RPL29P2 Gene

Name ribosomal protein L29 pseudogene 2
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent research has identified the long noncoding RNA RPL29P2 as a significant player in the pathogenesis of peritoneal membrane fibrosis (PMF) observed in long-term peritoneal dialysis (PD) patients. Elevated levels of RPL29P2 in the peritoneal membrane correlate with both the severity of fibrosis and the associated loss of peritoneal transport function. Functional studies, including in vitro assays with human peritoneal mesothelial cells and in vivo rat models, have demonstrated that RPL29P2 acts by targeting miR-1184, leading to the upregulation of collagen type I alpha 1 chain (COL1A1). This molecular interplay appears to drive the high-glucose-induced phenotypic transition of mesothelial cells, contributing to fibrosis. Importantly, experimental silencing of RPL29P2 in a PD rat model has shown promise in alleviating fibrosis and preserving transport function, underscoring its potential as both a biomarker and therapeutic target in managing PMF."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Huan Li, Yuting Zhang, Mingwen Che, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA RPL29P2 promotes peritoneal fibrosis and impairs peritoneal transport function via miR-1184 in peritoneal dialysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Med Sci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/ijms.93547"}], "href": "https://doi.org/10.7150/ijms.93547"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38774747"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38774747"}]}]}]}
Synonyms RPL29_10_1510
NCBI Gene ID 118432
API
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Predicted Functions View RPL29P2's ARCHS4 Predicted Functions.
Co-expressed Genes View RPL29P2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View RPL29P2's ARCHS4 Predicted Functions.

Functional Associations

RPL29P2 has 581 functional associations with biological entities spanning 6 categories (molecular profile, organism, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.

Click the + buttons to view associations for RPL29P2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of RPL29P2 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of RPL29P2 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of RPL29P2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of RPL29P2 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of RPL29P2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
CTD Gene-Chemical Interactions chemicals interacting with RPL29P2 gene/protein from the curated CTD Gene-Chemical Interactions dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RPL29P2 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of RPL29P2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of RPL29P2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing RPL29P2 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of RPL29P2 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of RPL29P2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of RPL29P2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of RPL29P2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RPL29P2 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of RPL29P2 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.