| Name | TEX13 family member D |
| Description | Predicted to enable mRNA binding activity. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough the request mentions TEX13D, none of the provided abstracts discuss TEX13D. Instead, these studies focus on DNA repair enzymes that counteract alkylation‐ and inflammation‐induced DNA damage. In one study, primary mouse embryonic fibroblasts lacking either Alkbh2 or Alkbh3 were shown to be approximately twofold more sensitive to the methylating agent MMS. In these cells, although both enzymes protect against MMS-induced cytotoxicity, only the deficiency of Alkbh2 resulted in a significant increase in mutation frequency, highlighting Alkbh2’s distinct role in preserving DNA fidelity following alkylation damage."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAnother study used chemically induced models of colitis and colon cancer in mice to reveal that inflammation-associated DNA lesions—specifically etheno-adducts induced by reactive oxygen and nitrogen species—are efficiently repaired not only by the alkyl adenine DNA glycosylase (AAG) but also by Alkbh2 and Alkbh3. Notably, the deficiency of all three repair enzymes resulted in a massively synergistic phenotype, underscoring their collective importance in protecting against inflammation-mediated carcinogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA further investigation focused on the repair of specific alkylated thymidine lesions. Using nonreplicative double-stranded vectors containing site-specific lesions, the authors demonstrated that among several types of lesions examined (including N3-ethylthymidine), only N3-EtdT was efficiently repaired by both Alkbh2 and Alkbh3. This study was further supported by in vitro evidence showing the direct reversal of N3-EtdT by purified human Alkbh2, thereby providing key insights into the substrate specificity of these DNA repair enzymes in mammalian cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Stephanie L Nay, Dong-Hyun Lee, Steven E Bates, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Alkbh2 protects against lethality and mutation in primary mouse embryonic fibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "DNA Repair (Amst) (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.dnarep.2012.02.005"}], "href": "https://doi.org/10.1016/j.dnarep.2012.02.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22429847"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22429847"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jennifer A Calvo, Lisiane B Meira, Chun-Yue I Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNA repair is indispensable for survival after acute inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI63338"}], "href": "https://doi.org/10.1172/JCI63338"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22684101"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22684101"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Changjun You, Pengcheng Wang, Stephanie L Nay, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Roles of Aag, Alkbh2, and Alkbh3 in the Repair of Carboxymethylated and Ethylated Thymidine Lesions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "ACS Chem Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/acschembio.6b00085"}], "href": "https://doi.org/10.1021/acschembio.6b00085"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26930515"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26930515"}]}]}]}
|
| NCBI Gene ID | 100132015 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
TEX13D has 431 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 13 datasets.
Click the + buttons to view associations for TEX13D from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of TEX13D gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with TEX13D protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with TEX13D gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by TEX13D gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of TEX13D gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of TEX13D gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| HuBMAP Azimuth Cell Type Annotations | cell types associated with TEX13D gene from the HuBMAP Azimuth Cell Type Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of TEX13D gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of TEX13D gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of TEX13D gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of TEX13D gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of TEX13D gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with TEX13D protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |