| Name | TNF receptor-associated factor 1 |
| Description | The protein encoded by this gene is a member of the TNF receptor (TNFR) associated factor (TRAF) protein family. TRAF proteins associate with, and mediate the signal transduction from various receptors of the TNFR superfamily. This protein and TRAF2 form a heterodimeric complex, which is required for TNF-alpha-mediated activation of MAPK8/JNK and NF-kappaB. The protein complex formed by this protein and TRAF2 also interacts with inhibitor-of-apoptosis proteins (IAPs), and thus mediates the anti-apoptotic signals from TNF receptors. The expression of this protein can be induced by Epstein-Barr virus (EBV). EBV infection membrane protein 1 (LMP1) is found to interact with this and other TRAF proteins; this interaction is thought to link LMP1-mediated B lymphocyte transformation to the signal transduction from TNFR family receptors. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2010] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nTRAF1 is a critical signaling adaptor that modulates immune receptor pathways by assembling into multiprotein complexes downstream of tumor necrosis factor receptors, CD40, 4–1BB, and even viral proteins such as Epstein–Barr virus LMP1. In these contexts, TRAF1 forms heterotrimers with TRAF2 and helps recruit ubiquitin ligases—most notably the cellular inhibitors of apoptosis (cIAP1/2) and the linear ubiquitin chain assembly complex (LUBAC)—to fine‐tune both the canonical and noncanonical NF‑κB as well as MAP kinase pathways. Consequently, TRAF1 plays an important role in regulating cell survival and T‑cell responses during chronic infection and inflammation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the arena of autoimmune and inflammatory diseases—including rheumatoid arthritis, systemic lupus erythematosus, and juvenile idiopathic arthritis—multiple genetic studies have identified the TRAF1/C5 locus as a modest risk factor. Altered expression levels of TRAF1 have been linked to the regulation of pro‐inflammatory signals in macrophages and other immune cells, where it influences NF‑κB activation, cytokine production, and ultimately disease progression. These genetic and functional findings reinforce the view that TRAF1 exerts a multifaceted control over inflammatory responses and autoimmunity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "12", "end_ref": "30"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMoreover, dysregulation of TRAF1 is observed in diverse pathological settings, including cancers and metabolic disorders. Overexpression of TRAF1 in B‑cell malignancies such as Hodgkin’s lymphoma and in fusion oncoproteins (e.g. TRAF1-ALK) is associated with enhanced survival signaling and resistance to apoptosis, while abnormal TRAF1 activity has also been implicated in conditions like hepatic steatosis and inflammatory bowel disease. Structural and epigenetic studies have further illuminated how TRAF1’s conformational features and promoter methylation contribute to both its positive and negative regulation of NF‑κB and MAP kinase pathways, highlighting its potential as a therapeutic target in a broad range of human diseases."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "31", "end_ref": "41"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Frank Henkler, Bernd Baumann, Mariola Fotin-Mleczek, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Caspase-mediated cleavage converts the tumor necrosis factor (TNF) receptor-associated factor (TRAF)-1 from a selective modulator of TNF receptor signaling to a general inhibitor of NF-kappaB activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M211090200"}], "href": "https://doi.org/10.1074/jbc.M211090200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12709429"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12709429"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Mariola Fotin-Mleczek, Frank Henkler, Angelika Hausser, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumor necrosis factor receptor-associated factor (TRAF) 1 regulates CD40-induced TRAF2-mediated NF-kappaB activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M310969200"}], "href": "https://doi.org/10.1074/jbc.M310969200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14557256"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14557256"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaofu Wang, Qingding Wang, Wanqin Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of phorbol ester-mediated TRAF1 induction in human colon cancer cells through a PKC/RAF/ERK/NF-kappaB-dependent pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.onc.1207312"}], "href": "https://doi.org/10.1038/sj.onc.1207312"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14981539"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14981539"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Tomohisa Kato, Yusuke Gotoh, Alexander Hoffmann, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Negative regulation of constitutive NF-kappaB and JNK signaling by PKN1-mediated phosphorylation of TRAF1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Cells (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1365-2443.2008.01182.x"}], "href": "https://doi.org/10.1111/j.1365-2443.2008.01182.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18429822"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18429822"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "A Wicovsky, F Henkler, S Salzmann, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumor necrosis factor receptor-associated factor-1 enhances proinflammatory TNF receptor-2 signaling and modifies TNFR1-TNFR2 cooperation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2009.29"}], "href": "https://doi.org/10.1038/onc.2009.29"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19287455"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19287455"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Chao Zheng, Venkataraman Kabaleeswaran, Yaya Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Crystal structures of the TRAF2: cIAP2 and the TRAF1: TRAF2: cIAP2 complexes: affinity, specificity, and regulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2010.03.009"}], "href": "https://doi.org/10.1016/j.molcel.2010.03.009"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20385093"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20385093"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Chao Wang, Ann J McPherson, R Brad Jones, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of the signaling adaptor TRAF1 causes CD8+ T cell dysregulation during human and murine chronic infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20110675"}], "href": "https://doi.org/10.1084/jem.20110675"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22184633"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22184633"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Sanjeev Choudhary, Mridul Kalita, Ling Fang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inducible tumor necrosis factor (TNF) receptor-associated factor-1 expression couples the canonical to the non-canonical NF-κB pathway in TNF stimulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.464081"}], "href": "https://doi.org/10.1074/jbc.M113.464081"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23543740"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23543740"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Hannah Greenfeld, Kaoru Takasaki, Michael J Walsh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRAF1 Coordinates Polyubiquitin Signaling to Enhance Epstein-Barr Virus LMP1-Mediated Growth and Survival Pathway Activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Pathog (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.ppat.1004890"}], "href": "https://doi.org/10.1371/journal.ppat.1004890"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25996949"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25996949"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Chang Min Kim, Jae Young Choi, Eijaz Ahmed Bhat, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Crystal structure of TRAF1 TRAF domain and its implications in the TRAF1-mediated intracellular signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep25526"}], "href": "https://doi.org/10.1038/srep25526"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27151821"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27151821"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Ali A Abdul-Sater, Maria I Edilova, Derek L Clouthier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The signaling adaptor TRAF1 negatively regulates Toll-like receptor signaling and this underlies its role in rheumatic disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Immunol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ni.3618"}], "href": "https://doi.org/10.1038/ni.3618"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27893701"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27893701"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Robert M Plenge, Mark Seielstad, Leonid Padyukov, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "N Engl J Med (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1056/NEJMoa073491"}], "href": "https://doi.org/10.1056/NEJMoa073491"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17804836"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17804836"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Fina A S Kurreeman, Leonid Padyukov, Rute B Marques, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A candidate gene approach identifies the TRAF1/C5 region as a risk factor for rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Med (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pmed.0040278"}], "href": "https://doi.org/10.1371/journal.pmed.0040278"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17880261"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17880261"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Anne Barton, Wendy Thomson, Xiayi Ke, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Re-evaluation of putative rheumatoid arthritis susceptibility genes in the post-genome wide association study era and hypothesis of a key pathway underlying susceptibility."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddn128"}], "href": "https://doi.org/10.1093/hmg/ddn128"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18434327"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18434327"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Maria I Zervou, Prodromos Sidiropoulos, Eleni Petraki, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association of a TRAF1 and a STAT4 gene polymorphism with increased risk for rheumatoid arthritis in a genetically homogeneous population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Immunol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.humimm.2008.06.006"}], "href": "https://doi.org/10.1016/j.humimm.2008.06.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18625278"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18625278"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Soumya Raychaudhuri, Elaine F Remmers, Annette T Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Common variants at CD40 and other loci confer risk of rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.233"}], "href": "https://doi.org/10.1038/ng.233"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18794853"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18794853"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "E Y M G Fung, D J Smyth, J M M Howson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Analysis of 17 autoimmune disease-associated variants in type 1 diabetes identifies 6q23/TNFAIP3 as a susceptibility locus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Immun (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/gene.2008.99"}], "href": "https://doi.org/10.1038/gene.2008.99"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19110536"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19110536"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Vasileios F Panoulas, Jacqueline P Smith, Peter Nightingale, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association of the TRAF1/C5 locus with increased mortality, particularly from malignancy or sepsis, in patients with rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Rheum (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/art.24176"}], "href": "https://doi.org/10.1002/art.24176"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19116907"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19116907"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Hye-Soon Lee, Benjamin D Korman, Julie M Le, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Rheum (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/art.24245"}], "href": "https://doi.org/10.1002/art.24245"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19180477"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19180477"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "K Nishimoto, Y Kochi, K Ikari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association study of TRAF1-C5 polymorphisms with susceptibility to rheumatoid arthritis and systemic lupus erythematosus in Japanese."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2008.104315"}], "href": "https://doi.org/10.1136/ard.2008.104315"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19336421"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19336421"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Sampath Prahalad, Sterling Hansen, April Whiting, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Variants in TNFAIP3, STAT4, and C12orf30 loci associated with multiple autoimmune diseases are also associated with juvenile idiopathic arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Rheum (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/art.24618"}], "href": "https://doi.org/10.1002/art.24618"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19565500"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19565500"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Eduardo J Folco, Viviane Z Rocha, Marco López-Ilasaca, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Adiponectin inhibits pro-inflammatory signaling in human macrophages independent of interleukin-10."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.019786"}], "href": "https://doi.org/10.1074/jbc.M109.019786"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19617629"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19617629"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Elizabeth W Karlson, Lori B Chibnik, Peter Kraft, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cumulative association of 22 genetic variants with seropositive rheumatoid arthritis risk."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2009.120170"}], "href": "https://doi.org/10.1136/ard.2009.120170"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20233754"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20233754"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Ann W Morgan, James I Robinson, Philip G Conaghan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Evaluation of the rheumatoid arthritis susceptibility loci HLA-DRB1, PTPN22, OLIG3/TNFAIP3, STAT4 and TRAF1/C5 in an inception cohort."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Res Ther (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/ar2969"}], "href": "https://doi.org/10.1186/ar2969"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20353580"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20353580"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Annette H M van der Helm-van Mil, René E M Toes, Tom W J Huizinga "}, {"type": "b", "children": [{"type": "t", "text": "Genetic variants in the prediction of rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2009.123828"}], "href": "https://doi.org/10.1136/ard.2009.123828"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20439292"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20439292"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Rachael J L Tan, Laura J Gibbons, Catherine Potter, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Investigation of rheumatoid arthritis susceptibility genes identifies association of AFF3 and CD226 variants with response to anti-tumour necrosis factor treatment."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2009.118406"}], "href": "https://doi.org/10.1136/ard.2009.118406"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20444755"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20444755"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Darren Plant, Edward Flynn, Hamdi Mbarek, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Investigation of potential non-HLA rheumatoid arthritis susceptibility loci in a European cohort increases the evidence for nine markers."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2009.121020"}], "href": "https://doi.org/10.1136/ard.2009.121020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20498205"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20498205"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Johanna Sundqvist, Henrik Falconer, Maria Seddighzadeh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Endometriosis and autoimmune disease: association of susceptibility to moderate/severe endometriosis with CCL21 and HLA-DRB1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Fertil Steril (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.fertnstert.2010.07.1060"}], "href": "https://doi.org/10.1016/j.fertnstert.2010.07.1060"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20797713"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20797713"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Maria I Zervou, Vassilios M Vazgiourakis, Neslihan Yilmaz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRAF1/C5, eNOS, C1q, but not STAT4 and PTPN22 gene polymorphisms are associated with genetic susceptibility to systemic lupus erythematosus in Turkey."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Immunol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.humimm.2011.09.003"}], "href": "https://doi.org/10.1016/j.humimm.2011.09.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21968398"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21968398"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Hanna W van Steenbergen, Luis Rodríguez-Rodríguez, Ewa Berglin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A genetic study on C5-TRAF1 and progression of joint damage in rheumatoid arthritis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arthritis Res Ther (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13075-014-0514-0"}], "href": "https://doi.org/10.1186/s13075-014-0514-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25566937"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25566937"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Gerd Munzert, Dieter Kirchner, Heike Stobbe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tumor necrosis factor receptor-associated factor 1 gene overexpression in B-cell chronic lymphocytic leukemia: analysis of NF-kappa B/Rel-regulated inhibitors of apoptosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood.V100.10.3749"}], "href": "https://doi.org/10.1182/blood.V100.10.3749"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12411322"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12411322"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Alfredo Conti, M'Hammed Ageunnouz, Domenico La Torre, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of the tumor necrosis factor receptor-associated factors 1 and 2 and regulation of the nuclear factor-kappaB antiapoptotic activity in human gliomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosurg (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3171/jns.2005.103.5.0873"}], "href": "https://doi.org/10.3171/jns.2005.103.5.0873"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16304992"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16304992"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Eugene Varfolomeev, Sarah M Wayson, Vishva M Dixit, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The inhibitor of apoptosis protein fusion c-IAP2.MALT1 stimulates NF-kappaB activation independently of TRAF1 AND TRAF2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M605116200"}], "href": "https://doi.org/10.1074/jbc.M605116200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16891304"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16891304"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Fina A S Kurreeman, George N Goulielmos, Behrooz Z Alizadeh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The TRAF1-C5 region on chromosome 9q33 is associated with multiple autoimmune diseases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Rheum Dis (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/ard.2008.106567"}], "href": "https://doi.org/10.1136/ard.2008.106567"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19433411"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19433411"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Feng Guo, Aining Sun, Wenjuan Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRAF1 is involved in the classical NF-kappaB activation and CD30-induced alternative activity in Hodgkin's lymphoma cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Immunol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molimm.2009.05.178"}], "href": "https://doi.org/10.1016/j.molimm.2009.05.178"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19540595"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19540595"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "F Abate, M Todaro, J-A van der Krogt, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel patient-derived tumorgraft model with TRAF1-ALK anaplastic large-cell lymphoma translocation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Leukemia (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/leu.2014.347"}], "href": "https://doi.org/10.1038/leu.2014.347"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25533804"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25533804"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Mei Xiang, Pi-Xiao Wang, Ai-Bing Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Targeting hepatic TRAF1-ASK1 signaling to improve inflammation, insulin resistance, and hepatic steatosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hepatol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jhep.2016.02.002"}], "href": "https://doi.org/10.1016/j.jhep.2016.02.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26860405"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26860405"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "Maria I Edilova, Ali A Abdul-Sater, Tania H Watts "}, {"type": "b", "children": [{"type": "t", "text": "TRAF1 Signaling in Human Health and Disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Immunol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fimmu.2018.02969"}], "href": "https://doi.org/10.3389/fimmu.2018.02969"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30619326"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30619326"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Yuanlei Chen, Zeyi Lu, Chao Qi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "N"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "6"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": "-methyladenosine-modified TRAF1 promotes sunitinib resistance by regulating apoptosis and angiogenesis in a METTL14-dependent manner in renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12943-022-01549-1"}], "href": "https://doi.org/10.1186/s12943-022-01549-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35538475"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35538475"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "Yu Qi Qiao, Jun Shen, Yan Gu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Gene expression of tumor necrosis factor receptor associated-factor (TRAF)-1 and TRAF-2 in inflammatory bowel disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Dig Dis (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/1751-2980.12044"}], "href": "https://doi.org/10.1111/1751-2980.12044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23414308"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23414308"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Romain Pacaud, Quentin Sery, Lisa Oliver, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNMT3L interacts with transcription factors to target DNMT3L/DNMT3B to specific DNA sequences: role of the DNMT3L/DNMT3B/p65-NFκB complex in the (de-)methylation of TRAF1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochimie (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biochi.2014.05.005"}], "href": "https://doi.org/10.1016/j.biochi.2014.05.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24952347"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24952347"}]}]}]}
|
| Synonyms | MGC:10353, EBI6 |
| Proteins | TRAF1_HUMAN |
| NCBI Gene ID | 7185 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
TRAF1 has 7,923 functional associations with biological entities spanning 9 categories (molecular profile, organism, functional term, phrase or reference, chemical, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 128 datasets.
Click the + buttons to view associations for TRAF1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Achilles Cell Line Gene Essentiality Profiles | cell lines with fitness changed by TRAF1 gene knockdown relative to other cell lines from the Achilles Cell Line Gene Essentiality Profiles dataset. | |
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of TRAF1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles | tissues with high or low expression of TRAF1 gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of TRAF1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| Biocarta Pathways | pathways involving TRAF1 protein from the Biocarta Pathways dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TRAF1 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TRAF1 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of TRAF1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of TRAF1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with TRAF1 gene from the CellMarker Gene-Cell Type Associations dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TRAF1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of TRAF1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of TRAF1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TRAF1 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing TRAF1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing TRAF1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with TRAF1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with TRAF1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of TRAF1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with TRAF1 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with TRAF1 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| CTD Gene-Disease Associations | diseases associated with TRAF1 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| dbGAP Gene-Trait Associations | traits associated with TRAF1 gene in GWAS and other genetic association datasets from the dbGAP Gene-Trait Associations dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by TRAF1 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores | diseases involving TRAF1 gene from the DISEASES Curated Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores 2025 | diseases involving TRAF1 gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores | diseases associated with TRAF1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with TRAF1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with TRAF1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with TRAF1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with TRAF1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with TRAF1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at TRAF1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TRAF1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of TRAF1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing TRAF1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GAD Gene-Disease Associations | diseases associated with TRAF1 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset. | |
| GAD High Level Gene-Disease Associations | diseases associated with TRAF1 gene in GWAS and other genetic association datasets from the GAD High Level Gene-Disease Associations dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with TRAF1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing TRAF1 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of TRAF1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving TRAF1 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving TRAF1 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving TRAF1 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing TRAF1 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing TRAF1 protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by TRAF1 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by TRAF1 gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by TRAF1 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of TRAF1 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of TRAF1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of TRAF1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations | phenotypes associated with TRAF1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with TRAF1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with TRAF1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with TRAF1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of TRAF1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of TRAF1 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for TRAF1 from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with TRAF1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for TRAF1 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of TRAF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of TRAF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of TRAF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| KEA Substrates of Kinases | kinases that phosphorylate TRAF1 protein from the curated KEA Substrates of Kinases dataset. | |
| KEGG Pathways | pathways involving TRAF1 protein from the KEGG Pathways dataset. | |
| KEGG Pathways 2026 | pathways involving TRAF1 protein from the KEGG Pathways 2026 dataset. | |
| Kinase Library Serine Threonine Kinome Atlas | kinases that phosphorylate TRAF1 protein from the Kinase Library Serine Threonine Atlas dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of TRAF1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of TRAF1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with TRAF1 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of TRAF1 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of TRAF1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of TRAF1 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TRAF1 gene from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain TRAF1 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by TRAF1 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting TRAF1 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by TRAF1 gene mutations from the MPO Gene-Phenotype Associations dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of TRAF1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of TRAF1 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| NURSA Protein Complexes | protein complexs containing TRAF1 protein recovered by IP-MS from the NURSA Protein Complexes dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for TRAF1 from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of TRAF1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of TRAF1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving TRAF1 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving TRAF1 protein from the Wikipathways PFOCR 2024 dataset. | |
| Phosphosite Textmining Biological Term Annotations | biological terms co-occuring with TRAF1 protein in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset. | |
| PhosphoSitePlus Substrates of Kinases | kinases that phosphorylate TRAF1 protein from the curated PhosphoSitePlus Substrates of Kinases dataset. | |
| PID Pathways | pathways involving TRAF1 protein from the PID Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving TRAF1 protein from the Reactome Pathways 2024 dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of TRAF1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TRAF1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at TRAF1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of TRAF1 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of TRAF1 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sanger Dependency Map Cancer Cell Line Proteomics | cell lines associated with TRAF1 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset. | |
| Tabula Sapiens Gene-Cell Associations | cell types with high or low expression of TRAF1 gene relative to other cell types from the Tabula Sapiens Gene-Cell Associations dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of TRAF1 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of TRAF1 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of TRAF1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of TRAF1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of TRAF1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of TRAF1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of TRAF1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with TRAF1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with TRAF1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| Virus MINT Protein-Viral Protein Interactions | interacting viral proteins for TRAF1 from the Virus MINT Protein-Viral Protein Interactions dataset. | |
| Virus MINT Protein-Virus Interactions | viruses interacting with TRAF1 from the Virus MINT Protein-Virus Interactions dataset. | |
| WikiPathways Pathways 2014 | pathways involving TRAF1 protein from the Wikipathways Pathways 2014 dataset. | |
| WikiPathways Pathways 2024 | pathways involving TRAF1 protein from the WikiPathways Pathways 2024 dataset. | |