ZNF658B Gene

Name zinc finger protein 658B, pseudogene
Description Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe provided abstracts focus predominantly on mitochondrial proteostasis, antiviral signaling, and rapid neuroendocrine effects, yet none of them describe or ascribe any function to ZNF658B. One study characterizes mitochondrial CLPP and its role in regulating protein synthesis by controlling mitoribosome assembly through the degradation of ERAL1, a putative 12S rRNA chaperone. In this context, precise proteolytic removal of ERAL1 by the ClpXP protease ensures proper maturation of the mitoribosome and efficient mitochondrial translation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAnother investigation demonstrates that, following RNA viral infections, ERAL1 is released from mitochondria and interacts with MAVS to facilitate K63‐linked ubiquitination of RIG-I/MDA5, thereby promoting antiviral signaling. This study underscores the importance of mitochondrial proteins in innate immunity, though no contribution of ZNF658B is mentioned in the reported antiviral pathway."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA comparative proteomic analysis contrasting the effects of ClpP and LonP1 deficiencies further shows that while ClpP loss leads to an accumulation of ERAL1 and defects in mitoribosome assembly, LonP1 deficiency produces respiratory dysfunction and altered immune defense profiles without impacting the translational machinery. Again, the role of ZNF658B is not addressed in this mitochondrial quality control framework."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, research into the rapid modulation of male sexual behavior by neuroestrogens indicates that membrane estrogen receptor α (mERα) is critical in the immediate control of sexual performance. Although the study effectively decouples nuclear and membrane receptor contributions to behavior, it does not implicate ZNF658B or related zinc finger proteins in these neuroendocrine processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the abstracts collectively elucidate mechanisms of mitochondrial translation control, innate antiviral signaling, and rapid neuroestrogen actions, none present any evidence regarding a function for ZNF658B.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Karolina Szczepanowska, Priyanka Maiti, Alexandra Kukat, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CLPP coordinates mitoribosomal assembly through the regulation of ERAL1 levels."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO J (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embj.201694253"}], "href": "https://doi.org/10.15252/embj.201694253"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27797820"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27797820"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Siji Li, Ming Kuang, Luoying Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The mitochondrial protein ERAL1 suppresses RNA virus infection by facilitating RIG-I-like receptor signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2020.108631"}], "href": "https://doi.org/10.1016/j.celrep.2020.108631"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33472079"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33472079"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jana Key, Aneesha Kohli, Clea Bárcena, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Global Proteome of "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "LonP1"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+/-"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": " Mouse Embryonal Fibroblasts Reveals Impact on Respiratory Chain, but No Interdependence between Eral1 and Mitoribosomes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms20184523"}], "href": "https://doi.org/10.3390/ijms20184523"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31547314"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31547314"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Catherine de Bournonville, Philippine Lemoine, Jean-Michel Foidart, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of membrane estrogen receptor alpha (ERα) in the rapid regulation of male sexual behavior."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neuroendocrinol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jne.13341"}], "href": "https://doi.org/10.1111/jne.13341"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37806316"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37806316"}]}]}]}
Proteins Z658B_HUMAN
NCBI Gene ID 401509
API
Download Associations
Predicted Functions View ZNF658B's ARCHS4 Predicted Functions.
Co-expressed Genes View ZNF658B's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ZNF658B's ARCHS4 Predicted Functions.

Functional Associations

ZNF658B has 403 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 21 datasets.

Click the + buttons to view associations for ZNF658B from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of ZNF658B gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of ZNF658B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores cellular components containing ZNF658B protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of ZNF658B gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Chemical Interactions chemicals interacting with ZNF658B gene/protein from the curated CTD Gene-Chemical Interactions dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores diseases co-occuring with ZNF658B gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of ZNF658B gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of ZNF658B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing ZNF658B from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of ZNF658B gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GO Molecular Function Annotations 2023 molecular functions performed by ZNF658B gene from the curated GO Molecular Function Annotations 2023 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of ZNF658B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ZNF658B gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles cell lines with high or low expression of ZNF658B gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of ZNF658B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of ZNF658B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of ZNF658B gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
Pathway Commons Protein-Protein Interactions interacting proteins for ZNF658B from the Pathway Commons Protein-Protein Interactions dataset.
Reactome Pathways 2014 pathways involving ZNF658B protein from the Reactome Pathways dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores tissues with high expression of ZNF658B protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores tissues co-occuring with ZNF658B protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.