XRCC1 Gene

Name X-ray repair complementing defective repair in Chinese hamster cells 1
Description The protein encoded by this gene is involved in the efficient repair of DNA single-strand breaks formed by exposure to ionizing radiation and alkylating agents. This protein interacts with DNA ligase III, polymerase beta and poly (ADP-ribose) polymerase to participate in the base excision repair pathway. It may play a role in DNA processing during meiogenesis and recombination in germ cells. A rare microsatellite polymorphism in this gene is associated with cancer in patients of varying radiosensitivity. [provided by RefSeq, Jul 2008]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nXRCC1 is a pivotal, non‐enzymatic scaffold protein that orchestrates DNA repair by assembling multiprotein complexes required for both base excision repair (BER) and single‐strand break repair (SSBR). Mechanistic studies demonstrate that XRCC1 is rapidly recruited to sites of DNA damage—often via poly(ADP‐ribose) signals generated by PARP enzymes—and facilitates repair by bridging enzymes such as DNA ligase III, APE1, polynucleotide kinase/phosphatase, and the glycosylase hOGG1. Through these interactions, XRCC1 promotes the efficient processing of oxidized and alkylated bases and maintains genomic stability by channeling repair intermediates to downstream enzymes that complete strand resealing."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther investigations have elucidated that XRCC1 not only provides a physical platform for a host of repair enzymes but also co‐localizes with replication factors such as PCNA during S phase, thereby synchronizing repair with DNA synthesis. Its interactions enhance the catalytic activities of partner proteins (for example, stimulating hOGG1 glycosylase activity) and promote the hand‐off of repair intermediates between enzymes. This coordination minimizes the persistence of DNA breaks that could otherwise trigger genomic instability."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "18"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nEpidemiologic and clinical studies have explored how genetic variations in XRCC1—particularly non‐synonymous polymorphisms such as Arg399Gln, Arg194Trp, and Arg280His—modulate DNA repair capacity and influence cancer susceptibility and therapeutic responses. Many investigations across diverse tumor types (including lung, breast, bladder, gastric, esophageal, and ovarian cancers) indicate that altered XRCC1 function, as manifested by these variants, correlates with increased DNA adduct levels, mutagen sensitivity, and differential outcomes following chemotherapy or radiotherapy. This body of work underscores the clinical relevance of XRCC1 as both a biomarker of repair proficiency and a potential mediator of individual risk in carcinogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "19"}, {"type": "fg_fs", "start_ref": "9", "end_ref": "11"}, {"type": "fg_f", "ref": "21"}, {"type": "fg_fs", "start_ref": "12", "end_ref": "14"}, {"type": "fg_fs", "start_ref": "22", "end_ref": "24"}, {"type": "fg_f", "ref": "18"}, {"type": "fg_f", "ref": "25"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_f", "ref": "27"}, {"type": "fg_f", "ref": "17"}, {"type": "fg_fs", "start_ref": "29", "end_ref": "41"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditionally, several studies have emphasized that perturbations in XRCC1 function—whether through direct genetic mutations or single‐nucleotide polymorphisms—can lead to compromised DNA repair efficiency, resulting in increased cellular sensitivity to DNA‐damaging agents and contributing to genomic instability. These findings not only solidify the essential role of XRCC1 in preserving DNA integrity but also highlight its potential as a therapeutic target; for instance, defective XRCC1 function has been linked to adverse outcomes in neurodegenerative disorders and may be modulated to improve responses to cancer therapies."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}, {"type": "fg_f", "ref": "42"}, {"type": "fg_f", "ref": "21"}, {"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "23"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCollectively, the studies across diverse model systems and patient populations underscore that XRCC1 is not only fundamental for mediating prompt and efficient repair of endogenous and exogenous DNA single‐strand breaks but also plays a critical role in modulating individual susceptibility to cancer and treatment response. Ongoing research into XRCC1’s mechanistic interactions and the impact of its genetic variants will continue to provide insights into its contribution to genomic maintenance and its value as a biomarker and potential therapeutic target in precision medicine."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "19"}, {"type": "fg_f", "ref": "8"}, {"type": "fg_f", "ref": "20"}, {"type": "fg_fs", "start_ref": "9", "end_ref": "11"}, {"type": "fg_f", "ref": "1"}, {"type": "fg_f", "ref": "42"}, {"type": "fg_f", "ref": "21"}, {"type": "fg_fs", "start_ref": "12", "end_ref": "14"}, {"type": "fg_f", "ref": "2"}, {"type": "fg_fs", "start_ref": "22", "end_ref": "24"}, {"type": "fg_f", "ref": "18"}, {"type": "fg_f", "ref": "25"}, {"type": "fg_f", "ref": "3"}, {"type": "fg_f", "ref": "27"}, {"type": "fg_f", "ref": "17"}, {"type": "fg_f", "ref": "29"}, {"type": "fg_f", "ref": "4"}, {"type": "fg_f", "ref": "31"}, {"type": "fg_f", "ref": "5"}, {"type": "fg_f", "ref": "32"}, {"type": "fg_f", "ref": "15"}, {"type": "fg_fs", "start_ref": "33", "end_ref": "41"}, {"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jae Yong Park, Su Yeon Lee, Hyo-Sung Jeon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphism of the DNA repair gene XRCC1 and risk of primary lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2002)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11815397"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11815397"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Stéphanie Marsin, Antonio E Vidal, Marguerite Sossou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of XRCC1 in the coordination and stimulation of oxidative DNA damage repair initiated by the DNA glycosylase hOGG1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M306160200"}], "href": "https://doi.org/10.1074/jbc.M306160200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12933815"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12933815"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jinshui Fan, Marit Otterlei, Heng-Kuan Wong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "XRCC1 co-localizes and physically interacts with PCNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkh556"}], "href": "https://doi.org/10.1093/nar/gkh556"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15107487"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15107487"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xuemei Zhang, Xiaoping Miao, Gang Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in DNA base excision repair genes ADPRT and XRCC1 and risk of lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2005)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15705867"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15705867"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Reto Brem, Janet Hall "}, {"type": "b", "children": [{"type": "t", "text": "XRCC1 is required for DNA single-strand break repair in human cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gki543"}], "href": "https://doi.org/10.1093/nar/gki543"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15867196"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15867196"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Hana Hanzlikova, William Gittens, Katerina Krejcikova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Overlapping roles for PARP1 and PARP2 in the recruitment of endogenous XRCC1 and PNKP into oxidized chromatin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkw1246"}], "href": "https://doi.org/10.1093/nar/gkw1246"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27965414"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27965414"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Nicolas C Hoch, Hana Hanzlikova, Stuart L Rulten, et al. "}, {"type": "b", "children": [{"type": "t", "text": "XRCC1 mutation is associated with PARP1 hyperactivation and cerebellar ataxia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature20790"}], "href": "https://doi.org/10.1038/nature20790"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28002403"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28002403"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "D Ratnasinghe, S X Yao, J A Tangrea, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms of the DNA repair gene XRCC1 and lung cancer risk."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2001)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11219768"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11219768"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "E J Duell, R C Millikan, G S Pittman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in the DNA repair gene XRCC1 and breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2001)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11303590"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11303590"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "G Matullo, S Guarrera, S Carturan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNA repair gene polymorphisms, bulky DNA adducts in white blood cells and bladder cancer in a case-control study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Cancer (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/ijc.1228"}], "href": "https://doi.org/10.1002/ijc.1228"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11304692"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11304692"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "G Matullo, D Palli, M Peluso, et al. "}, {"type": "b", "children": [{"type": "t", "text": "XRCC1, XRCC3, XPD gene polymorphisms, smoking and (32)P-DNA adducts in a sample of healthy subjects."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/22.9.1437"}], "href": "https://doi.org/10.1093/carcin/22.9.1437"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11532866"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11532866"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Tasha R Smith, Mark Steven Miller, Kurt Lohman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms of XRCC1 and XRCC3 genes and susceptibility to breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0304-3835(02)00595-5"}], "href": "https://doi.org/10.1016/s0304-3835(02"}, {"type": "t", "text": "00595-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12565173"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12565173"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Wei Zhou, Geoffrey Liu, David P Miller, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in the DNA repair genes XRCC1 and ERCC2, smoking, and lung cancer risk."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2003)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12692111"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12692111"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Yunfei Wang, Margaret R Spitz, Yong Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "From genotype to phenotype: correlating XRCC1 polymorphisms with mutagen sensitivity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "DNA Repair (Amst) (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1568-7864(03)00085-5"}], "href": "https://doi.org/10.1016/s1568-7864(03"}, {"type": "t", "text": "00085-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12893086"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12893086"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Shanbeh Zienolddiny, Daniele Campa, Helge Lind, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms of DNA repair genes and risk of non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgi232"}], "href": "https://doi.org/10.1093/carcin/bgi232"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16195237"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16195237"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Rayjean J Hung, Janet Hall, Paul Brennan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic polymorphisms in the base excision repair pathway and cancer risk: a HuGE review."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Epidemiol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/aje/kwi318"}], "href": "https://doi.org/10.1093/aje/kwi318"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16221808"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16221808"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "J Stoehlmacher, D J Park, W Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A multivariate analysis of genomic polymorphisms: prediction of clinical outcome to 5-FU/oxaliplatin combination chemotherapy in refractory colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Br J Cancer (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.bjc.6601975"}], "href": "https://doi.org/10.1038/sj.bjc.6601975"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15213713"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15213713"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Somali Sanyal, Fabiola Festa, Shigeru Sakano, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in DNA repair and metabolic genes in bladder cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgh058"}], "href": "https://doi.org/10.1093/carcin/bgh058"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14688016"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14688016"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "K K Divine, F D Gilliland, R E Crowell, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The XRCC1 399 glutamine allele is a risk factor for adenocarcinoma of the lung."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mutat Res (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0921-8777(00)00059-8"}], "href": "https://doi.org/10.1016/s0921-8777(00"}, {"type": "t", "text": "00059-8) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11104903"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11104903"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "D Butkiewicz, M Rusin, L Enewold, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic polymorphisms in DNA repair genes and risk of lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2001)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/22.4.593"}], "href": "https://doi.org/10.1093/carcin/22.4.593"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11285194"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11285194"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Senqing Chen, Deliang Tang, Kaixian Xue, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DNA repair gene XRCC1 and XPD polymorphisms and risk of lung cancer in a Chinese population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/23.8.1321"}], "href": "https://doi.org/10.1093/carcin/23.8.1321"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12151350"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12151350"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Ron H J Mathijssen, Sharon Marsh, Mats O Karlsson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Irinotecan pathway genotype analysis to predict pharmacokinetics."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Cancer Res (2003)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12960109"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12960109"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Christian Nicolaj Andreassen, Jan Alsner, Marie Overgaard, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Prediction of normal tissue radiosensitivity from polymorphisms in candidate genes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Radiother Oncol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.radonc.2003.09.010"}], "href": "https://doi.org/10.1016/j.radonc.2003.09.010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14643949"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14643949"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Norman Moullan, David G Cox, Sandra Angèle, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in the DNA repair gene XRCC1, breast cancer risk, and response to radiotherapy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2003)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14652276"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14652276"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Pavel Vodicka, Rajiv Kumar, Rudolf Stetina, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic polymorphisms in DNA repair genes and possible links with DNA repair rates, chromosomal aberrations and single-strand breaks in DNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgh064"}], "href": "https://doi.org/10.1093/carcin/bgh064"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14729591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14729591"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Asta Försti, Sabrina Angelini, Fabiola Festa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single nucleotide polymorphisms in breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2004)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15010895"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15010895"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Sarada Gurubhagavatula, Geoffrey Liu, Sohee Park, et al. "}, {"type": "b", "children": [{"type": "t", "text": "XPD and XRCC1 genetic polymorphisms are prognostic factors in advanced non-small-cell lung cancer patients treated with platinum chemotherapy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Oncol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1200/JCO.2004.08.067"}], "href": "https://doi.org/10.1200/JCO.2004.08.067"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15173214"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15173214"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Bingtao Hao, Haijian Wang, Kaixin Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of genetic variants in base excision repair pathway and their associations with risk of esophageal squamous cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-04-0372"}], "href": "https://doi.org/10.1158/0008-5472.CAN-04-0372"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15205355"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15205355"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Odilia Popanda, Torsten Schattenberg, Chi Tai Phong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Specific combinations of DNA repair gene variants and increased risk for non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgh264"}], "href": "https://doi.org/10.1093/carcin/bgh264"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15333465"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15333465"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Marc Audebert, Bernard Salles, Patrick Calsou "}, {"type": "b", "children": [{"type": "t", "text": "Involvement of poly(ADP-ribose) polymerase-1 and XRCC1/DNA ligase III in an alternative route for DNA double-strand breaks rejoining."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M404524200"}], "href": "https://doi.org/10.1074/jbc.M404524200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15498778"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15498778"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Karin Broberg, Jonas Björk, Karin Paulsson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Constitutional short telomeres are strong genetic susceptibility markers for bladder cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgi063"}], "href": "https://doi.org/10.1093/carcin/bgi063"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15746160"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15746160"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Zhibin Hu, Hongxia Ma, Feng Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "XRCC1 polymorphisms and cancer risk: a meta-analysis of 38 case-control studies."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Epidemiol Biomarkers Prev (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1055-9965.EPI-04-0793"}], "href": "https://doi.org/10.1158/1055-9965.EPI-04-0793"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16030121"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16030121"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "R de las Peñas, M Sanchez-Ronco, V Alberola, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in DNA repair genes modulate survival in cisplatin/gemcitabine-treated non-small-cell lung cancer patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Oncol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/annonc/mdj135"}], "href": "https://doi.org/10.1093/annonc/mdj135"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16407418"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16407418"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Victor Moreno, Federica Gemignani, Stefano Landi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Polymorphisms in genes of nucleotide and base excision repair: risk and prognosis of colorectal cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Cancer Res (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1078-0432.CCR-05-1363"}], "href": "https://doi.org/10.1158/1078-0432.CCR-05-1363"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16609022"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16609022"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Chikako Kiyohara, Koichi Takayama, Yoichi Nakanishi "}, {"type": "b", "children": [{"type": "t", "text": "Association of genetic polymorphisms in the base excision repair pathway with lung cancer risk: a meta-analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Lung Cancer (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.lungcan.2006.08.009"}], "href": "https://doi.org/10.1016/j.lungcan.2006.08.009"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16982113"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16982113"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "Unknown Authors "}, {"type": "b", "children": [{"type": "t", "text": "Commonly studied single-nucleotide polymorphisms and breast cancer: results from the Breast Cancer Association Consortium."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Natl Cancer Inst (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/jnci/djj374"}], "href": "https://doi.org/10.1093/jnci/djj374"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17018785"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17018785"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Pavel Vodicka, Rudolf Stetina, Veronika Polakova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association of DNA repair polymorphisms with DNA repair functional outcomes in healthy human subjects."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/bgl187"}], "href": "https://doi.org/10.1093/carcin/bgl187"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17028303"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17028303"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "Annamaria Ruzzo, Francesco Graziano, Fotios Loupakis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pharmacogenetic profiling in patients with advanced colorectal cancer treated with first-line FOLFOX-4 chemotherapy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Oncol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1200/JCO.2006.08.1844"}], "href": "https://doi.org/10.1200/JCO.2006.08.1844"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17401013"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17401013"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Sharon Marsh, Jim Paul, Cristi R King, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pharmacogenetic assessment of toxicity and outcome after platinum plus taxane chemotherapy in ovarian cancer: the Scottish Randomised Trial in Ovarian Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Oncol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1200/JCO.2006.10.4752"}], "href": "https://doi.org/10.1200/JCO.2006.10.4752"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17925548"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17925548"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "Michael S Braun, Susan D Richman, Philip Quirke, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Predictive biomarkers of chemotherapy efficacy in colorectal cancer: results from the UK MRC FOCUS trial."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Oncol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1200/JCO.2007.15.5580"}], "href": "https://doi.org/10.1200/JCO.2007.15.5580"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18509181"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18509181"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Michael Weinfeld, Rajam S Mani, Ismail Abdou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tidying up loose ends: the role of polynucleotide kinase/phosphatase in DNA strand break repair."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Trends Biochem Sci (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.tibs.2011.01.006"}], "href": "https://doi.org/10.1016/j.tibs.2011.01.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21353781"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21353781"}]}, {"type": "r", "ref": 42, "children": [{"type": "t", "text": "Yawei Qiao, Margaret R Spitz, Hongbing Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Modulation of repair of ultraviolet damage in the host-cell reactivation assay by polymorphic XPC and XPD/ERCC2 genotypes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Carcinogenesis (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/carcin/23.2.295"}], "href": "https://doi.org/10.1093/carcin/23.2.295"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11872635"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11872635"}]}]}]}
Synonyms SCAR26, RCC
Proteins XRCC1_HUMAN
NCBI Gene ID 7515
API
Download Associations
Predicted Functions View XRCC1's ARCHS4 Predicted Functions.
Co-expressed Genes View XRCC1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View XRCC1's ARCHS4 Predicted Functions.

Functional Associations

XRCC1 has 9,121 functional associations with biological entities spanning 9 categories (molecular profile, organism, chemical, functional term, phrase or reference, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 125 datasets.

Click the + buttons to view associations for XRCC1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of XRCC1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles tissues with high or low expression of XRCC1 gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray tissue samples with high or low expression of XRCC1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset.
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of XRCC1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of XRCC1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
BioGPS Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset.
BioGPS Human Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of XRCC1 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset.
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of XRCC1 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of XRCC1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
CCLE Cell Line Proteomics Cell lines associated with XRCC1 protein from the CCLE Cell Line Proteomics dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of XRCC1 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of XRCC1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of XRCC1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CMAP Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of XRCC1 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores cellular components containing XRCC1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing XRCC1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores cellular components containing XRCC1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing XRCC1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores cellular components co-occuring with XRCC1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with XRCC1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
CORUM Protein Complexes protein complexs containing XRCC1 protein from the CORUM Protein Complexes dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of XRCC1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene Mutation Profiles cell lines with XRCC1 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset.
CTD Gene-Chemical Interactions chemicals interacting with XRCC1 gene/protein from the curated CTD Gene-Chemical Interactions dataset.
CTD Gene-Disease Associations diseases associated with XRCC1 gene/protein from the curated CTD Gene-Disease Associations dataset.
DepMap CRISPR Gene Dependency cell lines with fitness changed by XRCC1 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset.
DISEASES Curated Gene-Disease Association Evidence Scores 2025 diseases involving XRCC1 gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores diseases co-occuring with XRCC1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with XRCC1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with XRCC1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with XRCC1 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at XRCC1 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of XRCC1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of XRCC1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing XRCC1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GAD Gene-Disease Associations diseases associated with XRCC1 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.
GAD High Level Gene-Disease Associations diseases associated with XRCC1 gene in GWAS and other genetic association datasets from the GAD High Level Gene-Disease Associations dataset.
GDSC Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset.
GeneRIF Biological Term Annotations biological terms co-occuring with XRCC1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing XRCC1 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of XRCC1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GlyGen Glycosylated Proteins ligands (chemical) binding XRCC1 protein from the GlyGen Glycosylated Proteins dataset.
GO Biological Process Annotations 2015 biological processes involving XRCC1 gene from the curated GO Biological Process Annotations 2015 dataset.
GO Biological Process Annotations 2023 biological processes involving XRCC1 gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving XRCC1 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2015 cellular components containing XRCC1 protein from the curated GO Cellular Component Annotations 2015 dataset.
GO Cellular Component Annotations 2023 cellular components containing XRCC1 protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing XRCC1 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2015 molecular functions performed by XRCC1 gene from the curated GO Molecular Function Annotations 2015 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by XRCC1 gene from the curated GO Molecular Function Annotations 2023 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by XRCC1 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of XRCC1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of XRCC1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of XRCC1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of XRCC1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GWAS Catalog SNP-Phenotype Associations phenotypes associated with XRCC1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.
GWASdb SNP-Disease Associations diseases associated with XRCC1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with XRCC1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset.
HPA Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset.
HPA Tissue Gene Expression Profiles tissues with high or low expression of XRCC1 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of XRCC1 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
HPA Tissue Sample Gene Expression Profiles tissue samples with high or low expression of XRCC1 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.
HPM Cell Type and Tissue Protein Expression Profiles cell types and tissues with high or low expression of XRCC1 protein relative to other cell types and tissues from the HPM Cell Type and Tissue Protein Expression Profiles dataset.
Hub Proteins Protein-Protein Interactions interacting hub proteins for XRCC1 from the curated Hub Proteins Protein-Protein Interactions dataset.
HuGE Navigator Gene-Phenotype Associations phenotypes associated with XRCC1 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset.
InterPro Predicted Protein Domain Annotations protein domains predicted for XRCC1 protein from the InterPro Predicted Protein Domain Annotations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of XRCC1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
KEA Substrates of Kinases kinases that phosphorylate XRCC1 protein from the curated KEA Substrates of Kinases dataset.
Kinase Library Serine Threonine Kinome Atlas kinases that phosphorylate XRCC1 protein from the Kinase Library Serine Threonine Atlas dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of XRCC1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of XRCC1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles cell lines with XRCC1 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of XRCC1 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of XRCC1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of XRCC1 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
LOCATE Curated Protein Localization Annotations cellular components containing XRCC1 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain XRCC1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
MGI Mouse Phenotype Associations 2023 phenotypes of transgenic mice caused by XRCC1 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset.
MiRTarBase microRNA Targets microRNAs targeting XRCC1 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of XRCC1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
MPO Gene-Phenotype Associations phenotypes of transgenic mice caused by XRCC1 gene mutations from the MPO Gene-Phenotype Associations dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of XRCC1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of XRCC1 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
NURSA Protein Complexes protein complexs containing XRCC1 protein recovered by IP-MS from the NURSA Protein Complexes dataset.
NURSA Protein-Protein Interactions interacting proteins for XRCC1 from the NURSA Protein-Protein Interactions dataset.
Pathway Commons Protein-Protein Interactions interacting proteins for XRCC1 from the Pathway Commons Protein-Protein Interactions dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of XRCC1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations gene perturbations changing expression of XRCC1 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
PFOCR Pathway Figure Associations 2023 pathways involving XRCC1 protein from the PFOCR Pathway Figure Associations 2023 dataset.
PFOCR Pathway Figure Associations 2024 pathways involving XRCC1 protein from the Wikipathways PFOCR 2024 dataset.
Phosphosite Textmining Biological Term Annotations biological terms co-occuring with XRCC1 protein in abstracts of publications describing phosphosites from the Phosphosite Textmining Biological Term Annotations dataset.
PhosphoSitePlus Substrates of Kinases kinases that phosphorylate XRCC1 protein from the curated PhosphoSitePlus Substrates of Kinases dataset.
PID Pathways pathways involving XRCC1 protein from the PID Pathways dataset.
ProteomicsDB Cell Type and Tissue Protein Expression Profiles cell types and tissues with high or low expression of XRCC1 protein relative to other cell types and tissues from the ProteomicsDB Cell Type and Tissue Protein Expression Profiles dataset.
Reactome Pathways 2014 pathways involving XRCC1 protein from the Reactome Pathways dataset.
Reactome Pathways 2024 pathways involving XRCC1 protein from the Reactome Pathways 2024 dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of XRCC1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of XRCC1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of XRCC1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.
Roadmap Epigenomics Cell and Tissue Gene Expression Profiles cell types and tissues with high or low expression of XRCC1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at XRCC1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of XRCC1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of XRCC1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sanger Dependency Map Cancer Cell Line Proteomics cell lines associated with XRCC1 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs drug perturbations changing phosphorylation of XRCC1 protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs dataset.
SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands ligand (protein) perturbations changing phosphorylation of XRCC1 protein from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands dataset.
TargetScan Predicted Conserved microRNA Targets microRNAs regulating expression of XRCC1 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset.
TargetScan Predicted Nonconserved microRNA Targets microRNAs regulating expression of XRCC1 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of XRCC1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores tissues with high expression of XRCC1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of XRCC1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores tissues with high expression of XRCC1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of XRCC1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores tissues co-occuring with XRCC1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with XRCC1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.
Virus MINT Protein-Viral Protein Interactions interacting viral proteins for XRCC1 from the Virus MINT Protein-Viral Protein Interactions dataset.
Virus MINT Protein-Virus Interactions viruses interacting with XRCC1 from the Virus MINT Protein-Virus Interactions dataset.
WikiPathways Pathways 2024 pathways involving XRCC1 protein from the WikiPathways Pathways 2024 dataset.