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nWhile efforts in other fields, such as the enhanced detection of early-stage lung adenocarcinoma via image-based screening, underline the broader challenge of accurately defining tumor markers and reducing over-treatment, these advances also accentuate the importance of identifying precise molecular determinants. Although this study did not directly address PLPP2, the development of such diagnostic tools reinforces the need for further investigation into molecules like PLPP2 that are pivotal in tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "N Zhang, J P Sundberg, T Gridley "}, {"type": "b", "children": [{"type": "t", "text": "Mice mutant for Ppap2c, a homolog of the germ cell migration regulator wunen, are viable and fertile."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genesis (2000)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1526-968x(200008)27:4"}, {"type": "a", "children": [{"type": "t", "text": "137::aid-gene10"}], "href": "137::aid-gene10"}, {"type": "t", "text": "3.0.co;2-4"}], "href": "https://doi.org/10.1002/1526-968x(200008"}, {"type": "t", "text": "27:4"}, {"type": "a", "children": [{"type": "t", "text": "137::aid-gene10"}], "href": "137::aid-gene10"}, {"type": "t", "text": "3.0.co;2-4) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "10992322"}], "href": "https://pubmed.ncbi.nlm.nih.gov/10992322"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Katherine E Morris, Luis M Schang, David N Brindley "}, {"type": "b", "children": [{"type": "t", "text": "Lipid phosphate phosphatase-2 activity regulates S-phase entry of the cell cycle in Rat2 fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M511710200"}], "href": "https://doi.org/10.1074/jbc.M511710200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16467304"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16467304"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jaclyn S Long, Nigel J Pyne, Susan Pyne "}, {"type": "b", "children": [{"type": "t", "text": "Lipid phosphate phosphatases form homo- and hetero-oligomers: catalytic competency, subcellular distribution and function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BJ20071607"}], "href": "https://doi.org/10.1042/BJ20071607"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18215144"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18215144"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xiaoyun Tang, Christopher R Cromwell, Rongzong Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lipid phosphate phosphatase-2 promotes tumor growth through increased c-Myc expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Theranostics (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/thno.66230"}], "href": "https://doi.org/10.7150/thno.66230"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35966578"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35966578"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Zhenming Wang, Huimin Qi, Yuping Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PLPP2: Potential therapeutic target of breast cancer in PLPP family."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunobiology (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.imbio.2022.152298"}], "href": "https://doi.org/10.1016/j.imbio.2022.152298"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36332491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36332491"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yibei Wang, Ziwei Miao, Xiaoxue Qin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transcriptomic landscape based on annotated clinical features reveals PLPP2 involvement in lipid raft-mediated proliferation signature of early-stage lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Clin Cancer Res (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13046-023-02877-w"}], "href": "https://doi.org/10.1186/s13046-023-02877-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37996944"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37996944"}]}]}]}
NCBI Gene ID 8612
API
Download Associations
Predicted Functions View PLPP2's ARCHS4 Predicted Functions.
Co-expressed Genes View PLPP2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PLPP2's ARCHS4 Predicted Functions.

Functional Associations

PLPP2 has 3,255 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 44 datasets.

Click the + buttons to view associations for PLPP2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PLPP2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of PLPP2 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Proteomics Cell lines associated with PLPP2 protein from the CCLE Cell Line Proteomics dataset.
CellMarker Gene-Cell Type Associations cell types associated with PLPP2 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of PLPP2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of PLPP2 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PLPP2 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing PLPP2 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PLPP2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DeepCoverMOA Drug Mechanisms of Action small molecule perturbations with high or low expression of PLPP2 protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by PLPP2 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PLPP2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GlyGen Glycosylated Proteins ligands (chemical) binding PLPP2 protein from the GlyGen Glycosylated Proteins dataset.
GO Biological Process Annotations 2023 biological processes involving PLPP2 gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving PLPP2 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2023 cellular components containing PLPP2 protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing PLPP2 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by PLPP2 gene from the curated GO Molecular Function Annotations 2023 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PLPP2 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of PLPP2 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PLPP2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with PLPP2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PLPP2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of PLPP2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
KEGG Pathways 2026 pathways involving PLPP2 protein from the KEGG Pathways 2026 dataset.
Kinase Library Tyrosine Kinome Atlas kinases that phosphorylate PLPP2 protein from the Kinase Library Tyrosine Kinome Atlas dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of PLPP2 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of PLPP2 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by PLPP2 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of PLPP2 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
MW Enzyme Metabolite Associations interacting metabolites for PLPP2 protein from the MW Gene Metabolite Associations dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of PLPP2 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
PFOCR Pathway Figure Associations 2023 pathways involving PLPP2 protein from the PFOCR Pathway Figure Associations 2023 dataset.
PFOCR Pathway Figure Associations 2024 pathways involving PLPP2 protein from the Wikipathways PFOCR 2024 dataset.
Reactome Pathways 2024 pathways involving PLPP2 protein from the Reactome Pathways 2024 dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of PLPP2 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of PLPP2 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PLPP2 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PLPP2 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of PLPP2 gene from the Sci-Plex Drug Perturbation Signatures dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PLPP2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PLPP2 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with PLPP2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.
WikiPathways Pathways 2024 pathways involving PLPP2 protein from the WikiPathways Pathways 2024 dataset.