| HGNC Family | Zinc fingers |
| Name | zinc finger protein 559 |
| Description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nExtensive investigations of Toll‐like receptor (TLR) signaling have revealed that stimulation of several TLRs—most notably TLR3 and TLR4—activates a common MyD88‐independent, TRIF‐dependent pathway that is essential for the induction of type I interferons and the subsequent orchestration of balanced inflammatory responses. These studies demonstrate that upon recognition of pathogen‐associated molecular patterns, TRIF serves as a critical adaptor that binds to TLRs to activate interferon regulatory factors (such as IRF3), promote NF‑κB translocation, and thus drive antiviral host defense and cytokine production."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional work has expanded our understanding of TLR‐mediated signal transduction by showing that TRIF, often in cooperation with other adaptors such as TRAM and MyD88, participates in diverse cellular processes. These include the induction of programmed cell death via caspase‑8 and RIP kinase pathways, modulation of autophagy and inflammasome activation, and even the crosstalk with adaptive immune responses in contexts ranging from septic shock and myocardial ischemia to transplant‐induced inflammation. Consequently, this body of research underscores not only the importance of TRIF in fine‑tuning both proinflammatory and antiviral responses but also its potential as a therapeutic target in several pathological settings."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, although these studies provide a detailed elucidation of the TRIF‐dependent branch of TLR signaling—and its diverse roles in antiviral defense, regulation of cell death, autophagy, and fine‑tuning of inflammatory as well as adaptive immune responses—none of the referenced abstracts mention or functionally characterize ZNF559. ZNF559, a putative zinc finger protein, is not implicated in any of the classical TLR or TRIF pathways described in these works. Thus, while the TRIF‐mediated signaling network is clearly pivotal in coordinating many aspects of innate immunity, the function of ZNF559 in this context remains undefined and represents an important gap for future investigation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "41"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hiroyuki Oshiumi, Misako Matsumoto, Kenji Funami, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Cutting edge: bacterial infection induces hematopoietic stem and progenitor cell expansion in the absence of TLR signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.0903652"}], "href": "https://doi.org/10.4049/jimmunol.0903652"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20130216"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20130216"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Mathias Krummen, Sandra Balkow, Limei Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Release of IL-12 by dendritic cells activated by TLR ligation is dependent on MyD88 signaling, whereas TRIF signaling is indispensable for TLR synergy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Leukoc Biol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1189/jlb.0408228"}], "href": "https://doi.org/10.1189/jlb.0408228"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20360404"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20360404"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Yan Sun, Mausita Karmakar, Sanhita Roy, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "TRIF mediates Toll-like receptor 5-induced signaling in intestinal epithelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.158394"}], "href": "https://doi.org/10.1074/jbc.M110.158394"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20855887"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20855887"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Qing Lin, Dan Fang, Jiazhu Fang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired wound healing with defective expression of chemokines and recruitment of myeloid cells in TLR3-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.1003007"}], "href": "https://doi.org/10.4049/jimmunol.1003007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21317384"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21317384"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Kyoko Shinya, Mutsumi Ito, Akiko Makino, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The TLR4-TRIF pathway protects against H5N1 influenza virus infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Virol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/JVI.06168-11"}], "href": "https://doi.org/10.1128/JVI.06168-11"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22031950"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22031950"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Leandra Figueroa, Yanbao Xiong, Chang Song, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Toll/interleukin-1 receptor domain-containing adapter inducing interferon-β mediates microglial phagocytosis of degenerating axons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.0203-12.2012"}], "href": "https://doi.org/10.1523/JNEUROSCI.0203-12.2012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22649252"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22649252"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Prajwal Gurung, R K Subbarao Malireddi, Paras K Anand, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Steady-state neutrophil homeostasis is dependent on TLR4/TRIF signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2012-05-429589"}], "href": "https://doi.org/10.1182/blood-2012-05-429589"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23223360"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23223360"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Anna M Lundberg, Daniel F J Ketelhuth, Maria E Johansson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Toll-like receptor 3 and 4 signalling through the TRIF and TRAM adaptors in haematopoietic cells promotes atherosclerosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cardiovasc Res (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/cvr/cvt033"}], "href": "https://doi.org/10.1093/cvr/cvt033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23417039"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23417039"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Yan Yang, Bing Liao, Suyun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "E3 ligase WWP2 negatively regulates TLR3-mediated innate immune response by targeting TRIF for ubiquitination and degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1220271110"}], "href": "https://doi.org/10.1073/pnas.1220271110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23479606"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23479606"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Mark T Orr, Malcolm S Duthie, Hillarie Plessner Windish, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "A protective Hsp70-TLR4 pathway in lethal oxidant lung injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.1300052"}], "href": "https://doi.org/10.4049/jimmunol.1300052"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23817427"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23817427"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Pedro M Pimentel-Coelho, Jean-Philippe Michaud, Serge Rivest "}, {"type": "b", "children": [{"type": "t", "text": "Evidence for a gender-specific protective role of innate immune receptors in a model of perinatal brain injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.0535-13.2013"}], "href": "https://doi.org/10.1523/JNEUROSCI.0535-13.2013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23843525"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23843525"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "William J Kaiser, Haripriya Sridharan, Chunzi Huang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Role of extracellular RNA and TLR3-Trif signaling in myocardial ischemia-reperfusion injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Am Heart Assoc (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/JAHA.113.000683"}], "href": "https://doi.org/10.1161/JAHA.113.000683"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24390148"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24390148"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Majid Sakhi Jabir, Neil D Ritchie, Dong Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Caspase-1 cleavage of the TLR adaptor TRIF inhibits autophagy and β-interferon production during Pseudomonas aeruginosa infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Host Microbe (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.chom.2014.01.010"}], "href": "https://doi.org/10.1016/j.chom.2014.01.010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24528867"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24528867"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Rajesh Rajaiah, Darren J Perkins, Derek D C Ireland, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CD14 dependence of TLR4 endocytosis and TRIF signaling displays ligand specificity and is dissociable in endotoxin tolerance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1424980112"}], "href": "https://doi.org/10.1073/pnas.1424980112"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26106158"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26106158"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Zhang Cheng, Brooks Taylor, Diana R Ourthiague, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Prothymosin-alpha preconditioning activates TLR4-TRIF signaling to induce protection of ischemic retina."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurochem (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jnc.13356"}], "href": "https://doi.org/10.1111/jnc.13356"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26364961"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26364961"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "Shuang Zhang, Min Yu, Qiang Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Annexin A2 binds to endosomes and negatively regulates TLR4-triggered inflammatory responses via the TRAM-TRIF pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep15859"}], "href": "https://doi.org/10.1038/srep15859"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26527544"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26527544"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Xin Wang, Tanmay Majumdar, Patricia Kessler, et al. "}, {"type": "b", "children": [{"type": "t", "text": "STING Requires the Adaptor TRIF to Trigger Innate Immune Responses to Microbial Infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Host Microbe (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.chom.2016.08.002"}], "href": "https://doi.org/10.1016/j.chom.2016.08.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27631700"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27631700"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "Mary Y Chang, Inkyung Kang, Michael Gale, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Versican is produced by Trif- and type I interferon-dependent signaling in macrophages and contributes to fine control of innate immunity in lungs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Lung Cell Mol Physiol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajplung.00353.2017"}], "href": "https://doi.org/10.1152/ajplung.00353.2017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28912382"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28912382"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Okiru Komine, Hirofumi Yamashita, Noriko Fujimori-Tonou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Innate immune adaptor TRIF deficiency accelerates disease progression of ALS mice with accumulation of aberrantly activated astrocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Differ (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41418-018-0098-3"}], "href": "https://doi.org/10.1038/s41418-018-0098-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29568058"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29568058"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "Wenjun Li, Guoshuai Feng, Jason M Gauthier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ferroptotic cell death and TLR4/Trif signaling initiate neutrophil recruitment after heart transplantation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI126428"}], "href": "https://doi.org/10.1172/JCI126428"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30830879"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30830879"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Xin Wu, Caoqi Lei, Tian Xia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of TRIF-mediated innate immune response by K27-linked polyubiquitination and deubiquitination."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-019-12145-1"}], "href": "https://doi.org/10.1038/s41467-019-12145-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31511519"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31511519"}]}]}]}
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| Synonyms | NBLA00121 |
| Proteins | ZN559_HUMAN |
| NCBI Gene ID | 84527 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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ZNF559 has 3,070 functional associations with biological entities spanning 9 categories (molecular profile, organism, functional term, phrase or reference, disease, phenotype or trait, chemical, structural feature, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 81 datasets.
Click the + buttons to view associations for ZNF559 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ZNF559 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ZNF559 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of ZNF559 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of ZNF559 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of ZNF559 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of ZNF559 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of ZNF559 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of ZNF559 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of ZNF559 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing ZNF559 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with ZNF559 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of ZNF559 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with ZNF559 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Disease Associations | diseases associated with ZNF559 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by ZNF559 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with ZNF559 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with ZNF559 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with ZNF559 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at ZNF559 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of ZNF559 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of ZNF559 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing ZNF559 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of ZNF559 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of ZNF559 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of ZNF559 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of ZNF559 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of ZNF559 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving ZNF559 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving ZNF559 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving ZNF559 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing ZNF559 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing ZNF559 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by ZNF559 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by ZNF559 gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by ZNF559 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx eQTL | SNPs regulating expression of ZNF559 gene from the GTEx eQTL dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of ZNF559 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of ZNF559 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with ZNF559 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with ZNF559 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of ZNF559 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of ZNF559 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of ZNF559 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of ZNF559 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for ZNF559 from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for ZNF559 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of ZNF559 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of ZNF559 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of ZNF559 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of ZNF559 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with ZNF559 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of ZNF559 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LOCATE Curated Protein Localization Annotations | cellular components containing ZNF559 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain ZNF559 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting ZNF559 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MSigDB Cancer Gene Co-expression Modules | co-expressed genes for ZNF559 from the MSigDB Cancer Gene Co-expression Modules dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of ZNF559 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for ZNF559 from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of ZNF559 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Reactome Pathways 2014 | pathways involving ZNF559 protein from the Reactome Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving ZNF559 protein from the Reactome Pathways 2024 dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of ZNF559 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at ZNF559 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of ZNF559 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of ZNF559 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of ZNF559 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of ZNF559 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of ZNF559 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of ZNF559 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of ZNF559 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of ZNF559 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of ZNF559 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of ZNF559 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with ZNF559 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with ZNF559 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |