RRP7BP Gene

Name ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
Description Predicted to be involved in rRNA processing and ribosomal small subunit assembly. Predicted to be part of CURI complex and UTP-C complex. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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It functions as a transcriptional co‐activator by interacting with various DNA binding proteins – for example, Tbx1 in cardiac progenitors"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", Ap2δ in gene‐specific recruitment"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", and the non‐coding RNA Xist."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In embryonic stem cells, ASH2L is critical for maintaining open chromatin states and pluripotency, working in tandem with factors such as Oct4"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "and through binding to super‐enhancers of core stemness genes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " Moreover, its deletion in mouse embryonic fibroblasts results in global reduction of H3K4 trimethylation and drives a senescence phenotype."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "8"}, {"type": "fg_f", "ref": "2"}, {"type": "fg_fs", "start_ref": "4", "end_ref": "6"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond maintaining pluripotency, ASH2L orchestrates lineage‐ and tissue-specific gene expression programs during development. Its role is demonstrated in neural tissues where it is essential for neocortical development and proper neural progenitor cell proliferation"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": ", in the hematopoietic system where it is required for balanced cell cycle progression and differentiation"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": ", and in epithelial lineages affecting both dental amelogenesis"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "and epidermal/hair follicle morphogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " In addition, in breast epithelial cells ASH2L enhances estrogen receptor‐α transcription via its interaction with GATA3"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}]}, {"type": "t", "text": ", underscoring its broad impact in developmental and tissue‐specific contexts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "14"}, {"type": "fg_f", "ref": "11"}, {"type": "fg_f", "ref": "9"}, {"type": "fg_f", "ref": "12"}, {"type": "fg_f", "ref": "10"}, {"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nASH2L also has pivotal roles in pathological contexts. In models of diabetic complications, its upregulation in glomerular mesangial and endothelial cells promotes fibrosis and inflammation by facilitating H3K4 trimethylation at promoters of key mediators such as HIPK2 and ADAM17."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": " In vascular endothelium, elevated ASH2L drives endothelial dysfunction and atherosclerotic lesion formation via enhanced expression of scavenger receptors and activation of NF-κB signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": " Additionally, ASH2L stabilizes components of the COMPASS complex—evidenced by its role in protecting DPY30 from ubiquitin-mediated degradation, a mechanism influencing cell cycle regulators such as cyclin D1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}]}, {"type": "t", "text": "."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}, {"type": "fg_f", "ref": "18"}, {"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jason Z Stoller, Li Huang, Cheryl C Tan, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Transcription factor Ap2delta associates with Ash2l and ALR, a trithorax family histone methyltransferase, to activate Hoxc8 transcription."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0711896105"}], "href": "https://doi.org/10.1073/pnas.0711896105"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18495928"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18495928"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Cheryl C Tan, Martin J Walsh, Bruce D Gelb "}, {"type": "b", "children": [{"type": "t", "text": "Fgfr3 is a transcriptional target of Ap2delta and Ash2l-containing histone methyltransferase complexes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0008535"}], "href": "https://doi.org/10.1371/journal.pone.0008535"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20046871"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20046871"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Minghui Yue, Akiyo Ogawa, Norishige Yamada, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Xist RNA repeat E is essential for ASH2L recruitment to the inactive X and regulates histone modifications and escape gene expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1006890"}], "href": "https://doi.org/10.1371/journal.pgen.1006890"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28686623"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28686623"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Shuang Li, Feng Xiao, Junmei Zhang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Loss of the Ash2l subunit of histone H3K4 methyltransferase complexes reduces chromatin accessibility at promoters."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-022-25881-0"}], "href": "https://doi.org/10.1038/s41598-022-25881-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36513698"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36513698"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Ma Wan, Jiancong Liang, Yuanyan Xiong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The trithorax group protein Ash2l is essential for pluripotency and maintaining open chromatin in embryonic stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M112.424515"}], "href": "https://doi.org/10.1074/jbc.M112.424515"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23239880"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23239880"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Liang Li, Xiangbin Ruan, Chang Wen, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "ASH2L regulates postnatal neurogenesis through Onecut2-mediated inhibition of TGF-β signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Differ (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41418-023-01189-y"}], "href": "https://doi.org/10.1038/s41418-023-01189-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37433907"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37433907"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Juliane Lüscher-Firzlaff, Nicolas Chatain, Chao-Chung Kuo, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "ASH2L Mediates Epidermal Differentiation and Hair Follicle Morphogenesis through H3K4me3 Modification."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Invest Dermatol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jid.2024.03.035"}], "href": "https://doi.org/10.1016/j.jid.2024.03.035"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38582368"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38582368"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Jin Qi, Lei Huo, Yiwei Tony Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Absent, small or homeotic 2-like protein (ASH2L) enhances the transcription of the estrogen receptor α gene through GATA-binding protein 3 (GATA3)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M114.579839"}], "href": "https://doi.org/10.1074/jbc.M114.579839"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25258321"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25258321"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Wen Zhong, Chen Hong, Yejun Dong, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Functional role of Ash2l in oxLDL induced endothelial dysfunction and atherosclerosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Life Sci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00018-024-05130-5"}], "href": "https://doi.org/10.1007/s00018-024-05130-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38280036"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38280036"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Mengjie Ma, Jiafeng Zhou, Zhihua Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Ash2l SDI Domain Is Required to Maintain the Stability and Binding of DPY30."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cells (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cells11091450"}], "href": "https://doi.org/10.3390/cells11091450"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35563756"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35563756"}]}]}]}
Synonyms RRP7B, DJ222E13.2
Proteins RRP7B_HUMAN
NCBI Gene ID 91695
API
Download Associations
Predicted Functions View RRP7BP's ARCHS4 Predicted Functions.
Co-expressed Genes View RRP7BP's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View RRP7BP's ARCHS4 Predicted Functions.

Functional Associations

RRP7BP has 2,019 functional associations with biological entities spanning 6 categories (molecular profile, organism, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 24 datasets.

Click the + buttons to view associations for RRP7BP from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of RRP7BP gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of RRP7BP gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of RRP7BP gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of RRP7BP gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of RRP7BP gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with RRP7BP gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of RRP7BP gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RRP7BP gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of RRP7BP gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of RRP7BP gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of RRP7BP gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of RRP7BP gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of RRP7BP gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GO Biological Process Annotations 2023 biological processes involving RRP7BP gene from the curated GO Biological Process Annotations 2023 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of RRP7BP gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of RRP7BP gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of RRP7BP gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of RRP7BP gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of RRP7BP gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of RRP7BP gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of RRP7BP gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of RRP7BP gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RRP7BP gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of RRP7BP gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.