| HGNC Family | Parkinson disease associated genes (PARK) |
| Name | vacuolar protein sorting 35 homolog (S. cerevisiae) |
| Description | This gene belongs to a group of vacuolar protein sorting (VPS) genes. The encoded protein is a component of a large multimeric complex, termed the retromer complex, involved in retrograde transport of proteins from endosomes to the trans-Golgi network. The close structural similarity between the yeast and human proteins that make up this complex suggests a similarity in function. Expression studies in yeast and mammalian cells indicate that this protein interacts directly with VPS35, which serves as the core of the retromer complex. [provided by RefSeq, Jul 2008] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nVPS35 is a core component of the retromer complex that orchestrates the retrieval and recycling of transmembrane proteins from endosomes back to the trans‐Golgi network and plasma membrane. Acting as a scaffold within the cargo‐recognition trimer (with VPS26 and VPS29), VPS35 adopts a horseshoe‑shaped α‑helical solenoid structure that organizes multiple binding interfaces for cargo proteins, sorting nexins, and regulatory factors such as Rab7 and the actin‐nucleating WASH complex. This assembly underlies fundamental processes including the endosome‐to‑Golgi transport of receptors like the cation‑independent mannose‑6‑phosphate receptor and DMT1, as well as trafficking linked to mitochondria‐derived vesicles."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nPerturbations of VPS35 function—most notably through pathogenic missense mutations such as D620N—are implicated in neurodegenerative disorders, particularly Parkinson’s disease. In affected neurons, VPS35 mutations disrupt its association with regulators (for example, the WASH complex), impairing the formation of transport carriers and leading to altered endosomal morphology. Such defects compromise the recycling and trafficking of critical cargoes, result in abnormal dopamine receptor and mitochondrial protein handling, and enhance LRRK2 kinase activity, thereby contributing to mitochondrial fragmentation, defective autophagy, and ultimately neurodegeneration. Genetic and cellular analyses in patient‐derived cells, animal models, and even Drosophila have underscored that VPS35 dysfunction not only perturbs endosome–TGN trafficking but also adversely affects synaptic transmission and receptor recycling, thereby amplifying neuronal vulnerability."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "10", "end_ref": "36"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its classical role in endosomal recycling, VPS35 exerts diverse functions in other cellular contexts. It regulates the trafficking of viral envelope glycoproteins—as exemplified by its role in HIV‐1 Env incorporation into virions—and modulates signaling pathways via interactions with Ras and type‑I interferon receptors, thereby influencing MAPK and JAK/STAT signals. Moreover, altered VPS35 expression and mutations have been linked to oncogenic processes in hepatocellular carcinoma and to motor neuron degeneration in amyotrophic lateral sclerosis, underscoring its broader relevance to cellular homeostasis and disease pathogenesis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "37", "end_ref": "43"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Raul Rojas, Satoshi Kametaka, Carol R Haft, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Interchangeable but essential functions of SNX1 and SNX2 in the association of retromer with endosomes and the trafficking of mannose 6-phosphate receptors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.00156-06"}], "href": "https://doi.org/10.1128/MCB.00156-06"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17101778"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17101778"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Aitor Hierro, Adriana L Rojas, Raul Rojas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional architecture of the retromer cargo-recognition complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature06216"}], "href": "https://doi.org/10.1038/nature06216"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17891154"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17891154"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Matthew N J Seaman, Michael E Harbour, Daniel Tattersall, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Membrane recruitment of the cargo-selective retromer subcomplex is catalysed by the small GTPase Rab7 and inhibited by the Rab-GAP TBC1D5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.048686"}], "href": "https://doi.org/10.1242/jcs.048686"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19531583"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19531583"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Mitsuaki Tabuchi, Izumi Yanatori, Yasuhiro Kawai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer-mediated direct sorting is required for proper endosomal recycling of the mammalian iron transporter DMT1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.060574"}], "href": "https://doi.org/10.1242/jcs.060574"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20164305"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20164305"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Emélie Braschi, Vanessa Goyon, Rodolfo Zunino, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Vps35 mediates vesicle transport between the mitochondria and peroxisomes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Biol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cub.2010.05.066"}], "href": "https://doi.org/10.1016/j.cub.2010.05.066"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20619655"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20619655"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Da Jia, Timothy S Gomez, Daniel D Billadeau, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Multiple repeat elements within the FAM21 tail link the WASH actin regulatory complex to the retromer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.E11-12-1059"}], "href": "https://doi.org/10.1091/mbc.E11-12-1059"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22513087"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22513087"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jordan Follett, Suzanne J Norwood, Nicholas A Hamilton, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Vps35 D620N mutation linked to Parkinson's disease disrupts the cargo sorting function of retromer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Traffic (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/tra.12136"}], "href": "https://doi.org/10.1111/tra.12136"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24152121"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24152121"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Amulya Priya, Inna V Kalaidzidis, Yannis Kalaidzidis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular insights into Rab7-mediated endosomal recruitment of core retromer: deciphering the role of Vps26 and Vps35."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Traffic (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/tra.12237"}], "href": "https://doi.org/10.1111/tra.12237"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25367362"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25367362"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Yi Cui, Zhe Yang, Neftali Flores-Rodriguez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Formation of retromer transport carriers is disrupted by the Parkinson disease-linked Vps35 D620N variant."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Traffic (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/tra.12779"}], "href": "https://doi.org/10.1111/tra.12779"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33347683"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33347683"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Carles Vilariño-Güell, Christian Wider, Owen A Ross, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 mutations in Parkinson disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ajhg.2011.06.001"}], "href": "https://doi.org/10.1016/j.ajhg.2011.06.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21763482"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21763482"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Alexander Zimprich, Anna Benet-Pagès, Walter Struhal, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A mutation in VPS35, encoding a subunit of the retromer complex, causes late-onset Parkinson disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ajhg.2011.06.008"}], "href": "https://doi.org/10.1016/j.ajhg.2011.06.008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21763483"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21763483"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Una-Marie Sheerin, Gavin Charlesworth, Jose Bras, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Screening for VPS35 mutations in Parkinson's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2011.10.032"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2011.10.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22154191"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22154191"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Aline Verstraeten, Eline Wauters, David Crosiers, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Contribution of VPS35 genetic variability to LBD in the Flanders-Belgian population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2012.01.006"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2012.01.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22336192"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22336192"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Maya Ando, Manabu Funayama, Yuanzhe Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 mutation in Japanese patients with typical Parkinson's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mov Disord (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mds.25145"}], "href": "https://doi.org/10.1002/mds.25145"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22991136"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22991136"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Manu Sharma, John P A Ioannidis, Jan O Aasly, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A multi-centre clinico-genetic analysis of the VPS35 gene in Parkinson disease indicates reduced penetrance for disease-associated variants."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Med Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1136/jmedgenet-2012-101155"}], "href": "https://doi.org/10.1136/jmedgenet-2012-101155"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23125461"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23125461"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "YongPing Chen, Ke Chen, Wei Song, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 Asp620Asn and EIF4G1 Arg1205His mutations are rare in Parkinson disease from southwest China."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2012.11.003"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2012.11.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23261770"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23261770"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Karen Nuytemans, Guney Bademci, Vanessa Inchausti, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Whole exome sequencing of rare variants in EIF4G1 and VPS35 in Parkinson disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurology (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1212/WNL.0b013e31828727d4"}], "href": "https://doi.org/10.1212/WNL.0b013e31828727d4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23408866"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23408866"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Hao Deng, Kai Gao, Joseph Jankovic "}, {"type": "b", "children": [{"type": "t", "text": "The VPS35 gene and Parkinson's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mov Disord (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mds.25430"}], "href": "https://doi.org/10.1002/mds.25430"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23536430"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23536430"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Sumedha Sudhaman, Madhuri Behari, Shyla T Govindappa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 and EIF4G1 mutations are rare in Parkinson's disease among Indians."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2013.04.025"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2013.04.025"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23726718"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23726718"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Vincenzo Bonifati "}, {"type": "b", "children": [{"type": "t", "text": "Genetics of Parkinson's disease--state of the art, 2013."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Parkinsonism Relat Disord (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/S1353-8020(13)70009-9"}], "href": "https://doi.org/10.1016/S1353-8020(13"}, {"type": "t", "text": "70009-9) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24262182"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24262182"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Elpida Tsika, Liliane Glauser, Roger Moser, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parkinson's disease-linked mutations in VPS35 induce dopaminergic neurodegeneration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddu178"}], "href": "https://doi.org/10.1093/hmg/ddu178"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24740878"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24740878"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Eszter Zavodszky, Matthew N J Seaman, Kevin Moreau, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mutation in VPS35 associated with Parkinson's disease impairs WASH complex association and inhibits autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms4828"}], "href": "https://doi.org/10.1038/ncomms4828"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24819384"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24819384"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Ian J McGough, Florian Steinberg, Da Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer binding to FAM21 and the WASH complex is perturbed by the Parkinson disease-linked VPS35(D620N) mutation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Biol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cub.2014.06.024"}], "href": "https://doi.org/10.1016/j.cub.2014.06.024"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24980502"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24980502"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "L N Munsie, A J Milnerwood, P Seibler, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer-dependent neurotransmitter receptor trafficking to synapses is altered by the Parkinson's disease VPS35 mutation p.D620N."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddu582"}], "href": "https://doi.org/10.1093/hmg/ddu582"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25416282"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25416282"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Emil K Gustavsson, Ilaria Guella, Joanne Trinh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic variability of the retromer cargo recognition complex in parkinsonism."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mov Disord (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mds.26104"}], "href": "https://doi.org/10.1002/mds.26104"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25475142"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25475142"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Bilal R Malik, Vinay K Godena, Alexander J Whitworth "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 pathogenic mutations confer no dominant toxicity but partial loss of function in Drosophila and genetically interact with parkin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddv322"}], "href": "https://doi.org/10.1093/hmg/ddv322"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26251041"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26251041"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Wenzhang Wang, Xinglong Wang, Hisashi Fujioka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parkinson's disease-associated mutant VPS35 causes mitochondrial dysfunction by recycling DLP1 complexes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Med (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nm.3983"}], "href": "https://doi.org/10.1038/nm.3983"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26618722"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26618722"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Jordan Follett, Andrea Bugarcic, Brett M Collins, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer's Role in Endosomal Trafficking and Impaired Function in Neurodegenerative Diseases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Protein Pept Sci (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2174/1389203717666160311121246"}], "href": "https://doi.org/10.2174/1389203717666160311121246"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26965691"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26965691"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Jordan Follett, Andrea Bugarcic, Zhe Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parkinson Disease-linked Vps35 R524W Mutation Impairs the Endosomal Association of Retromer and Induces α-Synuclein Aggregation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M115.703157"}], "href": "https://doi.org/10.1074/jbc.M115.703157"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27385586"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27385586"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Chen Wang, Mengxi Niu, Zehua Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 regulates cell surface recycling and signaling of dopamine receptor D1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Aging (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neurobiolaging.2016.05.016"}], "href": "https://doi.org/10.1016/j.neurobiolaging.2016.05.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27460146"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27460146"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Erin T Williams, Xi Chen, Darren J Moore "}, {"type": "b", "children": [{"type": "t", "text": "VPS35, the Retromer Complex and Parkinson's Disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Parkinsons Dis (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3233/JPD-161020"}], "href": "https://doi.org/10.3233/JPD-161020"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28222538"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28222538"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Seung Pil Yun, Hyojung Kim, Sangwoo Ham, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 regulates parkin substrate AIMP2 toxicity by facilitating lysosomal clearance of AIMP2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/cddis.2017.157"}], "href": "https://doi.org/10.1038/cddis.2017.157"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28383562"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28383562"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Leping Zhou, Wenzhang Wang, Charles Hoppel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parkinson's disease-associated pathogenic VPS35 mutation causes complex I deficits."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta Mol Basis Dis (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbadis.2017.07.032"}], "href": "https://doi.org/10.1016/j.bbadis.2017.07.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28765075"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28765075"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Rafeeq Mir, Francesca Tonelli, Pawel Lis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Parkinson's disease VPS35[D620N] mutation enhances LRRK2-mediated Rab protein phosphorylation in mouse and human."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BCJ20180248"}], "href": "https://doi.org/10.1042/BCJ20180248"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29743203"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29743203"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Zoé Hanss, Simone B Larsen, Paul Antony, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mitochondrial and Clearance Impairment in p.D620N VPS35 Patient-Derived Neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mov Disord (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mds.28365"}], "href": "https://doi.org/10.1002/mds.28365"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33142012"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33142012"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "Kai Yu Ma, Michiel R Fokkens, Fulvio Reggiori, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Parkinson's disease-associated VPS35 mutant reduces mitochondrial membrane potential and impairs PINK1/Parkin-mediated mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Neurodegener (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s40035-021-00243-4"}], "href": "https://doi.org/10.1186/s40035-021-00243-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34127073"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34127073"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Chang Hyeok An, Yoo Ri Kim, Ho Shik Kim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Frameshift mutations of vacuolar protein sorting genes in gastric and colorectal cancers with microsatellite instability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Pathol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.humpath.2010.03.015"}], "href": "https://doi.org/10.1016/j.humpath.2010.03.015"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21733561"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21733561"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "Elisabetta Groppelli, Alice C Len, Luke A Granger, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer regulates HIV-1 envelope glycoprotein trafficking and incorporation into virions."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Pathog (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.ppat.1004518"}], "href": "https://doi.org/10.1371/journal.ppat.1004518"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25393110"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25393110"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Mo Zhou, Heidi Wiener, Wenjuan Su, et al. "}, {"type": "b", "children": [{"type": "t", "text": "VPS35 binds farnesylated N-Ras in the cytosol to regulate N-Ras trafficking."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.201604061"}], "href": "https://doi.org/10.1083/jcb.201604061"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27502489"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27502489"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "María Lucas, David C Gershlick, Ander Vidaurrazaga, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural Mechanism for Cargo Recognition by the Retromer Complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cell.2016.10.056"}], "href": "https://doi.org/10.1016/j.cell.2016.10.056"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27889239"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27889239"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Daniela Chmiest, Nanaocha Sharma, Natacha Zanin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Spatiotemporal control of interferon-induced JAK/STAT signalling and gene transcription by the retromer complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms13476"}], "href": "https://doi.org/10.1038/ncomms13476"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27917878"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27917878"}]}, {"type": "r", "ref": 42, "children": [{"type": "t", "text": "Guiji Zhang, Xia Tang, Li Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNA and RNA sequencing identified a novel oncogene VPS35 in liver hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41388-020-1215-6"}], "href": "https://doi.org/10.1038/s41388-020-1215-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32071398"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32071398"}]}, {"type": "r", "ref": 43, "children": [{"type": "t", "text": "Luca Muzio, Riccardo Sirtori, Davide Gornati, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retromer stabilization results in neuroprotection in a model of Amyotrophic Lateral Sclerosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-020-17524-7"}], "href": "https://doi.org/10.1038/s41467-020-17524-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32737286"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32737286"}]}]}]}
|
| Synonyms | PARK17, MEM3 |
| Proteins | VPS35_HUMAN |
| NCBI Gene ID | 55737 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
VPS35 has 9,249 functional associations with biological entities spanning 8 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 124 datasets.
Click the + buttons to view associations for VPS35 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of VPS35 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles | tissues with high or low expression of VPS35 gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of VPS35 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of VPS35 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of VPS35 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of VPS35 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of VPS35 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with VPS35 protein from the CCLE Cell Line Proteomics dataset. | |
| CellMarker Gene-Cell Type Associations | cell types associated with VPS35 gene from the CellMarker Gene-Cell Type Associations dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of VPS35 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of VPS35 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of VPS35 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| ClinVar Gene-Phenotype Associations | phenotypes associated with VPS35 gene from the curated ClinVar Gene-Phenotype Associations dataset. | |
| ClinVar Gene-Phenotype Associations 2025 | phenotypes associated with VPS35 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset. | |
| CM4AI U2OS Cell Map Protein Localization Assemblies | assemblies containing VPS35 protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing VPS35 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing VPS35 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing VPS35 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 | cellular components containing VPS35 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with VPS35 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with VPS35 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| CORUM Protein Complexes | protein complexs containing VPS35 protein from the CORUM Protein Complexes dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of VPS35 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with VPS35 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Chemical Interactions | chemicals interacting with VPS35 gene/protein from the curated CTD Gene-Chemical Interactions dataset. | |
| CTD Gene-Disease Associations | diseases associated with VPS35 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores | diseases involving VPS35 gene from the DISEASES Curated Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores 2025 | diseases involving VPS35 gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with VPS35 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with VPS35 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with VPS35 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with VPS35 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at VPS35 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of VPS35 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of VPS35 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing VPS35 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with VPS35 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing VPS35 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of VPS35 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving VPS35 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving VPS35 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving VPS35 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing VPS35 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing VPS35 protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing VPS35 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by VPS35 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by VPS35 gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by VPS35 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of VPS35 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of VPS35 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of VPS35 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of VPS35 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| HPM Cell Type and Tissue Protein Expression Profiles | cell types and tissues with high or low expression of VPS35 protein relative to other cell types and tissues from the HPM Cell Type and Tissue Protein Expression Profiles dataset. | |
| HPO Gene-Disease Associations | phenotypes associated with VPS35 gene by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for VPS35 from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with VPS35 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by VPS35 gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for VPS35 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of VPS35 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of VPS35 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of VPS35 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| KEGG Pathways 2026 | pathways involving VPS35 protein from the KEGG Pathways 2026 dataset. | |
| Kinase Library Serine Threonine Kinome Atlas | kinases that phosphorylate VPS35 protein from the Kinase Library Serine Threonine Atlas dataset. | |
| Kinase Library Tyrosine Kinome Atlas | kinases that phosphorylate VPS35 protein from the Kinase Library Tyrosine Kinome Atlas dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of VPS35 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of VPS35 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with VPS35 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of VPS35 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of VPS35 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of VPS35 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of VPS35 gene from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| LOCATE Curated Protein Localization Annotations | cellular components containing VPS35 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain VPS35 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by VPS35 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting VPS35 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by VPS35 gene mutations from the MPO Gene-Phenotype Associations dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of VPS35 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| NURSA Protein Complexes | protein complexs containing VPS35 protein recovered by IP-MS from the NURSA Protein Complexes dataset. | |
| OMIM Gene-Disease Associations | phenotypes associated with VPS35 gene from the curated OMIM Gene-Disease Associations dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for VPS35 from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of VPS35 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of VPS35 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving VPS35 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving VPS35 protein from the Wikipathways PFOCR 2024 dataset. | |
| ProteomicsDB Cell Type and Tissue Protein Expression Profiles | cell types and tissues with high or low expression of VPS35 protein relative to other cell types and tissues from the ProteomicsDB Cell Type and Tissue Protein Expression Profiles dataset. | |
| Reactome Pathways 2014 | pathways involving VPS35 protein from the Reactome Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving VPS35 protein from the Reactome Pathways 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of VPS35 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of VPS35 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of VPS35 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of VPS35 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at VPS35 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of VPS35 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of VPS35 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sanger Dependency Map Cancer Cell Line Proteomics | cell lines associated with VPS35 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of VPS35 gene from the Sci-Plex Drug Perturbation Signatures dataset. | |
| SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs | drug perturbations changing phosphorylation of VPS35 protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs dataset. | |
| SynGO Synaptic Gene Annotations | synaptic terms associated with VPS35 gene from the SynGO Synaptic Gene Annotations dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of VPS35 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of VPS35 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of VPS35 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of VPS35 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of VPS35 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of VPS35 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of VPS35 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of VPS35 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with VPS35 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with VPS35 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |