PTCH1 Gene

Name patched 1
Description This gene encodes a member of the patched family of proteins and a component of the hedgehog signaling pathway. Hedgehog signaling is important in embryonic development and tumorigenesis. The encoded protein is the receptor for the secreted hedgehog ligands, which include sonic hedgehog, indian hedgehog and desert hedgehog. Following binding by one of the hedgehog ligands, the encoded protein is trafficked away from the primary cilium, relieving inhibition of the G-protein-coupled receptor smoothened, which results in activation of downstream signaling. Mutations of this gene have been associated with basal cell nevus syndrome and holoprosencephaly. [provided by RefSeq, Aug 2017]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nPTCH1 is the central receptor of the Hedgehog signaling pathway, acting as a key tumor suppressor and regulator of developmental processes. In its unliganded state PTCH1 inhibits the activity of Smoothened (SMO), thereby maintaining low levels of pathway‐activation; when Hedgehog ligands bind PTCH1 this inhibition is relieved, ultimately regulating cell proliferation, differentiation, and survival. In addition, PTCH1 functions as a dependence receptor that can actively trigger apoptosis in the absence of its ligand, and its structure and conserved transporter‐like features suggest that it may indirectly regulate signaling by modulating the distribution or concentration of small molecules such as cholesterol. Genetic studies have demonstrated that PTCH1 mutations underlie disorders such as Gorlin syndrome and contribute to sporadic tumors (e.g. basal cell carcinomas, medulloblastomas, keratocystic odontogenic tumors) and even influence quantitative traits like adult height and lung function. Moreover, epigenetic mechanisms and microRNAs (for example, miR‐212 and miR‐9) have been shown to regulate PTCH1 expression in various cancers, while altered promoter methylation in tumors such as breast carcinoma further confirms its pivotal role in tumorigenesis and tissue homeostasis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "27"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nRecent structural and mechanistic studies have illuminated the molecular architecture of PTCH1. Cryo‐electron microscopy analyses reveal that PTCH1 adopts a 12‐transmembrane conformation with two extracellular domains and a sterol‐sensing domain that binds cholesterol‐like molecules in defined pockets. These high‐resolution structures show that Hedgehog ligands engage PTCH1 through multiple interfaces—including palmitoylated and calcium‐mediated contacts—and induce conformational rearrangements that allow PTCH1’s ciliary removal and the subsequent derepression of SMO. Such insights highlight a unique mechanism in which PTCH1 may function as a transporter regulating cholesterol accessibility, thereby serving as a second messenger in Hedgehog signaling."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "28", "end_ref": "37"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Mi-Yeon Kim, Hyun Jeong Park, Seung-Cheol Baek, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mutations of the p53 and PTCH gene in basal cell carcinomas: UV mutation signature and strand bias."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Dermatol Sci (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0923-1811(01)00170-0"}], "href": "https://doi.org/10.1016/s0923-1811(01"}, {"type": "t", "text": "00170-0) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12007715"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12007715"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "J Taipale, M K Cooper, T Maiti, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Patched acts catalytically to suppress the activity of Smoothened."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature00989"}], "href": "https://doi.org/10.1038/nature00989"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12192414"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12192414"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Nathalie Boutet, Yves-Jean Bignon, Valérie Drouin-Garraud, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Spectrum of PTCH1 mutations in French patients with Gorlin syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Invest Dermatol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1046/j.1523-1747.2003.12423.x"}], "href": "https://doi.org/10.1046/j.1523-1747.2003.12423.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12925203"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12925203"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "K Ohki, H Kumamoto, R Ichinohasama, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PTC gene mutations and expression of SHH, PTC, SMO, and GLI-1 in odontogenic keratocysts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Oral Maxillofac Surg (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ijom.2004.01.013"}], "href": "https://doi.org/10.1016/j.ijom.2004.01.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15308259"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15308259"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "L Pastorino, R Cusano, S Nasti, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular characterization of Italian nevoid basal cell carcinoma syndrome patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mutat (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/humu.9317"}], "href": "https://doi.org/10.1002/humu.9317"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15712338"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15712338"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xiaoli Ma, Kai Chen, Shuhong Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Frequent activation of the hedgehog pathway in advanced gastric adenocarcinomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgi130"}], "href": "https://doi.org/10.1093/carcin/bgi130"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15905200"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15905200"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jason K Sicklick, Yin-Xiong Li, Alaa Melhem, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hedgehog signaling maintains resident hepatic progenitors throughout life."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Gastrointest Liver Physiol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpgi.00456.2005"}], "href": "https://doi.org/10.1152/ajpgi.00456.2005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16322088"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16322088"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Erika Lindström, Takashi Shimokawa, Rune Toftgård, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PTCH mutations: distribution and analyses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mutat (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/humu.20296"}], "href": "https://doi.org/10.1002/humu.20296"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16419085"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16419085"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ido Wolf, Shikha Bose, Julian C Desmond, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unmasking of epigenetically silenced genes reveals DNA promoter methylation and reduced expression of PTCH in breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Breast Cancer Res Treat (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10549-006-9440-4"}], "href": "https://doi.org/10.1007/s10549-006-9440-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17295047"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17295047"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Yue-Hong Bian, Shu-Hong Huang, Ling Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sonic hedgehog-Gli1 pathway in colorectal adenocarcinomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "World J Gastroenterol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3748/wjg.v13.i11.1659"}], "href": "https://doi.org/10.3748/wjg.v13.i11.1659"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17461467"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17461467"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Michael N Weedon, Hana Lango, Cecilia M Lindgren, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association analysis identifies 20 loci that influence adult height."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.121"}], "href": "https://doi.org/10.1038/ng.121"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18391952"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18391952"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Satyabrata Sinha, Ratnesh K Singh, Neyaz Alam, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Alterations in candidate genes PHF2, FANCC, PTCH1 and XPA at chromosomal 9q22.3 region: pathological significance in early- and late-onset breast carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1476-4598-7-84"}], "href": "https://doi.org/10.1186/1476-4598-7-84"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18990233"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18990233"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Frédéric Mille, Chantal Thibert, Joanna Fombonne, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Patched dependence receptor triggers apoptosis through a DRAL-caspase-9 complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb1880"}], "href": "https://doi.org/10.1038/ncb1880"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19465923"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19465923"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Tonia C Carter, Anne M Molloy, Faith Pangilinan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Testing reported associations of genetic risk factors for oral clefts in a large Irish study population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Birth Defects Res A Clin Mol Teratol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/bdra.20639"}], "href": "https://doi.org/10.1002/bdra.20639"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19937600"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19937600"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Dana B Hancock, Mark Eijgelsheim, Jemma B Wilk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.500"}], "href": "https://doi.org/10.1038/ng.500"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20010835"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20010835"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Shuang Pan, Qing Dong, Li-Sha Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mechanisms of inactivation of PTCH1 gene in nevoid basal cell carcinoma syndrome: modification of the two-hit hypothesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Cancer Res (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1078-0432.CCR-09-2574"}], "href": "https://doi.org/10.1158/1078-0432.CCR-09-2574"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20068110"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20068110"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Sally E de Zwaan, Nikolas K Haass "}, {"type": "b", "children": [{"type": "t", "text": "Genetics of basal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Australas J Dermatol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1440-0960.2009.00579.x"}], "href": "https://doi.org/10.1111/j.1440-0960.2009.00579.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20546211"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20546211"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Mehdi H Shahi, Mohammad Afzal, Subrata Sinha, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of sonic hedgehog-GLI1 downstream target genes PTCH1, Cyclin D2, Plakoglobin, PAX6 and NKX2.2 and their epigenetic status in medulloblastoma and astrocytoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Cancer (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1471-2407-10-614"}], "href": "https://doi.org/10.1186/1471-2407-10-614"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21059263"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21059263"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Stefania Trazzi, Valentina Maria Mitrugno, Emanuele Valli, et al. "}, {"type": "b", "children": [{"type": "t", "text": "APP-dependent up-regulation of Ptch1 underlies proliferation impairment of neural precursors in Down syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddr033"}], "href": "https://doi.org/10.1093/hmg/ddr033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21266456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21266456"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Michel Bidet, Olivier Joubert, Benoit Lacombe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The hedgehog receptor patched is involved in cholesterol transport."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0023834"}], "href": "https://doi.org/10.1371/journal.pone.0023834"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21931618"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21931618"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Yuan Li, Deqiang Zhang, Chengwen Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-212 displays tumor-promoting properties in non-small cell lung cancer cells and targets the hedgehog pathway receptor PTCH1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.E11-09-0777"}], "href": "https://doi.org/10.1091/mbc.E11-09-0777"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22357618"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22357618"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Chihiro Kijima, Toshiyuki Miyashita, Maiko Suzuki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Two cases of nevoid basal cell carcinoma syndrome associated with meningioma caused by a PTCH1 or SUFU germline mutation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Fam Cancer (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10689-012-9548-0"}], "href": "https://doi.org/10.1007/s10689-012-9548-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22829011"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22829011"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Yan-Yan Guo, Jian-Yun Zhang, Xue-Fen Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PTCH1 gene mutations in Keratocystic odontogenic tumors: a study of 43 Chinese patients and a systematic review."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0077305"}], "href": "https://doi.org/10.1371/journal.pone.0077305"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24204797"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24204797"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Chenchao Ma, Kate Nong, Bo Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-212 promotes pancreatic cancer cell growth and invasion by targeting the hedgehog signaling pathway receptor patched-1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Clin Cancer Res (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1756-9966-33-54"}], "href": "https://doi.org/10.1186/1756-9966-33-54"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24961235"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24961235"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Miriam J Smith, Christian Beetz, Simon G Williams, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Germline mutations in SUFU cause Gorlin syndrome-associated childhood medulloblastoma and redefine the risk associated with PTCH1 mutations."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Oncol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1200/JCO.2014.58.2569"}], "href": "https://doi.org/10.1200/JCO.2014.58.2569"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25403219"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25403219"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Jiafei Qu, Feiyan Yu, Yingying Hong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Underestimated PTCH1 mutation rate in sporadic keratocystic odontogenic tumors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oral Oncol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.oraloncology.2014.09.016"}], "href": "https://doi.org/10.1016/j.oraloncology.2014.09.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25458233"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25458233"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Jessian L Munoz, Vivian Rodriguez-Cruz, Shakti H Ramkissoon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Temozolomide resistance in glioblastoma occurs by miRNA-9-targeted PTCH1, independent of sonic hedgehog level."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.2778"}], "href": "https://doi.org/10.18632/oncotarget.2778"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25595896"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25595896"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Jynho Kim, Elaine Y C Hsia, Amira Brigui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The role of ciliary trafficking in Hedgehog receptor signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Signal (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scisignal.aaa5622"}], "href": "https://doi.org/10.1126/scisignal.aaa5622"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26038600"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26038600"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Jianjian Zheng, Fujun Yu, Peihong Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA PVT1 activates hepatic stellate cells through competitively binding microRNA-152."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.11709"}], "href": "https://doi.org/10.18632/oncotarget.11709"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27588491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27588491"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "D Gareth Evans, Deemesh Oudit, Miriam J Smith, et al. "}, {"type": "b", "children": [{"type": "t", "text": "First evidence of genotype-phenotype correlations in Gorlin syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Med Genet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/jmedgenet-2017-104669"}], "href": "https://doi.org/10.1136/jmedgenet-2017-104669"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28596197"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28596197"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Cristina R Antonescu, Narasimhan P Agaram, Yun-Shao Sung, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Distinct Malignant Epithelioid Neoplasm With GLI1 Gene Rearrangements, Frequent S100 Protein Expression, and Metastatic Potential: Expanding the Spectrum of Pathologic Entities With ACTB/MALAT1/PTCH1-GLI1 Fusions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Surg Pathol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/PAS.0000000000001010"}], "href": "https://doi.org/10.1097/PAS.0000000000001010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29309307"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29309307"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Xin Gong, Hongwu Qian, Pingping Cao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural basis for the recognition of Sonic Hedgehog by human Patched1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.aas8935"}], "href": "https://doi.org/10.1126/science.aas8935"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29954986"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29954986"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Xiaofeng Qi, Philip Schmiege, Elias Coutavas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structures of human Patched and its complex with native palmitoylated sonic hedgehog."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41586-018-0308-7"}], "href": "https://doi.org/10.1038/s41586-018-0308-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29995851"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29995851"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Xiaofeng Qi, Philip Schmiege, Elias Coutavas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Two Patched molecules engage distinct sites on Hedgehog yielding a signaling-competent complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.aas8843"}], "href": "https://doi.org/10.1126/science.aas8843"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30139912"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30139912"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Hongwu Qian, Pingping Cao, Miaohui Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inhibition of tetrameric Patched1 by Sonic Hedgehog through an asymmetric paradigm."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-019-10234-9"}], "href": "https://doi.org/10.1038/s41467-019-10234-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31127104"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31127104"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "Chao Qi, Giulio Di Minin, Irene Vercellino, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural basis of sterol recognition by human hedgehog receptor PTCH1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Adv (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/sciadv.aaw6490"}], "href": "https://doi.org/10.1126/sciadv.aaw6490"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31555730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31555730"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Arun Radhakrishnan, Rajat Rohatgi, Christian Siebold "}, {"type": "b", "children": [{"type": "t", "text": "Cholesterol access in cellular membranes controls Hedgehog signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Chem Biol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41589-020-00678-2"}], "href": "https://doi.org/10.1038/s41589-020-00678-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33199907"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33199907"}]}]}]}
Synonyms HPE7, PTC1, PTCH11, PTCH, NBCCS, BCNS
Proteins PTC1_HUMAN
NCBI Gene ID 5727
API
Download Associations
Predicted Functions View PTCH1's ARCHS4 Predicted Functions.
Co-expressed Genes View PTCH1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PTCH1's ARCHS4 Predicted Functions.

Functional Associations

PTCH1 has 13,939 functional associations with biological entities spanning 9 categories (molecular profile, organism, functional term, phrase or reference, chemical, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 132 datasets.

Click the + buttons to view associations for PTCH1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Achilles Cell Line Gene Essentiality Profiles cell lines with fitness changed by PTCH1 gene knockdown relative to other cell lines from the Achilles Cell Line Gene Essentiality Profiles dataset.
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of PTCH1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of PTCH1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
Biocarta Pathways pathways involving PTCH1 protein from the Biocarta Pathways dataset.
BioGPS Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset.
BioGPS Human Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of PTCH1 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset.
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of PTCH1 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of PTCH1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of PTCH1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
CCLE Cell Line Gene Mutation Profiles cell lines with PTCH1 gene mutations from the CCLE Cell Line Gene Mutation Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with PTCH1 gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of PTCH1 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of PTCH1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of PTCH1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
ClinVar Gene-Phenotype Associations phenotypes associated with PTCH1 gene from the curated ClinVar Gene-Phenotype Associations dataset.
ClinVar Gene-Phenotype Associations 2025 phenotypes associated with PTCH1 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset.
CMAP Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PTCH1 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores cellular components containing PTCH1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PTCH1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores cellular components co-occuring with PTCH1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PTCH1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
CORUM Protein Complexes protein complexs containing PTCH1 protein from the CORUM Protein Complexes dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of PTCH1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene Mutation Profiles cell lines with PTCH1 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset.
CTD Gene-Chemical Interactions chemicals interacting with PTCH1 gene/protein from the curated CTD Gene-Chemical Interactions dataset.
CTD Gene-Disease Associations diseases associated with PTCH1 gene/protein from the curated CTD Gene-Disease Associations dataset.
dbGAP Gene-Trait Associations traits associated with PTCH1 gene in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by PTCH1 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Curated Gene-Disease Association Evidence Scores diseases involving PTCH1 gene from the DISEASES Curated Gene-Disease Assocation Evidence Scores dataset.
DISEASES Curated Gene-Disease Association Evidence Scores 2025 diseases involving PTCH1 gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores diseases associated with PTCH1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with PTCH1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores diseases co-occuring with PTCH1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PTCH1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with PTCH1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with PTCH1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at PTCH1 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of PTCH1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of PTCH1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing PTCH1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GAD Gene-Disease Associations diseases associated with PTCH1 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.
GAD High Level Gene-Disease Associations diseases associated with PTCH1 gene in GWAS and other genetic association datasets from the GAD High Level Gene-Disease Associations dataset.
GDSC Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with PTCH1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing PTCH1 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of PTCH1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GO Biological Process Annotations 2015 biological processes involving PTCH1 gene from the curated GO Biological Process Annotations 2015 dataset.
GO Biological Process Annotations 2023 biological processes involving PTCH1 gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving PTCH1 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2015 cellular components containing PTCH1 protein from the curated GO Cellular Component Annotations 2015 dataset.
GO Cellular Component Annotations 2023 cellular components containing PTCH1 protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing PTCH1 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2015 molecular functions performed by PTCH1 gene from the curated GO Molecular Function Annotations 2015 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by PTCH1 gene from the curated GO Molecular Function Annotations 2023 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PTCH1 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of PTCH1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of PTCH1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PTCH1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with PTCH1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with PTCH1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
GWASdb SNP-Disease Associations diseases associated with PTCH1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with PTCH1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of PTCH1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of PTCH1 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
HPO Gene-Disease Associations phenotypes associated with PTCH1 gene by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.
Hub Proteins Protein-Protein Interactions interacting hub proteins for PTCH1 from the curated Hub Proteins Protein-Protein Interactions dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with PTCH1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
InterPro Predicted Protein Domain Annotations protein domains predicted for PTCH1 protein from the InterPro Predicted Protein Domain Annotations dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PTCH1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of PTCH1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of PTCH1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
KEGG Pathways pathways involving PTCH1 protein from the KEGG Pathways dataset.
KEGG Pathways 2026 pathways involving PTCH1 protein from the KEGG Pathways 2026 dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PTCH1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of PTCH1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles cell lines with PTCH1 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of PTCH1 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of PTCH1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of PTCH1 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PTCH1 gene from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
LOCATE Curated Protein Localization Annotations cellular components containing PTCH1 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain PTCH1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by PTCH1 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
MiRTarBase microRNA Targets microRNAs targeting PTCH1 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of PTCH1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
MPO Gene-Phenotype Associations phenotypes of transgenic mice caused by PTCH1 gene mutations from the MPO Gene-Phenotype Associations dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of PTCH1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of PTCH1 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
OMIM Gene-Disease Associations phenotypes associated with PTCH1 gene from the curated OMIM Gene-Disease Associations dataset.
PANTHER Pathways pathways involving PTCH1 protein from the PANTHER Pathways dataset.
Pathway Commons Protein-Protein Interactions interacting proteins for PTCH1 from the Pathway Commons Protein-Protein Interactions dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of PTCH1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations gene perturbations changing expression of PTCH1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
PFOCR Pathway Figure Associations 2023 pathways involving PTCH1 protein from the PFOCR Pathway Figure Associations 2023 dataset.
PFOCR Pathway Figure Associations 2024 pathways involving PTCH1 protein from the Wikipathways PFOCR 2024 dataset.
PID Pathways pathways involving PTCH1 protein from the PID Pathways dataset.
Reactome Pathways 2014 pathways involving PTCH1 protein from the Reactome Pathways dataset.
Reactome Pathways 2024 pathways involving PTCH1 protein from the Reactome Pathways 2024 dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of PTCH1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles cell types and tissues with high or low expression of PTCH1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at PTCH1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PTCH1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PTCH1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of PTCH1 gene from the Sci-Plex Drug Perturbation Signatures dataset.
SynGO Synaptic Gene Annotations synaptic terms associated with PTCH1 gene from the SynGO Synaptic Gene Annotations dataset.
Tabula Sapiens Gene-Cell Associations cell types with high or low expression of PTCH1 gene relative to other cell types from the Tabula Sapiens Gene-Cell Associations dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of PTCH1 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TargetScan Predicted Conserved microRNA Targets microRNAs regulating expression of PTCH1 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of PTCH1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of PTCH1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores tissues with high expression of PTCH1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PTCH1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores tissues with high expression of PTCH1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of PTCH1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores tissues co-occuring with PTCH1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with PTCH1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.
WikiPathways Pathways 2014 pathways involving PTCH1 protein from the Wikipathways Pathways 2014 dataset.
WikiPathways Pathways 2024 pathways involving PTCH1 protein from the WikiPathways Pathways 2024 dataset.