| HGNC Family | Tetratricopeptide repeat domain containing (TTC), U-box domain containing (UBOX) |
| Name | STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase |
| Description | This gene encodes a protein containing tetratricopeptide repeat and a U-box that functions as a ubiquitin ligase/cochaperone. The encoded protein binds to and ubiquitinates shock cognate 71 kDa protein (Hspa8) and DNA polymerase beta (Polb), among other targets. Mutations in this gene cause spinocerebellar ataxia, autosomal recessive 16. Alternative splicing results in multiple transcript variants. There is a pseudogene for this gene on chromosome 2. [provided by RefSeq, Jun 2014] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSTUB1, which encodes the chaperone‐associated E3 ubiquitin ligase CHIP, is a central regulator of protein homeostasis. By engaging with molecular chaperones such as Hsp70 and Hsp90, CHIP recognizes misfolded or damaged client proteins and tags them with ubiquitin for degradation by the proteasome. This quality–control mechanism, detailed in several studies, is fundamental to preventing the accumulation of toxic protein aggregates in cells."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the context of neurodegeneration, STUB1/CHIP plays a protective role by targeting aggregation‐prone proteins for elimination. Experimental evidence shows that CHIP promotes ubiquitination of hyperphosphorylated tau, ataxin–1, and α–synuclein, thereby reducing their accumulation and toxicity. This function is especially relevant to tauopathies and polyglutamine disorders, where aberrant protein aggregation is a hallmark of disease."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "8"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in proteostasis, STUB1/CHIP modulates multiple signaling pathways by controlling the levels of key regulatory proteins. CHIP targets receptors and transcription factors that govern cell growth and survival. For example, it regulates the turnover of ErbB2 and the androgen receptor by binding to conserved motifs in these proteins, directs the degradation of p53 via dual chaperone‐dependent mechanisms, and modulates TGF–β/Smad signaling. Additional CHIP substrates implicated in oncogenesis include LRRK2, PTEN, HDAC6, and c–Myc. Such multifaceted regulation underscores STUB1’s critical role in the dynamic balance of signal transduction pathways."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "24"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nUnder stress conditions, STUB1/CHIP contributes to adaptive responses by modulating factors involved in hypoxia and autophagy. It promotes the lysosomal degradation of HIF–1α and, in parallel, regulates the activity of TFEB—the master transcriptional regulator of autophagy and lysosome biogenesis—as well as the SUMO protease SENP3. By targeting these substrates, CHIP helps tailor cellular responses to stress such as oxygen deprivation or metabolic challenges."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "25", "end_ref": "28"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the immune system, STUB1/CHIP influences the balance between activation and suppression. Notably, CHIP mediates the ubiquitin–dependent degradation of Foxp3 in regulatory T cells during inflammatory stress and also participates in Toll–like receptor signaling by recruiting kinases that amplify immune responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "21"}, {"type": "fg_f", "ref": "29"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nPerturbations in STUB1 function have far–reaching pathological implications. Loss–of–function mutations in STUB1 have been linked to neurodegenerative syndromes such as Gordon Holmes syndrome and autosomal recessive cerebellar ataxia, while reduced CHIP expression is associated with enhanced tumor progression in colorectal cancer. Structural studies of CHIP’s TPR domain further illuminate how its regulatory interactions with chaperones are fine–tuned in both health and disease."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "30", "end_ref": "34"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional roles for STUB1/CHIP include the modulation of cell death pathways. For instance, CHIP has been shown to restrict necroptosis through the ubiquitination of RIPK3, thereby influencing the sensitivity of cells to TNF–induced programmed necrosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "35"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hideki Shimura, Daniel Schwartz, Steven P Gygi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP-Hsc70 complex ubiquitinates phosphorylated tau and enhances cell survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M305838200"}], "href": "https://doi.org/10.1074/jbc.M305838200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14612456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14612456"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Minghao Zhang, Mark Windheim, S Mark Roe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Chaperoned ubiquitylation--crystal structures of the CHIP U box E3 ubiquitin ligase and a CHIP-Ubc13-Uev1a complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2005.09.023"}], "href": "https://doi.org/10.1016/j.molcel.2005.09.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16307917"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16307917"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Meredith F N Rosser, Erin Washburn, Paul J Muchowski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Chaperone functions of the E3 ubiquitin ligase CHIP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M700513200"}], "href": "https://doi.org/10.1074/jbc.M700513200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17545168"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17545168"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Marta Stankiewicz, Rainer Nikolay, Vladimir Rybin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP participates in protein triage decisions by preferentially ubiquitinating Hsp70-bound substrates."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FEBS J (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1742-4658.2010.07737.x"}], "href": "https://doi.org/10.1111/j.1742-4658.2010.07737.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20618441"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20618441"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Leonard Petrucelli, Dennis Dickson, Kathryn Kehoe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP and Hsp70 regulate tau ubiquitination, degradation and aggregation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddh083"}], "href": "https://doi.org/10.1093/hmg/ddh083"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14962978"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14962978"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Naruhiko Sahara, Miyuki Murayama, Tatsuya Mizoroki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "In vivo evidence of CHIP up-regulation attenuating tau aggregation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurochem (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1471-4159.2005.03272.x"}], "href": "https://doi.org/10.1111/j.1471-4159.2005.03272.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16111477"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16111477"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ismael Al-Ramahi, Yung C Lam, Hung-Kai Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP protects from the neurotoxicity of expanded and wild-type ataxin-1 and promotes their ubiquitination and degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M601603200"}], "href": "https://doi.org/10.1074/jbc.M601603200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16831871"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16831871"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Chad A Dickey, Adeela Kamal, Karen Lundgren, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The high-affinity HSP90-CHIP complex recognizes and selectively degrades phosphorylated tau client proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI29715"}], "href": "https://doi.org/10.1172/JCI29715"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17304350"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17304350"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Julie E Tetzlaff, Preeti Putcha, Tiago F Outeiro, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP targets toxic alpha-Synuclein oligomers for degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M802283200"}], "href": "https://doi.org/10.1074/jbc.M802283200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18436529"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18436529"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Yoshihiro Morishima, Adrienne M Wang, Zhigang Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP deletion reveals functional redundancy of E3 ligases in promoting degradation of both signaling proteins and expanded glutamine proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddn296"}], "href": "https://doi.org/10.1093/hmg/ddn296"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18784277"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18784277"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Pengcheng Zhou, Norvin Fernandes, Ingrid L Dodge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ErbB2 degradation mediated by the co-chaperone protein CHIP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M209640200"}], "href": "https://doi.org/10.1074/jbc.M209640200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12574167"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12574167"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Linyu Li, Hong Xin, Xialian Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP mediates degradation of Smad proteins and potentially regulates Smad-induced transcription."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.24.2.856-864.2004"}], "href": "https://doi.org/10.1128/MCB.24.2.856-864.2004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14701756"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14701756"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Bin He, Suxia Bai, Andrew T Hnat, et al. "}, {"type": "b", "children": [{"type": "t", "text": "An androgen receptor NH2-terminal conserved motif interacts with the COOH terminus of the Hsp70-interacting protein (CHIP)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M403117200"}], "href": "https://doi.org/10.1074/jbc.M403117200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15107424"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15107424"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Simon Alberti, Karsten Böhse, Verena Arndt, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The cochaperone HspBP1 inhibits the CHIP ubiquitin ligase and stimulates the maturation of the cystic fibrosis transmembrane conductance regulator."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.e04-04-0293"}], "href": "https://doi.org/10.1091/mbc.e04-04-0293"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15215316"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15215316"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Hong Xin, Xialian Xu, Linyu Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP controls the sensitivity of transforming growth factor-beta signaling by modulating the basal level of Smad3 through ubiquitin-mediated degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M412275200"}], "href": "https://doi.org/10.1074/jbc.M412275200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15781469"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15781469"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Claudia Esser, Martin Scheffner, Jörg Höhfeld "}, {"type": "b", "children": [{"type": "t", "text": "The chaperone-associated ubiquitin ligase CHIP is able to target p53 for proteasomal degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M501574200"}], "href": "https://doi.org/10.1074/jbc.M501574200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15911628"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15911628"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Meiyun Fan, Annie Park, Kenneth P Nephew "}, {"type": "b", "children": [{"type": "t", "text": "CHIP (carboxyl terminus of Hsc70-interacting protein) promotes basal and geldanamycin-induced degradation of estrogen receptor-alpha."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Endocrinol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/me.2005-0111"}], "href": "https://doi.org/10.1210/me.2005-0111"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16037132"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16037132"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Xiaodong Ding, Matthew S Goldberg "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of LRRK2 stability by the E3 ubiquitin ligase CHIP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0005949"}], "href": "https://doi.org/10.1371/journal.pone.0005949"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19536328"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19536328"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Atsuhiko T Naito, Sho Okada, Tohru Minamino, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Promotion of CHIP-mediated p53 degradation protects the heart from ischemic injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.109.214346"}], "href": "https://doi.org/10.1161/CIRCRESAHA.109.214346"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20413784"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20413784"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Lorraine V Kalia, Suneil K Kalia, Hien Chau, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ubiquitinylation of α-synuclein by carboxyl terminus Hsp70-interacting protein (CHIP) is regulated by Bcl-2-associated athanogene 5 (BAG5)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0014695"}], "href": "https://doi.org/10.1371/journal.pone.0014695"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21358815"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21358815"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Mingjin Yang, Chen Wang, Xuhui Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "E3 ubiquitin ligase CHIP facilitates Toll-like receptor signaling by recruiting and polyubiquitinating Src and atypical PKC{zeta}."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20102667"}], "href": "https://doi.org/10.1084/jem.20102667"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21911421"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21911421"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Casey Cook, Tania F Gendron, Kristyn Scheffel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of HDAC6, a novel CHIP substrate, alleviates abnormal tau accumulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/dds125"}], "href": "https://doi.org/10.1093/hmg/dds125"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22492994"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22492994"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "I Paul, S F Ahmed, A Bhowmik, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The ubiquitin ligase CHIP regulates c-Myc stability and transcriptional activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2012.144"}], "href": "https://doi.org/10.1038/onc.2012.144"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22543587"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22543587"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "S Sarkar, D L Brautigan, S J Parsons, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Androgen receptor degradation by the E3 ligase CHIP modulates mitotic arrest in prostate cancer cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2012.561"}], "href": "https://doi.org/10.1038/onc.2012.561"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23246967"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23246967"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Weibo Luo, Jun Zhong, Ryan Chang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hsp70 and CHIP selectively mediate ubiquitination and degradation of hypoxia-inducible factor (HIF)-1alpha but Not HIF-2alpha."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.068577"}], "href": "https://doi.org/10.1074/jbc.M109.068577"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19940151"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19940151"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Shan Yan, Xuxu Sun, Binggang Xiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Redox regulation of the stability of the SUMO protease SENP3 via interactions with CHIP and Hsp90."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO J (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/emboj.2010.245"}], "href": "https://doi.org/10.1038/emboj.2010.245"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20924358"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20924358"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Carla Figueira Bento, Rosa Fernandes, José Ramalho, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The chaperone-dependent ubiquitin ligase CHIP targets HIF-1α for degradation in the presence of methylglyoxal."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0015062"}], "href": "https://doi.org/10.1371/journal.pone.0015062"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21124777"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21124777"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Youbao Sha, Lang Rao, Carmine Settembre, et al. "}, {"type": "b", "children": [{"type": "t", "text": "STUB1 regulates TFEB-induced autophagy-lysosome pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO J (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embj.201796699"}], "href": "https://doi.org/10.15252/embj.201796699"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28754656"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28754656"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Zuojia Chen, Joseph Barbi, Shurui Bu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The ubiquitin ligase Stub1 negatively modulates regulatory T cell suppressive activity by promoting degradation of the transcription factor Foxp3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunity (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.immuni.2013.08.006"}], "href": "https://doi.org/10.1016/j.immuni.2013.08.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23973223"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23973223"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Chang-He Shi, Jonathan C Schisler, Carrie E Rubel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ataxia and hypogonadism caused by the loss of ubiquitin ligase activity of the U box protein CHIP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddt497"}], "href": "https://doi.org/10.1093/hmg/ddt497"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24113144"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24113144"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Yangmeng Wang, Fangli Ren, Yinyin Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP/Stub1 functions as a tumor suppressor and represses NF-κB-mediated signaling in colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgt393"}], "href": "https://doi.org/10.1093/carcin/bgt393"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24302614"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24302614"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Yuting Shi, Junling Wang, Jia-Da Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of CHIP as a novel causative gene for autosomal recessive cerebellar ataxia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0081884"}], "href": "https://doi.org/10.1371/journal.pone.0081884"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24312598"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24312598"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Arnaud Millet, Katherine R Martin, Francis Bonnefoy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Proteinase 3 on apoptotic cells disrupts immune silencing in autoimmune vasculitis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI78182"}], "href": "https://doi.org/10.1172/JCI78182"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26436651"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26436651"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "David Genis, Sara Ortega-Cubero, Hector San Nicolás, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Heterozygous "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "STUB1"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " mutation causes familial ataxia with cognitive affective syndrome (SCA48)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurology (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1212/WNL.0000000000006550"}], "href": "https://doi.org/10.1212/WNL.0000000000006550"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30381368"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30381368"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Jinho Seo, Eun-Woo Lee, Hyerim Sung, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHIP controls necroptosis through ubiquitylation- and lysosome-dependent degradation of RIPK3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Cell Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncb3314"}], "href": "https://doi.org/10.1038/ncb3314"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26900751"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26900751"}]}]}]}
|
| Synonyms | CHIP, SCAR16, HSPABP2, SDCCAG7, UBOX1, NY-CO-7 |
| Proteins | CHIP_HUMAN |
| NCBI Gene ID | 10273 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
STUB1 has 11,659 functional associations with biological entities spanning 8 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 130 datasets.
Click the + buttons to view associations for STUB1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of STUB1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles | tissues with high or low expression of STUB1 gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of STUB1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of STUB1 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of STUB1 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of STUB1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of STUB1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with STUB1 protein from the CCLE Cell Line Proteomics dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of STUB1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of STUB1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of STUB1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| ClinVar Gene-Phenotype Associations 2025 | phenotypes associated with STUB1 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of STUB1 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing STUB1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing STUB1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing STUB1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 | cellular components containing STUB1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with STUB1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with STUB1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| CORUM Protein Complexes | protein complexs containing STUB1 protein from the CORUM Protein Complexes dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of STUB1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with STUB1 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with STUB1 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| CTD Gene-Disease Associations | diseases associated with STUB1 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DeepCoverMOA Drug Mechanisms of Action | small molecule perturbations with high or low expression of STUB1 protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by STUB1 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores | diseases involving STUB1 gene from the DISEASES Curated Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores 2025 | diseases involving STUB1 gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with STUB1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with STUB1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with STUB1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with STUB1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with STUB1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at STUB1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of STUB1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of STUB1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing STUB1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with STUB1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing STUB1 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of STUB1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving STUB1 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving STUB1 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving STUB1 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing STUB1 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing STUB1 protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing STUB1 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by STUB1 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by STUB1 gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by STUB1 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of STUB1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of STUB1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with STUB1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HMDB Metabolites of Enzymes | interacting metabolites for STUB1 protein from the curated HMDB Metabolites of Enzymes dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of STUB1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of STUB1 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| HPO Gene-Disease Associations | phenotypes associated with STUB1 gene by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for STUB1 from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with STUB1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for STUB1 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of STUB1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of STUB1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of STUB1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| KEA Substrates of Kinases | kinases that phosphorylate STUB1 protein from the curated KEA Substrates of Kinases dataset. | |
| KEGG Pathways 2026 | pathways involving STUB1 protein from the KEGG Pathways 2026 dataset. | |
| Kinase Library Serine Threonine Kinome Atlas | kinases that phosphorylate STUB1 protein from the Kinase Library Serine Threonine Atlas dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of STUB1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of STUB1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with STUB1 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of STUB1 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of STUB1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of STUB1 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of STUB1 gene from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| LOCATE Curated Protein Localization Annotations | cellular components containing STUB1 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain STUB1 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by STUB1 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting STUB1 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of STUB1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by STUB1 gene mutations from the MPO Gene-Phenotype Associations dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of STUB1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of STUB1 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| NURSA Protein Complexes | protein complexs containing STUB1 protein recovered by IP-MS from the NURSA Protein Complexes dataset. | |
| OMIM Gene-Disease Associations | phenotypes associated with STUB1 gene from the curated OMIM Gene-Disease Associations dataset. | |
| PANTHER Pathways | pathways involving STUB1 protein from the PANTHER Pathways dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for STUB1 from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of STUB1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of STUB1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving STUB1 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving STUB1 protein from the Wikipathways PFOCR 2024 dataset. | |
| PID Pathways | pathways involving STUB1 protein from the PID Pathways dataset. | |
| ProteomicsDB Cell Type and Tissue Protein Expression Profiles | cell types and tissues with high or low expression of STUB1 protein relative to other cell types and tissues from the ProteomicsDB Cell Type and Tissue Protein Expression Profiles dataset. | |
| Reactome Pathways 2014 | pathways involving STUB1 protein from the Reactome Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving STUB1 protein from the Reactome Pathways 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of STUB1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of STUB1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of STUB1 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of STUB1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of STUB1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at STUB1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of STUB1 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of STUB1 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sanger Dependency Map Cancer Cell Line Proteomics | cell lines associated with STUB1 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of STUB1 gene from the Sci-Plex Drug Perturbation Signatures dataset. | |
| SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs | drug perturbations changing phosphorylation of STUB1 protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs dataset. | |
| SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands | ligand (protein) perturbations changing phosphorylation of STUB1 protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of STUB1 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of STUB1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of STUB1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of STUB1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of STUB1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of STUB1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of STUB1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with STUB1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with STUB1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2014 | pathways involving STUB1 protein from the Wikipathways Pathways 2014 dataset. | |
| WikiPathways Pathways 2024 | pathways involving STUB1 protein from the WikiPathways Pathways 2024 dataset. | |