| Name | proline rich 23C |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA review of the provided studies reveals that several critical molecular pathways are implicated in tissue repair, proteolysis, and oxidative stress management. For instance, one group of investigations demonstrates that signaling via the p75 neurotrophin receptor modulates extracellular proteolytic activity—through down‐regulation of tissue plasminogen activator and enhanced plasminogen activator inhibitor‐1 expression—which in turn influences fibrin clearance and scar formation after injury."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": " Similarly, studies on alcoholic liver disease have highlighted the role of proteolytic regulators in extracellular matrix remodeling"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", underscoring the importance of controlled fibrinolysis in pathological settings.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA second body of work focuses on vitamin E biology—particularly its transport, tissue delivery and antioxidant function—mediated by the alpha‐tocopherol transfer protein (TTP). These studies document that TTP is vital for maintaining appropriate alpha‐tocopherol concentrations in plasma and various tissues such as the brain, liver, and reproductive organs; its activity impacts processes ranging from neuroprotection against oxidative stress and amyloid beta clearance to restoration of fertility in deficiency states."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "14"}]}, {"type": "t", "text": " Additionally, complementary investigations have characterized the interplay between vitamin E transporters and other antioxidant systems in the brain and lungs, providing an anatomical and molecular basis for resistance to oxidative stress and age‐related neurodegeneration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nDespite the extensive dissection of these fundamental processes—ranging from the regulation of extracellular matrix remodeling to the homeostatic control of antioxidant distribution—none of the abstracts provide direct evidence or discussion regarding the function of PRR23C. As such, while the studies collectively enhance our understanding of tissue repair, proteolysis, and antioxidant defense through receptors like p75(NTR) and transporters such as TTP, the specific role and molecular function of PRR23C remain undefined based on the literature surveyed."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "5"}, {"type": "fg_f", "ref": "15"}, {"type": "fg_f", "ref": "4"}, {"type": "fg_f", "ref": "6"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_fs", "start_ref": "7", "end_ref": "11"}, {"type": "fg_f", "ref": "13"}, {"type": "fg_f", "ref": "12"}, {"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Benjamin D Sachs, George S Baillie, Julianne R McCall, et al. "}, {"type": "b", "children": [{"type": "t", "text": "p75 neurotrophin receptor regulates tissue fibrosis through inhibition of plasminogen activation via a PDE4/cAMP/PKA pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200701040"}], "href": "https://doi.org/10.1083/jcb.200701040"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17576803"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17576803"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Bing-Qiao Zhao, Yasuhiko Ikeda, Hayato Ihara, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Essential role of endogenous tissue plasminogen activator through matrix metalloproteinase 9 induction and expression on heparin-produced cerebral hemorrhage after cerebral ischemia in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2003-03-0835"}], "href": "https://doi.org/10.1182/blood-2003-03-0835"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14630814"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14630814"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Devanshi Seth, Philip J Hogg, Mark D Gorrell, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Direct effects of alcohol on hepatic fibrinolytic balance: implications for alcoholic liver disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hepatol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jhep.2007.12.015"}], "href": "https://doi.org/10.1016/j.jhep.2007.12.015"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18289715"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18289715"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "D E Kaempf-Rotzoll, K Igarashi, J Aoki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Alpha-tocopherol transfer protein is specifically localized at the implantation site of pregnant mouse uterus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Reprod (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1095/biolreprod67.2.599"}], "href": "https://doi.org/10.1095/biolreprod67.2.599"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12135902"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12135902"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Savita Khanna, Viren Patel, Cameron Rink, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Delivery of orally supplemented alpha-tocotrienol to vital organs of rats and tocopherol-transport protein deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Free Radic Biol Med (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.freeradbiomed.2005.06.013"}], "href": "https://doi.org/10.1016/j.freeradbiomed.2005.06.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16257640"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16257640"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Sarah L Cuddihy, Sameh S Ali, Erik S Musiek, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Prolonged alpha-tocopherol deficiency decreases oxidative stress and unmasks alpha-tocopherol-dependent regulation of mitochondrial function in the brain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M702572200"}], "href": "https://doi.org/10.1074/jbc.M702572200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18180306"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18180306"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Kishorchandra Gohil, Saji Oommen, Hung T Quach, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mice lacking alpha-tocopherol transfer protein gene have severe alpha-tocopherol deficiency in multiple regions of the central nervous system."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2008.01.044"}], "href": "https://doi.org/10.1016/j.brainres.2008.01.044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18299118"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18299118"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Deborah L Bella, Bettina C Schock, Yunsook Lim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of the alpha-tocopherol transfer protein in mice: lack of response to dietary vitamin E or oxidative stress."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Lipids (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11745-006-5077-7"}], "href": "https://doi.org/10.1007/s11745-006-5077-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17707975"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17707975"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Yoichiro Nishida, Shingo Ito, Sumio Ohtsuki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Depletion of vitamin E increases amyloid beta accumulation by decreasing its clearances from brain and blood in a mouse model of Alzheimer disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.054056"}], "href": "https://doi.org/10.1074/jbc.M109.054056"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19679659"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19679659"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Mototada Shichiri, Nozomu Kono, Yuta Shimanaka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel role for α-tocopherol transfer protein (α-TTP) in protecting against chloroquine toxicity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.321281"}], "href": "https://doi.org/10.1074/jbc.M111.321281"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22147702"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22147702"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "P Marcos, J González-Fuentes, L Castro-Vázquez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Vitamin transporters in mice brain with aging."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Anat (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/joa.12769"}], "href": "https://doi.org/10.1111/joa.12769"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29315537"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29315537"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "L Ulatowski, Mikel Ghelfi, Ryan West, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The tocopherol transfer protein mediates vitamin E trafficking between cerebellar astrocytes and neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jbc.2022.101712"}], "href": "https://doi.org/10.1016/j.jbc.2022.101712"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35150738"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35150738"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Andrea Irías-Mata, Nadine Sus, Maria-Lena Hug, et al. "}, {"type": "b", "children": [{"type": "t", "text": "α-Tocomonoenol Is Bioavailable in Mice and May Partly Be Regulated by the Function of the Hepatic α‑Tocopherol Transfer Protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Molecules (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/molecules25204803"}], "href": "https://doi.org/10.3390/molecules25204803"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33086686"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33086686"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "J Selva-Clemente, P Marcos, J González-Fuentes, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Interneurons in the CA1 stratum oriens expressing αTTP may play a role in the delayed-ageing Pol μ mouse model."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Neurosci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mcn.2024.103960"}], "href": "https://doi.org/10.1016/j.mcn.2024.103960"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "39179163"}], "href": "https://pubmed.ncbi.nlm.nih.gov/39179163"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "K Gohil, S Oommen, V T Vasu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tocopherol transfer protein deficiency modifies nuclear receptor transcriptional networks in lungs: modulation by cigarette smoke in vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Aspects Med (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mam.2007.02.004"}], "href": "https://doi.org/10.1016/j.mam.2007.02.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17400288"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17400288"}]}]}]}
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| Proteins | PR23C_HUMAN |
| NCBI Gene ID | 389152 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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PRR23C has 893 functional associations with biological entities spanning 8 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 36 datasets.
Click the + buttons to view associations for PRR23C from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of PRR23C gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of PRR23C gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR23C gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of PRR23C gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with PRR23C protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR23C gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with PRR23C gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by PRR23C gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with PRR23C gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with PRR23C gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at PRR23C gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of PRR23C gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of PRR23C gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of PRR23C gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of PRR23C gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of PRR23C gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of PRR23C gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of PRR23C gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with PRR23C gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of PRR23C protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for PRR23C protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of PRR23C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of PRR23C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR23C gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of PRR23C gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain PRR23C protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of PRR23C gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at PRR23C gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of PRR23C gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of PRR23C gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of PRR23C gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of PRR23C gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of PRR23C gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of PRR23C gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of PRR23C protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with PRR23C protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |