PPIAL4F Gene

Name peptidylprolyl isomerase A (cyclophilin A)-like 4F
Description Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nKelch‐like protein 3 (KLHL3) functions as a key adaptor protein in an E3 ubiquitin ligase complex that targets with‐no‐lysine kinases (WNK1, WNK4) and other substrates for ubiquitin‐mediated degradation. This regulation is essential for proper salt and potassium homeostasis in the kidney, where the degradation of these kinases prevents overactivation of the downstream OSR1/SPAK–NaCl cotransporter (NCC) cascade. When KLHL3 function is impaired, as in various genetic mutations, increased levels of WNK kinases lead to enhanced NCC phosphorylation, ultimately manifesting as pseudohypoaldosteronism type II (PHAII) characterized by salt‐sensitive hypertension, hyperkalemia, and metabolic acidosis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to controlling WNK kinase abundance, KLHL3 is intricately involved in fine‐tuning renal electrolyte transport through multiple mechanisms. Specific mutations in KLHL3 (in domains such as the Kelch repeat or BTB domains) not only disrupt the binding to either WNK kinases or its E3 scaffold partner Cullin3 but can also lead to a dominant negative effect through aberrant dimerization. Moreover, KLHL3 directly binds alternative substrates such as claudin‑8 in the collecting duct to modulate paracellular chloride permeability. The regulatory network is further modulated by dietary signals; for example, low‐potassium intake induces protein kinase C–mediated phosphorylation of KLHL3 that impairs substrate binding, leading to increased WNK4 accumulation and NCC activation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther studies have highlighted additional complexities in KLHL3 biology. For instance, the ubiquitin ligase complex differentially affects full‐length versus kidney‐specific isoforms of WNK1, and mutations preferentially impairing degradation of the KS‐WNK1 isoform evoke milder clinical phenotypes. Beyond its classical role in the distal nephron, KLHL3 dysfunction has been linked to extrarenal effects such as altered energy expenditure in the liver, which may mitigate obesity and insulin resistance. Animal models mimicking various KLHL3 mutations recapitulate the key features of familial hyperkalemic hypertension and underline the indispensability of proper KLHL3–Cullin3 interaction for maintaining electrolyte balance and blood pressure."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "9", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Koichiro Susa, Eisei Sohara, Tatemitsu Rai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired degradation of WNK1 and WNK4 kinases causes PHAII in mutant KLHL3 knock-in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddu217"}], "href": "https://doi.org/10.1093/hmg/ddu217"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24821705"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24821705"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yongfeng Gong, Jinzhi Wang, Jing Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "KLHL3 regulates paracellular chloride transport in the kidney by ubiquitination of claudin-8."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1421441112"}], "href": "https://doi.org/10.1073/pnas.1421441112"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25831548"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25831548"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Kenichi Ishizawa, Ning Xu, Johannes Loffing, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Potassium depletion stimulates Na-Cl cotransporter "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "via"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " phosphorylation and inactivation of the ubiquitin ligase Kelch-like 3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2016.10.127"}], "href": "https://doi.org/10.1016/j.bbrc.2016.10.127"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27942049"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27942049"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Emi Sasaki, Koichiro Susa, Takayasu Mori, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "WNK4 is indispensable for the pathogenesis of pseudohypoaldosteronism type II caused by mutant KLHL3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2017.07.121"}], "href": "https://doi.org/10.1016/j.bbrc.2017.07.121"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28743496"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28743496"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Sayaka Yoshida, Yuya Araki, Takayasu Mori, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Decreased KLHL3 expression is involved in the pathogenesis of pseudohypoaldosteronism type II caused by cullin 3 mutation in vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Exp Nephrol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10157-018-1593-z"}], "href": "https://doi.org/10.1007/s10157-018-1593-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29869755"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29869755"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ryan J Cornelius, Chong Zhang, Kayla J Erspamer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dual gain and loss of cullin 3 function mediates familial hyperkalemic hypertension."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.00602.2017"}], "href": "https://doi.org/10.1152/ajprenal.00602.2017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29897280"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29897280"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Chien-Ming Lin, Chih-Jen Cheng, Sung-Sen Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Generation and analysis of a mouse model of pseudohypoaldosteronism type II caused by KLHL3 mutation in BTB domain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.201801023R"}], "href": "https://doi.org/10.1096/fj.201801023R"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30148674"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30148674"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Qin Guo, Ya Zhang, Geng-Ru Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Decreased KLHL3 expression is involved in the activation of WNK-OSR1/SPAK-NCC cascade in type 1 diabetic mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pflugers Arch (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00424-020-02509-8"}], "href": "https://doi.org/10.1007/s00424-020-02509-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33432425"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33432425"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Mauricio Ostrosky-Frid, María Chávez-Canales, Jinwei Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of KLHL3 and dietary K"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": " in regulating KS-WNK1 expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.00575.2020"}], "href": "https://doi.org/10.1152/ajprenal.00575.2020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33682442"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33682442"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Yujiro Maeoka, Mohammed Z Ferdaus, Ryan J Cornelius, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Generation and analysis of pseudohypoaldosteronism type II knock-in mice caused by a nonsense KLHL3 mutation in the Kelch domain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.202101827RR"}], "href": "https://doi.org/10.1096/fj.202101827RR"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35621709"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35621709"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Ju-Hong Jang, Jeong Woong Lee, Min Ji Cho, et al. "}, {"type": "b", "children": [{"type": "t", "text": "KLHL3 deficiency in mice ameliorates obesity, insulin resistance, and nonalcoholic fatty liver disease by regulating energy expenditure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Mol Med (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s12276-022-00833-w"}], "href": "https://doi.org/10.1038/s12276-022-00833-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36028759"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36028759"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Siqi Ying, Qin Guo, Chong Zhang "}, {"type": "b", "children": [{"type": "t", "text": "KLHL3-dependent WNK4 degradation affected by potassium through the neddylation and autophagy pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Nephrol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12882-023-03257-4"}], "href": "https://doi.org/10.1186/s12882-023-03257-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37481568"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37481568"}]}]}]}
NCBI Gene ID 728945
API
Download Associations
Predicted Functions View PPIAL4F's ARCHS4 Predicted Functions.
Co-expressed Genes View PPIAL4F's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PPIAL4F's ARCHS4 Predicted Functions.

Functional Associations

PPIAL4F has 230 functional associations with biological entities spanning 5 categories (molecular profile, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for PPIAL4F from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of PPIAL4F gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of PPIAL4F gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of PPIAL4F gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of PPIAL4F gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PPIAL4F gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of PPIAL4F gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of PPIAL4F gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GO Biological Process Annotations 2023 biological processes involving PPIAL4F gene from the curated GO Biological Process Annotations 2023 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by PPIAL4F gene from the curated GO Molecular Function Annotations 2023 dataset.
HPM Cell Type and Tissue Protein Expression Profiles cell types and tissues with high or low expression of PPIAL4F protein relative to other cell types and tissues from the HPM Cell Type and Tissue Protein Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of PPIAL4F gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PPIAL4F gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of PPIAL4F gene from the Rummagene Transcription Factor Associations 2026 dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of PPIAL4F gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.