WTAPP1 Gene

Name Wilms tumor 1 associated protein pseudogene 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nWTAPP1 is a long noncoding RNA/pseudogene that functions as a key regulatory molecule in endothelial progenitor cells (EPCs), where it acts as a molecular decoy for miR-3120-5p. This decoy mechanism leads to increased expression of MMP-1 and activates the PI3K/Akt/mTOR signaling pathway while concurrently suppressing the autophagy pathway. Together, these effects promote EPC migration, invasion, and tube formation—processes critical for efficient angiogenesis during thrombus events."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn pancreatic ductal adenocarcinoma (PDAC), aberrant N6-methyladenosine (m6A) modification stabilizes WTAPP1 RNA via the CCHC-type zinc finger nucleic-acid binding protein (CNBP). The resulting elevated WTAPP1 binds to its protein-coding counterpart, WTAP mRNA, and recruits the EIF3 translation initiation complex to enhance WTAP protein translation. This upregulation in WTAP then enhances Wnt signaling, thereby contributing to cancer cell proliferation, invasiveness, and overall malignant progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in EPC angiogenesis and pancreatic cancer, WTAPP1 has also been implicated in other malignancies. Preliminary findings suggest that it may participate in the pathogenesis of non‐small cell lung cancer as well as mediate malignant progression in laryngeal cancer. These observations underline a broader function of WTAPP1 in oncogenesis, where it influences cancer cell behavior and disease trajectory."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wen-Dong Li, Dong-Ming Zhou, Li-Li Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA WTAPP1 Promotes Migration and Angiogenesis of Endothelial Progenitor Cells via MMP1 Through MicroRNA 3120 and Akt/PI3K/Autophagy Pathways."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/stem.2904"}], "href": "https://doi.org/10.1002/stem.2904"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30171660"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30171660"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Junge Deng, Jialiang Zhang, Ying Ye, et al. "}, {"type": "b", "children": [{"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "N"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "6"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " -methyladenosine-Mediated Upregulation of WTAPP1 Promotes WTAP Translation and Wnt Signaling to Facilitate Pancreatic Cancer Progression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-21-0494"}], "href": "https://doi.org/10.1158/0008-5472.CAN-21-0494"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34362795"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34362795"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Li Zhang, Chengyan Jin, Guiyun Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA WTAPP1 promotes cancer cell invasion and migration in NSCLC by downregulating lncRNA HAND2-AS1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Pulm Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12890-020-01180-0"}], "href": "https://doi.org/10.1186/s12890-020-01180-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32473628"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32473628"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "X-Y Shi, J-J Lin, X-J Ge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA WTAPP1 promotes proliferation of laryngeal carcinoma cells through regulating microRNA-592."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_202009_23038"}], "href": "https://doi.org/10.26355/eurrev_202009_23038"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33015795"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33015795"}]}]}]}
NCBI Gene ID 100288077
API
Download Associations
Predicted Functions View WTAPP1's ARCHS4 Predicted Functions.
Co-expressed Genes View WTAPP1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View WTAPP1's ARCHS4 Predicted Functions.

Functional Associations

WTAPP1 has 402 functional associations with biological entities spanning 5 categories (organism, chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for WTAPP1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of WTAPP1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of WTAPP1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of WTAPP1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of WTAPP1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of WTAPP1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of WTAPP1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with WTAPP1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with WTAPP1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of WTAPP1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of WTAPP1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of WTAPP1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.