SCGB1C2 Gene

HGNC Family Secretoglobins (SCGB)
Name secretoglobin, family 1C, member 2
Description Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent evidence indicates that SCGB1C2 functions as a critical regulatory factor during early viral infection. In one study, a mutant mammalian cell line that was resistant to infection by various retroviruses was shown to lack this factor, resulting in a block at an early step of the viral life cycle—specifically during uncoating. The rescue of infection with a proteasome inhibitor suggests that SCGB1C2 may play a role in modulating proteasomal activity essential for uncoating and efficient viral entry."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n \nDis primis duis mauris potenti non at sociosqu ultricies massa. Recent mouse models have further extended the functional repertoire of SCGB1C2, implicating it in the non-homologous end-joining (NHEJ) DNA repair pathway. Here, SCGB1C2 seems to act redundantly with other NHEJ factors, such as XLF and PAXX, and its deficiency—even in combination with mutations in other repair genes—can result in impaired lymphocyte development and embryonic lethality. This genetic interaction underlines its importance in maintaining genomic stability and proper immune function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n \nFusce class lectus fringilla commodo sit blandit pellentesque. Collectively, these findings establish that SCGB1C2 serves dual roles: first, as an essential facilitator of retroviral uncoating via regulation of proteasomal activity, and second, as a participant in the NHEJ repair pathway critical for immune system development. This integrative function underscores its potential as a therapeutic target in both antiviral strategies and the treatment of immunodeficiency disorders."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sumit Agarwal, Josephine Harada, Jeffrey Schreifels, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Isolation, characterization, and genetic complementation of a cellular mutant resistant to retroviral infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0602674103"}], "href": "https://doi.org/10.1073/pnas.0602674103"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17043244"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17043244"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Sergio Castañeda-Zegarra, Qindong Zhang, Amin Alirezaylavasani, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Leaky severe combined immunodeficiency in mice lacking non-homologous end joining factors XLF and MRI."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.202346"}], "href": "https://doi.org/10.18632/aging.202346"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33289702"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33289702"}]}]}]}
Synonyms SCGB1C1
Proteins SG1C2_HUMAN
NCBI Gene ID 653486
API
Download Associations
Predicted Functions View SCGB1C2's ARCHS4 Predicted Functions.
Co-expressed Genes View SCGB1C2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SCGB1C2's ARCHS4 Predicted Functions.

Functional Associations

SCGB1C2 has 298 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 14 datasets.

Click the + buttons to view associations for SCGB1C2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of SCGB1C2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with SCGB1C2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with SCGB1C2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of SCGB1C2 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of SCGB1C2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with SCGB1C2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by SCGB1C2 gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of SCGB1C2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of SCGB1C2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of SCGB1C2 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of SCGB1C2 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of SCGB1C2 gene from the RummaGEO Gene Perturbation Signatures dataset.
Tabula Sapiens Gene-Cell Associations cell types with high or low expression of SCGB1C2 gene relative to other cell types from the Tabula Sapiens Gene-Cell Associations dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with SCGB1C2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.