Small molecules which mimic Human immunodeficiency virus infectious disease
Canned Analysis
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General Information
AccessionDCA00010018
TitleSmall molecules which mimic Human immunodeficiency virus infectious disease
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which mimic the Human immunodeficiency virus infectious disease gene expression signature in the Peripheral blood mononuclear cell cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d1c386e467bea600fb867a
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis CuratorJoel.Dudley
CREEDS IDdz:40
Cell TypePeripheral blood mononuclear cell
DO IDDOID:526
Disease NameHuman immunodeficiency virus infectious disease
Organismhuman
UMLS CUIC0019693
L1000CDS2 parameters
Directionmimic
Characteristic Direction parameters
Control SamplesGSM39104, GSM39105, GSM39106, GSM39107, GSM39108, GSM39109, GSM39110, GSM39111, GSM39112, GSM39113, GSM39114, GSM39115
Perturbed SamplesGSM39116, GSM39117, GSM39118, GSM39119, GSM39120, GSM39121, GSM39122, GSM39123, GSM39124, GSM39125, GSM39126, GSM39127, GSM39128, GSM39129, GSM39130, GSM39131, GSM39132, GSM39133, GSM39134, GSM39135, GSM39136, GSM39137, GSM39138, GSM39139, GSM39140, GSM39
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE2171
Gene Expression Omnibus
HIV-1 infection effect on peripheral blood mononuclear cells
7
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