Small molecules which reverse EMD KO
Canned Analysis
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General Information
AccessionDCA00020028
TitleSmall molecules which reverse EMD KO
DescriptionThe L1000 database was queried in order to identify small molecule perturbations which reverse the gene expression signature induced by EMD KO in the Gastrocnemius muscles (cardiotoxin, 4 d) cell type.
Analysis URLhttp://amp.pharm.mssm.edu/L1000CDS2/#/result/58d23ae5e467bea600fbbb32
Upload DateSeptember 20, 2017
Uploadermaayanlab
Metadata
Analysis Curatorgamalloponte
CREEDS IDgene:1202
Cell TypeGastrocnemius muscles (cardiotoxin, 4 d)
Gene Symbol (human)EMD
Gene Symbol (mouse)Emd
Organismmouse
Perturbation TypeKO
L1000CDS2 parameters
Directionreverse
Characteristic Direction parameters
Control SamplesGSM119603, GSM119607
Perturbed SamplesGSM119602, GSM119604, GSM119613
Tools used in the analysis
Dataset Accession
L1000CDS2
Published August 2016
An ultra-fast LINCS L1000 Characteristic Direction signature search engine
7756
Characteristic Direction
Published March 2014
A geometrical multivariate approach to identify differentially expressed genes
26829
Datasets used in the analysis
Keyword
Tool Name
GSE5304
Gene Expression Omnibus
Emery-Dreifuss muscular dystrophy model: regenerating skeletal muscle
42
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