| Name | proline rich 23 domain containing 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA set of studies has established that a key nucleolar protein—dyskerin, encoded by DKC1—is indispensable for post‐transcriptional RNA modification and telomere maintenance. Dyskerin acts as a pseudouridine synthase that converts specific uridine residues in ribosomal RNA into pseudouridine, an essential modification for correct rRNA folding and ribosome function. In addition to its role in rRNA modification, dyskerin is an integral component of the telomerase complex and is vital for the stabilization of the telomerase RNA moiety. Mutations in DKC1 impair both rRNA pseudouridylation and telomerase activity, leading to defects in ribosome biogenesis, aberrant translation—including impaired internal ribosome entry site (IRES)–dependent translation—and consequent activation of DNA damage responses, all of which contribute to the pathogenesis of dyskeratosis congenita and related proliferative disorders."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther investigations have underscored that the coordinated expression of HoxD cluster genes is critical for establishing the anterior–posterior limb prepattern and ensuring correct digit formation. Through a combination of targeted gene disruption and genomic rearrangements, researchers have demonstrated that perturbations in the early collinear expression of Hoxd genes lead to limb malformations—ranging from digit truncations to the emergence of extra skeletal elements—thereby highlighting a tightly regulated genetic milieu that sculpts limb morphology during vertebrate development."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, complementary studies have explored the regulation of cellular signaling and mitochondrial function. Investigations into myo‐inositol transporters have revealed that distinct transporter isoforms play specialized roles in maintaining phosphoinositide signaling, which is critical for neuronal and glial cell function. In parallel, analyses of mitochondrial translocase subunits, such as TOMM7, have shown that proper mitochondrial protein import is essential for energy homeostasis and cerebrovascular development; defects in these components can lead to a bioenergetic uncoupling that underpins mitochondrial disease phenotypes. Notably, despite significant advances in elucidating these and other cellular pathways—from RNA modification and telomere function to limb patterning and mitochondrial regulation—none of the presented studies provide insight into a functional role for PRR23D1. The absence of evidence linking PRR23D1 to any of these processes highlights a gap in current knowledge, underscoring the need for further research to determine its biological activity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "17", "end_ref": "21"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jun He, Sandra Navarrete, Murek Jasinski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Targeted disruption of Dkc1, the gene mutated in X-linked dyskeratosis congenita, causes embryonic lethality in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.onc.1205969"}], "href": "https://doi.org/10.1038/sj.onc.1205969"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12400016"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12400016"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Davide Ruggero, Silvia Grisendi, Francesco Piazza, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dyskeratosis congenita and cancer in mice deficient in ribosomal RNA modification."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.1079447"}], "href": "https://doi.org/10.1126/science.1079447"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12522253"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12522253"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yuko Mochizuki, Jun He, Shashikant Kulkarni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mouse dyskerin mutations affect accumulation of telomerase RNA and small nucleolar RNA, telomerase activity, and ribosomal RNA processing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0402560101"}], "href": "https://doi.org/10.1073/pnas.0402560101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15240872"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15240872"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Andrew Yoon, Guang Peng, Yves Brandenburger, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.1123835"}], "href": "https://doi.org/10.1126/science.1123835"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16690864"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16690864"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Bai-Wei Gu, Monica Bessler, Philip J Mason "}, {"type": "b", "children": [{"type": "t", "text": "A pathogenic dyskerin mutation impairs proliferation and activates a DNA damage response independent of telomere length in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0803559105"}], "href": "https://doi.org/10.1073/pnas.0803559105"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18626023"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18626023"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Jingping Ge, David A Rudnick, Jun He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dyskerin ablation in mouse liver inhibits rRNA processing and cell division."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.01128-09"}], "href": "https://doi.org/10.1128/MCB.01128-09"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19917719"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19917719"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jingping Ge, Seth D Crosby, Michael E Heinz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SnoRNA microarray analysis reveals changes in H/ACA and C/D RNA levels caused by dyskerin ablation in mouse liver."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BJ20091898"}], "href": "https://doi.org/10.1042/BJ20091898"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20423331"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20423331"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Rosario Machado-Pinilla, Jaime Carrillo, Cristina Manguan-Garcia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Defects in mTR stability and telomerase activity produced by the Dkc1 A353V mutation in dyskeratosis congenita are rescued by a peptide from the dyskerin TruB domain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Transl Oncol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12094-012-0865-4"}], "href": "https://doi.org/10.1007/s12094-012-0865-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22855157"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22855157"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Bai-Wei Gu, Jingping Ge, Jian-Meng Fan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Slow growth and unstable ribosomal RNA lacking pseudouridine in mouse embryonic fibroblast cells expressing catalytically inactive dyskerin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS Lett (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.febslet.2013.05.028"}], "href": "https://doi.org/10.1016/j.febslet.2013.05.028"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23726835"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23726835"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Xiao-Hui Wang, Shu-Feng Zhang, Hai-Ying Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miRNA326-5p Targets DKC1 Gene to Regulate Apoptosis-Related Proteins and Intervene in the Development of Neuroblastoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Anal Cell Pathol (Amst) (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2023/6761894"}], "href": "https://doi.org/10.1155/2023/6761894"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37426487"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37426487"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "A P Davis, M R Capecchi "}, {"type": "b", "children": [{"type": "t", "text": "A mutational analysis of the 5' HoxD genes: dissection of genetic interactions during limb development in the mouse."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (1996)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.122.4.1175"}], "href": "https://doi.org/10.1242/dev.122.4.1175"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "8620844"}], "href": "https://pubmed.ncbi.nlm.nih.gov/8620844"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Marie Kmita, Nadine Fraudeau, Yann Hérault, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Point mutation of Hoxd12 in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Yonsei Med J (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3349/ymj.2008.49.6.965"}], "href": "https://doi.org/10.3349/ymj.2008.49.6.965"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19108020"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19108020"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Jin Yang, Xiaobai Liu, Yubo Zhao, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Exome sequencing of 1190 non-syndromic clubfoot cases reveals "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "HOXD12"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " as a novel disease gene."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Med Genet (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/jmg-2024-109846"}], "href": "https://doi.org/10.1136/jmg-2024-109846"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38663984"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38663984"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Elena Di Daniel, Man H S Mok, Emma Mead, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Endothelial Mitochondrial Preprotein Translocase Tomm7-Rac1 Signaling Axis Dominates Cerebrovascular Network Homeostasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.118.311538"}], "href": "https://doi.org/10.1161/ATVBAHA.118.311538"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30354240"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30354240"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Cameron Young, Dominyka Batkovskyte, Miyuki Kitamura, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A hypomorphic variant in the translocase of the outer mitochondrial membrane complex subunit TOMM7 causes short stature and developmental delay."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "HGG Adv (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.xhgg.2022.100148"}], "href": "https://doi.org/10.1016/j.xhgg.2022.100148"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36299998"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36299998"}]}]}]}
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| Synonyms | PRR23D2 |
| Proteins | P23D1_HUMAN |
| NCBI Gene ID | 100131608 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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PRR23D1 has 113 functional associations with biological entities spanning 3 categories (structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for PRR23D1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of PRR23D1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of PRR23D1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for PRR23D1 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR23D1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of PRR23D1 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |