| HGNC Family | La ribonucleoprotein domain containing (LARP), RNA binding motif containing (RBM) |
| Name | Sjogren syndrome antigen B (autoantigen La) |
| Description | The protein encoded by this gene is involved in diverse aspects of RNA metabolism, including binding and protecting poly(U) termini of nascent RNA polymerase III transcripts from exonuclease digestion, processing 5' and 3' ends of pre-tRNA precursors, acting as an RNA chaperone, and binding viral RNAs associated with hepatitis C virus. Autoantibodies reacting with this protein are found in the sera of patients with Sjogren syndrome and systemic lupus erythematosus. Alternative promoter usage results in two different transcript variants which encode the same protein. [provided by RefSeq, Jun 2014] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSSB (also known as the La autoantigen) is a multifaceted RNA‐binding protein essential for RNA metabolism. In the nucleus it specifically recognizes the 3′ UUU–OH motifs of nascent RNA polymerase III transcripts—including pre–tRNAs and 5S rRNA precursors—thereby protecting these RNAs from exonucleolytic decay and facilitating proper RNA folding through RNA chaperone activity. Moreover, SSB regulates the biogenesis and function of several small regulatory RNAs, including pre–microRNAs, by binding to their structured elements and influencing subsequent maturation events. Such activities are critical not only for accurate tRNA processing but also for maintaining the integrity of cellular RNA pools that govern protein synthesis and gene expression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its housekeeping role in RNA maturation, SSB exerts pivotal functions during viral infections. It directly binds to highly structured viral RNA elements such as internal ribosome entry sites (IRES) and untranslated regions in pathogens including hepatitis C virus, Coxsackievirus, and Japanese encephalitis virus. In doing so, SSB modulates viral translation and genome replication by either competing with or cooperating with other host factors, thus influencing the switch between translation and replication of viral RNAs. Such interactions may also affect nuclear–cytoplasmic shuttling and the assembly of viral ribonucleoprotein complexes, thereby impacting the overall efficiency of the viral life cycle."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "25"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its roles in RNA processing and viral gene regulation, SSB is implicated in diverse cellular pathways that impact disease. Its aberrant expression or misregulation has been linked to autoimmune disorders such as Sjögren’s syndrome and systemic lupus erythematosus, where SSB serves as a major autoantigen. Furthermore, by modulating IRES‐mediated translation of critical cell cycle and survival mRNAs (for example, those encoding cyclin D1 and Bcl2) and by influencing RNA interference and stress responses, SSB contributes to oncogenic transformation and chemoresistance. In some contexts, SSB-mediated opsonization of apoptotic cells also appears to trigger inflammatory cascades, further underlining its importance in health and disease."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "26", "end_ref": "38"}, {"type": "fg_f", "ref": "24"}, {"type": "fg_fs", "start_ref": "39", "end_ref": "41"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Robert V Intine, Miroslav Dundr, Tom Misteli, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Aberrant nuclear trafficking of La protein leads to disordered processing of associated precursor tRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1097-2765(02)00533-6"}], "href": "https://doi.org/10.1016/s1097-2765(02"}, {"type": "t", "text": "00533-6) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12049746"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12049746"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Robert V Intine, Scott A Tenenbaum, Amy L Sakulich, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential phosphorylation and subcellular localization of La RNPs associated with precursor tRNAs and translation-related mRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1097-2765(03)00429-5"}], "href": "https://doi.org/10.1016/s1097-2765(03"}, {"type": "t", "text": "00429-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14636586"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14636586"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Caterina Alfano, Domenico Sanfelice, Jeff Babon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural analysis of cooperative RNA binding by the La motif and central RRM domain of human La protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Struct Mol Biol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nsmb747"}], "href": "https://doi.org/10.1038/nsmb747"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15004549"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15004549"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Elena I Schwartz, Robert V Intine, Richard J Maraia "}, {"type": "b", "children": [{"type": "t", "text": "CK2 is responsible for phosphorylation of human La protein serine-366 and can modulate rpL37 5'-terminal oligopyrimidine mRNA metabolism."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.24.21.9580-9591.2004"}], "href": "https://doi.org/10.1128/MCB.24.21.9580-9591.2004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15485924"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15485924"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Robert V Intine, Miroslav Dundr, Alex Vassilev, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nonphosphorylated human La antigen interacts with nucleolin at nucleolar sites involved in rRNA biogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.24.24.10894-10904.2004"}], "href": "https://doi.org/10.1128/MCB.24.24.10894-10904.2004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15572691"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15572691"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Marianna Teplova, Yu-Ren Yuan, Anh Tuân Phan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural basis for recognition and sequestration of UUU(OH) 3' temini of nascent RNA polymerase III transcripts by La, a rheumatic disease autoantigen."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2005.10.027"}], "href": "https://doi.org/10.1016/j.molcel.2005.10.027"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16387655"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16387655"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Mark A Bayfield, Trish E Kaiser, Robert V Intine, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Conservation of a masked nuclear export activity of La proteins and its effects on tRNA maturation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.00026-07"}], "href": "https://doi.org/10.1128/MCB.00026-07"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17308035"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17308035"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Mark A Bayfield, Richard J Maraia "}, {"type": "b", "children": [{"type": "t", "text": "Precursor-product discrimination by La protein during tRNA metabolism."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Struct Mol Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nsmb.1573"}], "href": "https://doi.org/10.1038/nsmb.1573"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19287396"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19287396"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Amir R Naeeni, Maria R Conte, Mark A Bayfield "}, {"type": "b", "children": [{"type": "t", "text": "RNA chaperone activity of human La protein is mediated by variant RNA recognition motif."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.276071"}], "href": "https://doi.org/10.1074/jbc.M111.276071"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22203678"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22203678"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Chunyang Liang, Ke Xiong, Keith E Szulwach, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sjogren syndrome antigen B (SSB)/La promotes global microRNA expression by binding microRNA precursors through stem-loop recognition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M112.401323"}], "href": "https://doi.org/10.1074/jbc.M112.401323"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23129761"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23129761"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Sven Horke, Kerstin Reumann, Andreas Rang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular characterization of the human La protein.hepatitis B virus RNA.B interaction in vitro."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M201911200"}], "href": "https://doi.org/10.1074/jbc.M201911200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12121976"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12121976"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Partho Sarothi Ray, Saumitra Das "}, {"type": "b", "children": [{"type": "t", "text": "La autoantigen is required for the internal ribosome entry site-mediated translation of Coxsackievirus B3 RNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkf583"}], "href": "https://doi.org/10.1093/nar/gkf583"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12384597"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12384597"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Renuka Pudi, Saraswathi Abhiman, Narayanaswamy Srinivasan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hepatitis C virus internal ribosome entry site-mediated translation is stimulated by specific interaction of independent regions of human La autoantigen."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M210287200"}], "href": "https://doi.org/10.1074/jbc.M210287200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12540850"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12540850"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Rosa Martha E Yocupicio-Monroy, Fernando Medina, Jorge Reyes-del Valle, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cellular proteins from human monocytes bind to dengue 4 virus minus-strand 3' untranslated region RNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Virol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/jvi.77.5.3067-3076.2003"}], "href": "https://doi.org/10.1128/jvi.77.5.3067-3076.2003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12584332"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12584332"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Beatriz María García-Montalvo, Fernando Medina, Rosa M del Angel "}, {"type": "b", "children": [{"type": "t", "text": "La protein binds to NS5 and NS3 and to the 5' and 3' ends of Dengue 4 virus RNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Virus Res (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.virusres.2004.01.024"}], "href": "https://doi.org/10.1016/j.virusres.2004.01.024"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15084396"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15084396"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Angela M Domitrovich, Kevin W Diebel, Naushad Ali, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of La autoantigen and polypyrimidine tract-binding protein in HCV replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Virology (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.virol.2005.02.009"}], "href": "https://doi.org/10.1016/j.virol.2005.02.009"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15823607"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15823607"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Victor Fok, Kyle Friend, Joan A Steitz "}, {"type": "b", "children": [{"type": "t", "text": "Epstein-Barr virus noncoding RNAs are confined to the nucleus, whereas their partner, the human La protein, undergoes nucleocytoplasmic shuttling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200601026"}], "href": "https://doi.org/10.1083/jcb.200601026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16682524"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16682524"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Susann Cordes, Yuri Kusov, Tilman Heise, et al. "}, {"type": "b", "children": [{"type": "t", "text": "La autoantigen suppresses IRES-dependent translation of the hepatitis A virus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2008.01.163"}], "href": "https://doi.org/10.1016/j.bbrc.2008.01.163"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18282467"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18282467"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Surender Vashist, Manu Anantpadma, Himani Sharma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "La protein binds the predicted loop structures in the 3' non-coding region of Japanese encephalitis virus genome: role in virus replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Gen Virol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1099/vir.0.010850-0"}], "href": "https://doi.org/10.1099/vir.0.010850-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19264640"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19264640"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Takayoshi Shirasaki, Masao Honda, Hideki Mizuno, et al. "}, {"type": "b", "children": [{"type": "t", "text": "La protein required for internal ribosome entry site-directed translation is a potential therapeutic target for hepatitis C virus replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Infect Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1086/653081"}], "href": "https://doi.org/10.1086/653081"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20497049"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20497049"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Surender Vashist, Deepika Bhullar, Sudhanshu Vrati "}, {"type": "b", "children": [{"type": "t", "text": "La protein can simultaneously bind to both 3'- and 5'-noncoding regions of Japanese encephalitis virus genome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "DNA Cell Biol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/dna.2010.1114"}], "href": "https://doi.org/10.1089/dna.2010.1114"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21294637"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21294637"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Upasana Ray, Saumitra Das "}, {"type": "b", "children": [{"type": "t", "text": "Interplay between NS3 protease and human La protein regulates translation-replication switch of Hepatitis C virus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep00001"}], "href": "https://doi.org/10.1038/srep00001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22355520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22355520"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Anuj Kumar, Upasana Ray, Saumitra Das "}, {"type": "b", "children": [{"type": "t", "text": "Human La protein interaction with GCAC near the initiator AUG enhances hepatitis C Virus RNA replication by promoting linkage between 5' and 3' untranslated regions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Virol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/JVI.00525-13"}], "href": "https://doi.org/10.1128/JVI.00525-13"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23552417"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23552417"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Shivaprasad Shwetha, Anuj Kumar, Ranajoy Mullick, et al. "}, {"type": "b", "children": [{"type": "t", "text": "HuR Displaces Polypyrimidine Tract Binding Protein To Facilitate La Binding to the 3' Untranslated Region and Enhances Hepatitis C Virus Replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Virol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/JVI.01714-15"}], "href": "https://doi.org/10.1128/JVI.01714-15"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26339049"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26339049"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Richard J Maraia, Sandy Mattijssen, Isabel Cruz-Gallardo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The La and related RNA-binding proteins (LARPs): structures, functions, and evolving perspectives."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Wiley Interdiscip Rev RNA (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/wrna.1430"}], "href": "https://doi.org/10.1002/wrna.1430"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28782243"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28782243"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Imke Ehlers, Sven Horke, Kerstin Reumann, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional characterization of the interaction between human La and hepatitis B virus RNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M402227200"}], "href": "https://doi.org/10.1074/jbc.M402227200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15302879"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15302879"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Aurélia Belisova, Katharina Semrad, Oliver Mayer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RNA chaperone activity of protein components of human Ro RNPs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "RNA (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1261/rna.7263905"}], "href": "https://doi.org/10.1261/rna.7263905"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15928345"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15928345"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Petra J Neufing, Robert M Clancy, Michael W Jackson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exposure and binding of selected immunodominant La/SSB epitopes on human apoptotic cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Rheum (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/art.21486"}], "href": "https://doi.org/10.1002/art.21486"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16320341"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16320341"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Robert M Clancy, Petra J Neufing, Ping Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired clearance of apoptotic cardiocytes is linked to anti-SSA/Ro and -SSB/La antibodies in the pathogenesis of congenital heart block."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI27803"}], "href": "https://doi.org/10.1172/JCI27803"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16906225"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16906225"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Fares Al-Ejeh, Jocelyn M Darby, Michael P Brown "}, {"type": "b", "children": [{"type": "t", "text": "The La autoantigen is a malignancy-associated cell death target that is induced by DNA-damaging drugs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Cancer Res (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1078-0432.CCR-07-0922"}], "href": "https://doi.org/10.1158/1078-0432.CCR-07-0922"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17875783"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17875783"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Antonio Brucato, Chiara Grava, Maria Bortolati, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Congenital heart block not associated with anti-Ro/La antibodies: comparison with anti-Ro/La-positive cases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Rheumatol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3899/jrheum.080737"}], "href": "https://doi.org/10.3899/jrheum.080737"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19567621"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19567621"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Alexander R Langley, Helen Chambers, Christo P Christov, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ribonucleoprotein particles containing non-coding Y RNAs, Ro60, La and nucleolin are not required for Y RNA function in DNA replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0013673"}], "href": "https://doi.org/10.1371/journal.pone.0013673"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21060685"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21060685"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "M Nakatake, B Monte-Mor, N Debili, et al. "}, {"type": "b", "children": [{"type": "t", "text": "JAK2(V617F) negatively regulates p53 stabilization by enhancing MDM2 via La expression in myeloproliferative neoplasms."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2011.313"}], "href": "https://doi.org/10.1038/onc.2011.313"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21785463"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21785463"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Luigi Martino, Simon Pennell, Geoff Kelly, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Analysis of the interaction with the hepatitis C virus mRNA reveals an alternative mode of RNA recognition by the human La protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkr890"}], "href": "https://doi.org/10.1093/nar/gkr890"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22009680"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22009680"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Ying Liu, Huiling Tan, Hui Tian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Autoantigen La promotes efficient RNAi, antiviral response, and transposon silencing by facilitating multiple-turnover RISC catalysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2011.09.011"}], "href": "https://doi.org/10.1016/j.molcel.2011.09.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22055194"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22055194"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "E J ter Borg, J C Kelder "}, {"type": "b", "children": [{"type": "t", "text": "Lower prevalence of extra-glandular manifestations and anti-SSB antibodies in patients with primary Sjögren's syndrome and widespread pain: evidence for a relatively benign subset."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Exp Rheumatol (2014)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24529195"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24529195"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Julia Kuehnert, Gunhild Sommer, Avery W Zierk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Novel RNA chaperone domain of RNA-binding protein La is regulated by AKT phosphorylation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gku1309"}], "href": "https://doi.org/10.1093/nar/gku1309"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25520193"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25520193"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "S Katsiougiannis, R Tenta, F N Skopouli "}, {"type": "b", "children": [{"type": "t", "text": "Endoplasmic reticulum stress causes autophagy and apoptosis leading to cellular redistribution of the autoantigens Ro/Sjögren's syndrome-related antigen A (SSA) and La/SSB in salivary gland epithelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Exp Immunol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/cei.12638"}], "href": "https://doi.org/10.1111/cei.12638"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25845745"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25845745"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Tilman Heise, Venkatesh Kota, Alexander Brock, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The La protein counteracts cisplatin-induced cell death by stimulating protein synthesis of anti-apoptotic factor Bcl2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.8819"}], "href": "https://doi.org/10.18632/oncotarget.8819"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27105491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27105491"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "Daniele Hasler, Gerhard Lehmann, Yasuhiro Murakawa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Lupus Autoantigen La Prevents Mis-channeling of tRNA Fragments into the Human MicroRNA Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2016.05.026"}], "href": "https://doi.org/10.1016/j.molcel.2016.05.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27345152"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27345152"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Kerene A Brown, Samel Sharifi, Rawaa Hussain, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Distinct Dynamic Modes Enable the Engagement of Dissimilar Ligands in a Promiscuous Atypical RNA Recognition Motif."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochemistry (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/acs.biochem.6b00995"}], "href": "https://doi.org/10.1021/acs.biochem.6b00995"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27959512"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27959512"}]}]}]}
|
| Synonyms | LA/SSB, LA, LARP3 |
| Proteins | LA_HUMAN |
| NCBI Gene ID | 6741 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
SSB has 8,659 functional associations with biological entities spanning 9 categories (molecular profile, organism, functional term, phrase or reference, chemical, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 121 datasets.
Click the + buttons to view associations for SSB from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Achilles Cell Line Gene Essentiality Profiles | cell lines with fitness changed by SSB gene knockdown relative to other cell lines from the Achilles Cell Line Gene Essentiality Profiles dataset. | |
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SSB gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles | tissues with high or low expression of SSB gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SSB gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of SSB gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of SSB gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SSB gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| Biocarta Pathways | pathways involving SSB protein from the Biocarta Pathways dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of SSB gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of SSB gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SSB gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with SSB protein from the CCLE Cell Line Proteomics dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with SSB gene from the CellMarker Gene-Cell Type Associations dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SSB gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SSB gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of SSB gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SSB gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing SSB protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing SSB protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing SSB protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with SSB protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SSB protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| CORUM Protein Complexes | protein complexs containing SSB protein from the CORUM Protein Complexes dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SSB gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with SSB gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Disease Associations | diseases associated with SSB gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DeepCoverMOA Drug Mechanisms of Action | small molecule perturbations with high or low expression of SSB protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with SSB gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SSB gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with SSB gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with SSB gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SSB gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SSB gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SSB gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing SSB from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GAD High Level Gene-Disease Associations | diseases associated with SSB gene in GWAS and other genetic association datasets from the GAD High Level Gene-Disease Associations dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with SSB gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing SSB from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of SSB gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving SSB gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving SSB gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving SSB gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing SSB protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing SSB protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing SSB protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by SSB gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by SSB gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by SSB gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of SSB gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SSB gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SSB gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SSB gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of SSB gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with SSB gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of SSB gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of SSB protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SSB gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for SSB from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with SSB gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for SSB protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of SSB gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of SSB gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SSB gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| KEA Substrates of Kinases | kinases that phosphorylate SSB protein from the curated KEA Substrates of Kinases dataset. | |
| Kinase Library Serine Threonine Kinome Atlas | kinases that phosphorylate SSB protein from the Kinase Library Serine Threonine Atlas dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SSB gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of SSB gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of SSB gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of SSB gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SSB gene from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain SSB protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by SSB gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting SSB gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SSB gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of SSB gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by SSB gene mutations from the MPO Gene-Phenotype Associations dataset. | |
| MSigDB Cancer Gene Co-expression Modules | co-expressed genes for SSB from the MSigDB Cancer Gene Co-expression Modules dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of SSB gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of SSB gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| NURSA Protein Complexes | protein complexs containing SSB protein recovered by IP-MS from the NURSA Protein Complexes dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for SSB from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SSB gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of SSB gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving SSB protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving SSB protein from the Wikipathways PFOCR 2024 dataset. | |
| Phosphosite Textmining Biological Term Annotations | biological terms co-occuring with SSB protein in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset. | |
| PhosphoSitePlus Substrates of Kinases | kinases that phosphorylate SSB protein from the curated PhosphoSitePlus Substrates of Kinases dataset. | |
| ProteomicsDB Cell Type and Tissue Protein Expression Profiles | cell types and tissues with high or low expression of SSB protein relative to other cell types and tissues from the ProteomicsDB Cell Type and Tissue Protein Expression Profiles dataset. | |
| Reactome Pathways 2014 | pathways involving SSB protein from the Reactome Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving SSB protein from the Reactome Pathways 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SSB gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SSB gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SSB gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of SSB gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SSB gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SSB gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SSB gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sanger Dependency Map Cancer Cell Line Proteomics | cell lines associated with SSB protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of SSB gene from the Sci-Plex Drug Perturbation Signatures dataset. | |
| SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs | drug perturbations changing phosphorylation of SSB protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs dataset. | |
| SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands | ligand (protein) perturbations changing phosphorylation of SSB protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of SSB gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of SSB gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SSB gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of SSB protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SSB protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of SSB protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SSB protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with SSB protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SSB protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2014 | pathways involving SSB protein from the Wikipathways Pathways 2014 dataset. | |