| Name | RNA binding motif protein, Y-linked, family 2, member F pseudogene |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough the provided texts do not mention RBMY2FP explicitly, they describe a receptor—GPR180—that functions as an important regulator of metabolic homeostasis. In the first study, GPR180 is characterized not as a classical G protein-coupled receptor but rather as an integral component of the transforming growth factor–β (TGFβ) signaling pathway. It facilitates the low‐grade activation of the pathway by modulating SMAD3 phosphorylation, thereby integrating the action of the secreted protein CTHRC1. This modulation ultimately supports the activation of thermogenic brown and beige adipocytes, contributing to improved whole‐body glucose metabolism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}, {"type": "p", "children": [{"type": "t", "text": "\nIn the second study, the role of GPR180 is extended to hepatic lipid metabolism. Here, elevated GPR180 levels in the liver of obese, high-fat diet–induced mice are linked to increased triglyceride and cholesterol synthesis. Hepatocyte-specific knockdown or genetic deletion of Gpr180 resulted in lower lipid accumulation in both liver and plasma, reduced adiposity, and enhanced energy metabolism. These metabolic improvements are associated with the downregulation of key lipogenic transcription factors—including SREBP1 and SREBP2—and reduced PKA-mediated phosphorylation, which collectively modulate lipid synthetic pathways."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}]}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lucia Balazova, Miroslav Balaz, Carla Horvath, et al. "}, {"type": "b", "children": [{"type": "t", "text": "GPR180 is a component of TGFβ signalling that promotes thermogenic adipocyte function and mediates the metabolic effects of the adipocyte-secreted factor CTHRC1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-021-27442-x"}], "href": "https://doi.org/10.1038/s41467-021-27442-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34880217"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34880217"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yunhua Zhang, Ziming Zhu, Lijun Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hepatic G Protein-Coupled Receptor 180 Deficiency Ameliorates High Fat Diet-Induced Lipid Accumulation via the Gi-PKA-SREBP Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nutrients (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/nu15081838"}], "href": "https://doi.org/10.3390/nu15081838"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37111058"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37111058"}]}]}]}
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| NCBI Gene ID | 159162 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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RBMY2FP has 770 functional associations with biological entities spanning 5 categories (molecular profile, chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.
Click the + buttons to view associations for RBMY2FP from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of RBMY2FP gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of RBMY2FP gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of RBMY2FP gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of RBMY2FP gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of RBMY2FP gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| CTD Gene-Disease Associations | diseases associated with RBMY2FP gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at RBMY2FP gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of RBMY2FP gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of RBMY2FP gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of RBMY2FP gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of RBMY2FP gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of RBMY2FP gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of RBMY2FP gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of RBMY2FP gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of RBMY2FP gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of RBMY2FP gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of RBMY2FP gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of RBMY2FP gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |