PLPPR1 Gene

Name phospholipid phosphatase related 1
Description This gene encodes a member of the plasticity-related gene (PRG) family. Members of the PRG family mediate lipid phosphate phosphatase activity in neurons and are known to be involved in neuronal plasticity. The protein encoded by this gene does not perform its function through enzymatic phospholipid degradation. This gene is strongly expressed in brain. It shows dynamic expression regulation during brain development and neuronal excitation. Alternatively spliced transcript variants encoding the same protein have been observed. [provided by RefSeq, Jul 2008]
Summary
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These studies document how allele‐specific DNA methylation at regions like the intergenic differentially methylated region (IG‐DMR) and secondary DMRs, together with histone modifications, coordinate the precise expression of protein‐coding and noncoding genes during development and in disease states (see."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther studies have characterized the functional roles of MEG3 and related noncoding RNAs in various pathological processes such as ischemic injury, hepatic metabolism, cardiac hypertrophy, diabetic complications, and even neuroinflammation. These investigations illustrate that MEG3 can operate as a competing endogenous RNA, influence apoptosis and autophagy, modulate transcription factor activity, and even affect mitochondrial dynamics—all of which have significant consequences for tissue homeostasis and disease progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "18"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, despite the comprehensive coverage of imprinting, lncRNA‐mediated gene regulation, and cellular stress responses in these publications, none of the abstracts provide any mention or characterization of PLPPR1. In other words, although the works collectively offer valuable insights into epigenetic regulation and noncoding RNA function across various tissues and disease models, they do not address—or even reference—the function or role of PLPPR1."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "19", "end_ref": "31"}, {"type": "fg_f", "ref": "23"}]}, {"type": "t", "text": " Therefore, based on this collection of literature, no function of PLPPR1 can be summarized or inferred."}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "S Takada, M Tevendale, J Baker, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Increased long noncoding RNA maternally expressed gene 3 contributes to podocyte injury induced by high glucose through regulation of mitochondrial fission."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-020-03022-7"}], "href": "https://doi.org/10.1038/s41419-020-03022-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32994406"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32994406"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Xiao Cheng, Mohamed Sham Shihabudeen Haider Ali, Matthew Moran, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA Meg3 deficiency impairs glucose homeostasis and insulin signaling by inducing cellular senescence of hepatic endothelium in obesity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Redox Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.redox.2021.101863"}], "href": "https://doi.org/10.1016/j.redox.2021.101863"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33508742"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33508742"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Dajun Liu, Ying Liu, Xiaotong Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "c-MYC-induced long noncoding RNA MEG3 aggravates kidney ischemia-reperfusion injury through activating mitophagy by upregulation of RTKN to trigger the Wnt/β-catenin pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-021-03466-5"}], "href": "https://doi.org/10.1038/s41419-021-03466-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33602903"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33602903"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Qi-Rong Xu, Jian Tang, Hong-Ying Liao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA MEG3 mediates the miR-149-3p/FOXP3 axis by reducing p53 ubiquitination to exert a suppressive effect on regulatory T cell differentiation and immune escape in esophageal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Transl Med (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12967-021-02907-1"}], "href": "https://doi.org/10.1186/s12967-021-02907-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34140005"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34140005"}]}]}]}
NCBI Gene ID 54886
API
Download Associations
Predicted Functions View PLPPR1's ARCHS4 Predicted Functions.
Co-expressed Genes View PLPPR1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PLPPR1's ARCHS4 Predicted Functions.

Functional Associations

PLPPR1 has 1,003 functional associations with biological entities spanning 5 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 24 datasets.

Click the + buttons to view associations for PLPPR1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PLPPR1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of PLPPR1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CellMarker Gene-Cell Type Associations cell types associated with PLPPR1 gene from the CellMarker Gene-Cell Type Associations dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PLPPR1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PLPPR1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PLPPR1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving PLPPR1 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing PLPPR1 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PLPPR1 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PLPPR1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of PLPPR1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with PLPPR1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PLPPR1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of PLPPR1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of PLPPR1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of PLPPR1 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
PFOCR Pathway Figure Associations 2024 pathways involving PLPPR1 protein from the Wikipathways PFOCR 2024 dataset.
Reactome Pathways 2024 pathways involving PLPPR1 protein from the Reactome Pathways 2024 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PLPPR1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PLPPR1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of PLPPR1 gene from the Sci-Plex Drug Perturbation Signatures dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PLPPR1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PLPPR1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with PLPPR1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.